🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Valentine Svensson

Rapt Therapeutics (United States)

ORCID: 0000-0002-9217-2330
Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
10.2Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A multimodal cell census and atlas of the mammalian primary motor cortex

Nature(2021)10.1038/s41586-021-03950-0
Top 5%
4.3DataRank
Top 5%574 citations

BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Edward M. Callaway, Joseph R. Ecker, Z. Josh Huang, Ed S. Lein +252 more

Papers

Driven by 11 papers — median percentile 95. Top paper: “A Python library for probabilistic analysis of single-cell omics data”.

A Python library for probabilistic analysis of single-cell omics data

Nature Biotechnology(2022)10.1038/s41587-021-01206-w
N/A
9.4DataRank · unranked
825 citations

Romain Lopez, Galen Xing, Pierre Boyeau, Valeh Valiollah Pour Amiri, Justin Hong +24 more

A multimodal cell census and atlas of the mammalian primary motor cortex

Nature(2021)10.1038/s41586-021-03950-0
Top 5%
4.3DataRank
Top 5%574 citations

BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Edward M. Callaway, Joseph R. Ecker, Z. Josh Huang, Ed S. Lein +252 more

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Nature(2021)10.1038/s41586-021-03500-8
Top 5%
4.2DataRank
Top 5%389 citations

Julie A. Harris, Fangming Xie, Stephan Fischer, Ricky S. Adkins, Andrew I. Aldridge +81 more

scvi-tools: a library for deep probabilistic analysis of single-cell omics data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.28.441833
N/A
2.3DataRank · unranked
72 citations

Romain Lopez, Galen Xing, Pierre Boyeau, Katherine Wu, Michael Jayasuriya +20 more

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.29.970558
Top 13%
1.6DataRank
Top 13%63 citations

Julie A. Harris, Fangming Xie, Stephan Fischer, A. Sina Booeshaghi, Ricky S. Adkins +78 more

Defining and benchmarking open problems in single-cell analysis

Nature Biotechnology(2025)10.1038/s41587-025-02694-w
N/A
0.937DataRank · unranked
29 citations

Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Nikolay S. Markov, Luke Zappia +48 more

Defining and benchmarking open problems in single-cell analysis

Research Square(2024)10.21203/rs.3.rs-4181617/v1
N/A
0.603DataRank · unranked
17 citations

Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Daniel Strobl, Nikolay S. Markov +45 more

Protein velocity and acceleration from single-cell multiomics experiments

Genome biology(2020)10.1186/s13059-020-1945-3
N/A
0DataRank · unranked
98 citations

Valentine Svensson, Lior Pachter, Gennady Gorin

Reply to: UMI or not UMI, that is the question for scRNA-seq zero-inflation

Nature Biotechnology(2021)10.1038/s41587-020-00811-5
N/A
0DataRank · unranked
5 citations

Valentine Svensson

Interpretable factor models of single-cell RNA-seq via variational autoencoders

Bioinformatics(2020)10.1093/bioinformatics/btaa169
N/A
0DataRank · unranked
221 citations

Adam Gayoso, Nir Yosef, Lior Pachter, Valentine Svensson

Droplet scRNA-seq is not zero-inflated

Nature Biotechnology(2020)10.1038/s41587-019-0379-5
N/A
0DataRank · unranked
408 citations

Valentine Svensson