Stanislav Y. Shvartsman

Also affiliated with Simons Foundation, Flatiron Health (United States), Flatiron Institute

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.379Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A novel ground truth dataset enables robust 3D nuclear instance segmentation in early mouse embryos

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.14.532646

Top 57%

0.275DataRank

Top 57%3 citations

Binglun Shao, Prateek Grover, Jaspreet Singh, Bradley Joyce, Rebecca Kim +9 more

Papers

Driven by 48 papers — median percentile 32. Top paper: “A novel ground truth dataset enables robust 3D nuclear instance segmentation in early mouse embryos”.

A novel ground truth dataset enables robust 3D nuclear instance segmentation in early mouse embryos

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.14.532646

Top 57%

0.275DataRank

Top 57%3 citations

Binglun Shao, Prateek Grover, Jaspreet Singh, Bradley Joyce, Rebecca Kim +9 more

From heterogeneous datasets to predictive models of embryonic development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.31.429006

Top 78%

0.104DataRank

Top 78%1 citations

Aleena L. Patel, Shannon E. Keenan, Stanislav Y. Shvartsman, Sayantan Dutta

Inference of Multisite Phosphorylation Rate Constants and Their Modulation by Pathogenic Mutations

Current Biology(2020)10.1016/j.cub.2019.12.052

N/A

0DataRank · unranked

21 citations

Sarah McFann, Lewis Marsh, Emilie Dufresne, Sarah Filippi, Heather A. Harrington +3 more

Optogenetic Rescue of a Patterning Mutant

Current Biology(2020)10.1016/j.cub.2020.06.059

N/A

0DataRank · unranked

44 citations

Nareg J.-V. Djabrayan, Stanislav Y. Shvartsman, Jared E. Toettcher, Heath E. Johnson

Excess dNTPs Trigger Oscillatory Surface Flow in the Early Drosophila Embryo

Biophysical Journal(2020)10.1016/j.bpj.2020.03.010

N/A

0DataRank · unranked

3 citations

Nareg J.-V. Djabrayan, Celia M. Smits, Clarence W. Rowley, Stanislav Y. Shvartsman, Sayantan Dutta

Evaluating the Simple Arrhenius Equation for the Temperature Dependence of Complex Developmental Processes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.17.208777

N/A

0DataRank · unranked

7 citations

Nishant Pappireddi, Meera Gupta, Stanislav Y. Shvartsman, Eric Wieschaus, Martin Wühr +1 more

Bidirectional communication in oogenesis: a dynamic conversation in mice and Drosophila

Trends in Cell Biology(2021)10.1016/j.tcb.2021.11.005

N/A

0DataRank · unranked

65 citations

Farners Amargant, Stanislav Y. Shvartsman, Francesca E. Duncan, Elizabeth R. Gavis, Caroline A. Doherty

Spatial organization of transcribing loci during early genome activation in Drosophila

Current Biology(2021)10.1016/j.cub.2021.09.027

N/A

0DataRank · unranked

48 citations

Peter H. Whitney, Sayantan Dutta, Stanislav Y. Shvartsman, Christine Rushlow, Shao-Kuei Huang

Mapping parameter spaces of biological switches

PLoS Computational Biology(2021)10.1371/journal.pcbi.1008711

N/A

0DataRank · unranked

13 citations

Lun Zhang, Marcio Gameiro, Justinn Barr, Jasmin Imran Alsous, Paul Schedl +3 more

Size scaling in collective cell growth

Development(2021)10.1242/dev.199663

N/A

0DataRank · unranked

12 citations

Caroline A. Doherty, Tomer Stern, Jasmin Imran Alsous, Stanislav Y. Shvartsman, Rocky Diegmiller

Molecular mechanisms underlying cellular effects of human MEK1 mutations

Molecular Biology of the Cell(2021)10.1091/mbc.e20-10-0625

N/A

0DataRank · unranked

11 citations

Liu Yang, Yogesh Goyal, Granton A. Jindal, Joshua L. Wetzel, Mona Singh +3 more

Capicua is a fast-acting transcriptional brake

Current Biology(2021)10.1016/j.cub.2021.05.061

N/A

0DataRank · unranked

10 citations

Lili Zhang, Shannon E. Keenan, Christine Rushlow, Cécile Fradin, Stanislav Y. Shvartsman +1 more

Clonal dominance in excitable cell networks

Nature Physics(2021)10.1038/s41567-021-01383-0

N/A

0DataRank · unranked

9 citations

Jan Rozman, Robert A. Marmion, Andrej Košmrlj, Stanislav Y. Shvartsman, Jasmin Imran Alsous

Collective oscillations of coupled cell cycles

Biophysical Journal(2021)10.1016/j.bpj.2021.06.029

N/A

0DataRank · unranked

3 citations

Rocky Diegmiller, Stanislav Y. Shvartsman, Binglun Shao

ERK signaling dissolves ERF Repression Condensates in Living Embryos

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.01.462829

N/A

0DataRank · unranked

1 citations

Aleena L. Patel, Stanislav Y. Shvartsman, Michael Levine, Nicholas Treen, Claire J. Weaver

An “individualist” model of an active genome in a developing embryo

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.08.425929

N/A

0DataRank · unranked

0 citations

Sayantan Dutta, Peter H. Whitney, Stanislav Y. Shvartsman, Christine Rushlow, Shao-Kuei Huang

Dynamics of Drosophila endoderm specification

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2112892119

N/A

0DataRank · unranked

13 citations

Maria Avdeeva, Liu Yang, Daniel S. Alber, Eric Wieschaus, Stanislav Y. Shvartsman +1 more

Forced and spontaneous symmetry breaking in cell polarization

Nature Computational Science(2022)10.1038/s43588-022-00295-0

N/A

0DataRank · unranked

12 citations

Daniel Fortunato, Cyrill B. Muratov, Leslie Greengard, Stanislav Y. Shvartsman, Pearson W. Miller

Quantitative models for building and growing fated small cell networks

Interface Focus(2022)10.1098/rsfs.2021.0082

N/A

0DataRank · unranked

9 citations

Hayden Nunley, Stanislav Y. Shvartsman, Jasmin Imran Alsous, Rocky Diegmiller

Mechanics of stabilized intercellular bridges

Biophysical Journal(2022)10.1016/j.bpj.2022.06.033

N/A

0DataRank · unranked

9 citations

Jasmin Imran Alsous, Krishna Garikipati, Stanislav Y. Shvartsman, Jaspreet Singh

Fusome topology and inheritance during insect gametogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.18.492500

N/A

0DataRank · unranked

1 citations

Jasmin Imran Alsous, Duojia Li, Yukiko Yamashita, Stanislav Y. Shvartsman, Rocky Diegmiller

Author Correction: Forced and spontaneous symmetry breaking in cell polarization

Nature Computational Science(2022)10.1038/s43588-022-00345-7

N/A

0DataRank · unranked

1 citations

Daniel Fortunato, Cyrill B. Muratov, Leslie Greengard, Stanislav Y. Shvartsman, Pearson W. Miller

A multifunctional Wnt regulator underlies the evolution of coat pattern in African striped mice

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.12.520043

N/A

0DataRank · unranked

1 citations

Sha Li, Christian F. Guerrero-Juarez, Pearson W. Miller, Benjamin J. Brack, Sarah A. Mereby +8 more

A dynamical model of growth and maturation in Drosophila

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2313224120

N/A

0DataRank · unranked

14 citations

Amirali Monshizadeh, Stanislav Y. Shvartsman, Alexander W. Shingleton, John J. Tyson

A multifunctional Wnt regulator underlies the evolution of rodent stripe patterns

Nature Ecology & Evolution(2023)10.1038/s41559-023-02213-7

N/A

0DataRank · unranked

23 citations

Sha Li, Christian F. Guerrero-Juarez, Pearson W. Miller, Benjamin J. Brack, Sarah A. Mereby +9 more

Maintaining symmetry during body axis elongation

Current Biology(2023)10.1016/j.cub.2023.07.050

N/A

0DataRank · unranked

22 citations

Sayantan Dutta, Vishank Jain-Sharma, Sebastian J. Streichan, Stanislav Y. Shvartsman, Celia M. Smits

Fusome topology and inheritance during insect gametogenesis

PLoS Computational Biology(2023)10.1371/journal.pcbi.1010875

N/A

0DataRank · unranked

13 citations

Jasmin Imran Alsous, Duojia Li, Yukiko Yamashita, Stanislav Y. Shvartsman, Rocky Diegmiller

Dynamics of an incoherent feedforward loop drive ERK-dependent pattern formation in the early Drosophila embryo

Development(2023)10.1242/dev.201818

N/A

0DataRank · unranked

10 citations

Harrison R. Oatman, Sarah McFann, Liu Yang, Heath E. Johnson, Stanislav Y. Shvartsman +2 more

Stochastic phenotypes in RAS-dependent developmental diseases

Current Biology(2023)10.1016/j.cub.2023.01.008

N/A

0DataRank · unranked

12 citations

Alison G. Simpkins, Lena A. Barrett, David W. Denberg, Susan Zusman, Jodi Schottenfeld-Roames +3 more

Evolutionary history of MEK1 illuminates the nature of deleterious mutations

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2304184120

N/A

0DataRank · unranked

5 citations

Robert A. Marmion, Stanislav Y. Shvartsman, Igor B. Zhulin, Ekaterina P. Andrianova

Phase plane dynamics of ERK phosphorylation

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105234

N/A

0DataRank · unranked

4 citations

Sarah McFann, Martin Wühr, Boris Rubinstein, Stanislav Y. Shvartsman

A model of replicating coupled oscillators generates naturally occurring cell networks

Development(2023)10.1242/dev.202187

N/A

0DataRank · unranked

4 citations

Stanislav Y. Shvartsman, Hayden Nunley, Matthew Smart

Self-organized intracellular twisters

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.04.534476

N/A

0DataRank · unranked

2 citations

Reza Farhadifar, Wen Lü, Gökberk Kabacaoğlu, Robert Blackwell, David B. Stein +5 more

Dynamics of an incoherent feedforward loop drive ERK-dependent pattern formation in the early Drosophila embryo

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.09.531972

N/A

0DataRank · unranked

0 citations

Harrison R. Oatman, Sarah McFann, Liu Yang, Heath E. Johnson, Stanislav Y. Shvartsman +2 more

Evolutionary history of MEK1 illuminates the nature of cancer and RASopathy mutations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.09.531944

N/A

0DataRank · unranked

0 citations

Robert A. Marmion, Stanislav Y. Shvartsman, Igor B. Zhulin, Ekaterina P. Andrianova

Nuclear instance segmentation and tracking for preimplantation mouse embryos

Development(2024)10.1242/dev.202817

N/A

0DataRank · unranked

19 citations

Binglun Shao, David Denberg, Prateek Grover, Jaspreet Singh, Maria Avdeeva +12 more

A tug-of-war between germ cell motility and intercellular bridges controls germline cyst formation in mice

Current Biology(2024)10.1016/j.cub.2024.10.062

N/A

0DataRank · unranked

19 citations

Isabella Leite, Bradley Joyce, Stanislav Y. Shvartsman, Eszter Pósfai, Ezra Levy

Cytoplasmic stirring by active carpets

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2405114121

N/A

0DataRank · unranked

13 citations

Manas Rachh, Stanislav Y. Shvartsman, Michael Shelley, Brato Chakrabarti

Computing whole embryo strain maps during gastrulation

Biophysical Journal(2024)10.1016/j.bpj.2024.10.003

N/A

0DataRank · unranked

7 citations

Xiaoxuan Zhang, Tomer Stern, Eric Wieschaus, Krishna Garikipati, Stanislav Y. Shvartsman +1 more

To be or not to be: orb, the fusome and oocyte specification in Drosophila

Genetics(2024)10.1093/genetics/iyae020

N/A

0DataRank · unranked

5 citations

Rocky Diegmiller, Megan M. Colonnetta, Wenfan Ke, Jasmin Imran Alsous, Tomer Stern +3 more

ERK synchronizes embryonic cleavages in Drosophila

Developmental Cell(2024)10.1016/j.devcel.2024.08.004

N/A

0DataRank · unranked

2 citations

Audrey Zhu, Javed M Aman, David Denberg, Marcus D. Kilwein, Robert A. Marmion +6 more

A live-cell biosensor of in vivo receptor tyrosine kinase activity reveals feedback regulation of a developmental gradient

Cell Reports(2025)10.1016/j.celrep.2025.115930

N/A

0DataRank · unranked

3 citations

Rebecca Kim, Alison G. Simpkins, Payam E. Farahani, Harrison R. Oatman, Eszter Pósfai +3 more

Formation of Drosophila germ cells requires spatial patterning of phospholipids

Current Biology(2025)10.1016/j.cub.2025.01.071

N/A

0DataRank · unranked

6 citations

Pearson W. Miller, Kwan Yin Lee, Miriam Osterfield, Alex Mogilner, Stanislav Y. Shvartsman +2 more

KINAID: an orthology-based kinase-substrate prediction and analysis tool for phosphoproteomics

Bioinformatics(2025)10.1093/bioinformatics/btaf300

N/A

0DataRank · unranked

5 citations

Audrey Zhu, Martin Wühr, Stanislav Y. Shvartsman, Mona Singh, Javed M Aman

Asymmetric coevolution of the MEK–ERK binding interface

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110708

N/A

0DataRank · unranked

1 citations

Robert A. Marmion, Stanislav Y. Shvartsman, Anton V. Persikov

Mechanics of a multilayer epithelium instruct tumour architecture and function

Nature(2020)10.1038/s41586-020-2695-9

N/A

0DataRank · unranked

164 citations

Matej Krajnc, Felipe García Quiroz, John M. Levorse, H. Amalia Pasolli, Stanislav Y. Shvartsman +2 more

Generative model for the first cell fate bifurcation in mammalian development

Development(2025)10.1242/dev.204717

N/A

0DataRank · unranked

2 citations

Madeleine Chalifoux, Bradley Joyce, Stanislav Y. Shvartsman, Eszter Pósfai, Maria Avdeeva

Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua

Developmental Cell(2020)10.1016/j.devcel.2020.02.004

N/A

0DataRank · unranked

56 citations

Shelby A. Blythe, Robert A. Marmion, Nareg J.-V. Djabrayan, Eric Wieschaus, Stanislav Y. Shvartsman +1 more

Stanislav Y. Shvartsman

Indexed papers

Top data-sharing exemplar

Papers