🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Shiming Chen

St. John's University

ORCID: 0000-0002-9299-5767

Also affiliated with Washington University in St. Louis

Biochemistry, Genetics and Molecular BiologyNeuroscienceMedicineMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.619Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrated multi-omics single cell atlas of the human retina

Research Square(2023)10.21203/rs.3.rs-3471275/v1
Top 32%
0.619DataRank
Top 32%19 citations

Jin Li, Jun Wang, Ignacio Ibarra, Xuesen Cheng, Malte D. Luecken +19 more

Papers

Driven by 19 papers — median percentile 68. Top paper: “Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms”.

Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

eLife(2023)10.7554/elife.87147
N/A
0.786DataRank · unranked
22 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Integrated multi-omics single cell atlas of the human retina

Research Square(2023)10.21203/rs.3.rs-3471275/v1
Top 32%
0.619DataRank
Top 32%19 citations

Jin Li, Jun Wang, Ignacio Ibarra, Xuesen Cheng, Malte D. Luecken +19 more

Aberrant homeodomain–DNA cooperative dimerization underlies distinct developmental defects in two dominant CRX retinopathy models

Genome Research(2024)10.1101/gr.279340.124
N/A
0.265DataRank · unranked
4 citations

Gary D. Stormo, Shiming Chen, Yiqiao Zheng

Single-cell multiomics of the human retina reveals hierarchical transcription factor collaboration in mediating cell type-specific effects of genetic variants on gene regulation

Genome biology(2023)10.1186/s13059-023-03111-8
N/A
0DataRank · unranked
25 citations

Xuesen Cheng, Qingnan Liang, Leah A. Owen, Jiaxiong Lu, Yiqiao Zheng +6 more

Disease-causing mutations in genes encoding transcription factors critical for photoreceptor development

Frontiers in Molecular Neuroscience(2023)10.3389/fnmol.2023.1134839
N/A
0DataRank · unranked
15 citations

Shiming Chen, Chi Sun

Rho enhancers play unexpectedly minor roles in Rhodopsin transcription and rod cell integrity

Scientific Reports(2023)10.1038/s41598-023-39979-6
N/A
0DataRank · unranked
6 citations

Philip A. Ruzycki, Shiming Chen, Chi Sun

Pathogenic variants in Crx have distinct cis-regulatory effects on enhancers and silencers in photoreceptors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.27.542576
N/A
0DataRank · unranked
6 citations

Ryan Z. Friedman, Yiqiao Zheng, Chi Sun, Inez Y. Oh, David M. Granas +4 more

Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.01.526652
N/A
0DataRank · unranked
4 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

(2023)10.7554/elife.87147.2
N/A
0DataRank · unranked
2 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Cat LCA- CRX model, homozygous for an antimorphic mutation has a unique phenotype

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.01.530650
N/A
0DataRank · unranked
0 citations

Nicholas M. Tran, Shiming Chen, Simon M. Petersen‐Jones, Laurence M. Occelli

Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

(2023)10.7554/elife.87147.1
N/A
0DataRank · unranked
0 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Author Response: Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

(2023)10.7554/elife.87147.1.sa3
N/A
0DataRank · unranked
0 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Author Response: Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

(2023)10.7554/elife.87147.2.sa3
N/A
0DataRank · unranked
0 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms

(2023)10.7554/elife.87147.3
N/A
0DataRank · unranked
0 citations

Chi Sun, Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Yiqiao Zheng

Transcriptional precision in photoreceptor development and diseases – Lessons from 25 years of CRX research

Frontiers in Cellular Neuroscience(2024)10.3389/fncel.2024.1347436
N/A
0DataRank · unranked
14 citations

Shiming Chen, Yiqiao Zheng

Pathogenic variants in CRX have distinct cis -regulatory effects on enhancers and silencers in photoreceptors

Genome Research(2024)10.1101/gr.278133.123
N/A
0DataRank · unranked
14 citations

Ryan Z. Friedman, Yiqiao Zheng, Chi Sun, Inez Y. Oh, David M. Granas +4 more

Aberrant homeodomain-DNA cooperative dimerization underlies distinct developmental defects in two dominant CRX retinopathy models

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.12.584677
N/A
0DataRank · unranked
0 citations

Gary D. Stormo, Shiming Chen, Yiqiao Zheng

Essential Functions of MLL1 and MLL2 in Retinal Development and Cone Cell Maintenance

Frontiers in Cell and Developmental Biology(2022)10.3389/fcell.2022.829536
N/A
0DataRank · unranked
4 citations

Xiaodong Zhang, Philip A. Ruzycki, Shiming Chen, Chi Sun

Rho enhancers play unexpectedly minor roles in Rhodopsin transcription and rod cell integrity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.02.518920
N/A
0DataRank · unranked
0 citations

Philip A. Ruzycki, Shiming Chen, Chi Sun