🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Ernesto A. B. F. Lima

The University of Texas at Austin

ORCID: 0000-0002-9219-8784
MathematicsMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “Integrating mechanism-based modeling with biomedical imaging to build practical digital twins for clinical oncology”.

Integrating mechanism-based modeling with biomedical imaging to build practical digital twins for clinical oncology

Biophysics Reviews(2022)10.1063/5.0086789
N/A
0DataRank · unranked
125 citations

Guillermo Lorenzo, David A. Hormuth, Ernesto A. B. F. Lima, Kalina P. Slavkova, Julie C. DiCarlo +6 more

Model selection for assessing the effects of doxorubicin on triple-negative breast cancer cell lines

Journal of Mathematical Biology(2022)10.1007/s00285-022-01828-x
N/A
0DataRank · unranked
5 citations

Ernesto A. B. F. Lima, Regina C. Almeida, Matthew T. McKenna, Thomas E. Yankeelov, Anna Claudia M. Resende

Bridging scales: A hybrid model to simulate vascular tumor growth and treatment response

Computer Methods in Applied Mechanics and Engineering(2023)10.1016/j.cma.2023.116566
N/A
0DataRank · unranked
8 citations

Ernesto A. B. F. Lima, J. Tinsley Oden, Barbara Wohlmuth, Tobias Duswald

Assessing the identifiability of model selection frameworks for the prediction of patient outcomes in the clinical breast cancer setting

Journal of Computational Science(2023)10.1016/j.jocs.2023.102006
N/A
0DataRank · unranked
7 citations

Ernesto A. B. F. Lima, Chengyue Wu, Angela M. Jarrett, Zijian Zhou, Nabil Elshafeey +4 more

Investigating tumor-host response dynamics in preclinical immunotherapy experiments using a stepwise mathematical modeling strategy

Mathematical Biosciences(2023)10.1016/j.mbs.2023.109106
N/A
0DataRank · unranked
3 citations

Patrick N. Song, Kirsten M. Reeves, Ernesto A. B. F. Lima, Benjamin M. Larimer, Thomas E. Yankeelov +2 more

Predicting response to combination evofosfamide and immunotherapy under hypoxic conditions in murine models of colon cancer

Mathematical Biosciences & Engineering(2023)10.3934/mbe.2023783
N/A
0DataRank · unranked
2 citations

Patrick N. Song, Kirsten M. Reeves, Benjamin M. Larimer, Anna G. Sorace, Thomas E. Yankeelov +1 more

MRI-based digital twins to improve treatment response of breast cancer by optimizing neoadjuvant chemotherapy regimens

npj Digital Medicine(2025)10.1038/s41746-025-01579-1
N/A
0DataRank · unranked
28 citations

Ernesto A. B. F. Lima, Casey E. Stowers, Zhan Xu, Clinton Yam, Jong Bum Son +4 more

A critical assessment of artificial intelligence in magnetic resonance imaging of cancer

npj Imaging(2025)10.1038/s44303-025-00076-0
N/A
0DataRank · unranked
13 citations

Meryem Abbad Andaloussi, David A. Hormuth, Ernesto A. B. F. Lima, Guillermo Lorenzo, Casey E. Stowers +8 more

Modeling tumor dynamics and predicting response to therapies in a murine pancreatic cancer model

npj Systems Biology and Applications(2025)10.1038/s41540-025-00593-z
N/A
0DataRank · unranked
1 citations

Hoon Choi, Mamta Gupta, Rong Zhou, Anna G. Sorace, Thomas E. Yankeelov +2 more

A Model for Teaching Machine Learning, Deep Learning, and Research Computing to Domain Scientists on HPC Resources

(2025)10.1145/3731599.3767380
N/A
0DataRank · unranked
1 citations

Kelsey M. Beavers, Erik Ferlanti, Lorenzo Concia, Joshua A. Urrutia, Ernesto A. B. F. Lima +10 more

Modeling tumor dynamics and predicting response to chemo-, targeted-, and immune-therapies in a murine model of pancreatic cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.03.631015
N/A
0DataRank · unranked
0 citations

Hoon Choi, Mamta Gupta, Rong Zhou, Anna G. Sorace, Thomas E. Yankeelov +2 more