Timothy I. Shaw

ORCID: 0000-0002-9316-1924

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 33 papers. Top paper: “Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer’s Disease Progression”.

Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer’s Disease Progression

Neuron(2020)10.1016/j.neuron.2019.12.015

N/A

7.9DataRank · unranked

616 citations

Xusheng Wang, Yuxin Li, Ping-Chung Chen, Kaiwen Yu, Kaushik Dey +29 more

Genetic and epigenetic features of bilateral Wilms tumor predisposition in patients from the Children’s Oncology Group AREN18B5-Q

Nature Communications(2023)10.1038/s41467-023-43730-0

N/A

0.778DataRank · unranked

31 citations

Changde Cheng, Justin Williams, Timothy I. Shaw, Emília M. Pinto, Karissa M. Dieseldorff Jones +29 more

Toxicoproteomic Profiling of hPXR Transgenic Mice Treated with Rifampicin and Isoniazid

Cells(2020)10.3390/cells9071654

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0DataRank · unranked

9 citations

Kiran Kodali, Jing Wu, Timothy I. Shaw, Junmin Peng, Taosheng Chen +1 more

Antitumor Effects of CAR T Cells Redirected to the EDB Splice Variant of Fibronectin

Cancer Immunology Research(2020)10.1158/2326-6066.cir-20-0280

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0DataRank · unranked

43 citations

Elizabeth Wickman, Timothy I. Shaw, Alejandro Allo Anido, Deanna Langfitt, Jinghui Zhang +6 more

JUMPm: A Tool for Large-Scale Identification of Metabolites in Untargeted Metabolomics

Metabolites(2020)10.3390/metabo10050190

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0DataRank · unranked

27 citations

Ji‐Hoon Cho, Suresh Poudel, Yuxin Li, Drew R. Jones, Timothy I. Shaw +4 more

The landscape of coding RNA editing events in pediatric cancer

BMC Cancer(2021)10.1186/s12885-021-08956-5

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0DataRank · unranked

24 citations

Michael Rusch, Samuel W. Brady, Ying Shao, Michael N. Edmonson, Timothy I. Shaw +8 more

Metabolomic and transcriptomic analysis reveals endogenous substrates and metabolic adaptation in rats lacking Abcg2 and Abcb1a transporters

PLoS ONE(2021)10.1371/journal.pone.0253852

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0DataRank · unranked

20 citations

David Finkelstein, Timothy I. Shaw, Ryan D. Michalek, Kimberly M. Zorn, Sean Ekins +6 more

Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)

Scientific Reports(2021)10.1038/s41598-021-84647-2

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0DataRank · unranked

13 citations

Li Dong, Liqing Tian, Chenxi Qian, Yu Liu, Bensheng Ju +19 more

CBFB-MYH11 fusion transcripts distinguish acute myeloid leukemias with distinct molecular landscapes and outcomes

Blood Advances(2021)10.1182/bloodadvances.2021004965

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0DataRank · unranked

11 citations

Jenny L. Smith, Yi‐Cheng Wang, Kassra Taghizadeh, Amanda R. Leonti, Rhonda E. Ries +19 more

Ablation of the endoplasmic reticulum stress kinase PERK induces paraptosis and type I interferon to promote anti-tumor T cell responses

Cancer Cell(2022)10.1016/j.ccell.2022.08.016

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0DataRank · unranked

161 citations

Shiun Chang, Eslam Mohamed, Rachel Jimenez, Rosa A. Sierra-Mondragon, Darwin Chang +17 more

Integrated stem cell signature and cytomolecular risk determination in pediatric acute myeloid leukemia

Nature Communications(2022)10.1038/s41467-022-33244-6

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0DataRank · unranked

49 citations

Jenny L. Smith, Jason E. Farrar, Yi‐Cheng Wang, Masayuki Umeda, Rhonda E. Ries +21 more

Tumor Expression Quantitative Trait Methylation Screening Reveals Distinct CpG Panels for Deconvolving Cancer Immune Signatures

Cancer Research(2022)10.1158/0008-5472.can-21-3113

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0DataRank · unranked

9 citations

Ling Cen, Y. Ann Chen, Joseph Markowitz, Timothy I. Shaw, Kenneth Y. Tsai +3 more

Comprehensive molecular and clinical characterization of NUP98 fusions in pediatric acute myeloid leukemia

Haematologica(2023)10.3324/haematol.2022.281653

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0DataRank · unranked

76 citations

Jenny L. Smith, Lauren Harmon, Rhonda E. Ries, Yi-Cheng J. Wang, Todd A. Alonzo +32 more

Etiology of oncogenic fusions in 5,190 childhood cancers and its clinical and therapeutic implication

Nature Communications(2023)10.1038/s41467-023-37438-4

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0DataRank · unranked

39 citations

Jonathon Klein, Richa Bajpai, Li Dong, Quang Tran, Pandurang Kolekar +28 more

Long Noncoding RNA Expression Independently Predicts Outcome in Pediatric Acute Myeloid Leukemia

Journal of Clinical Oncology(2023)10.1200/jco.22.01114

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0DataRank · unranked

30 citations

Jenny L. Smith, Megan Othus, Benjamin J. Huang, Yicheng Wang, Rhonda E. Ries +14 more

Bcl11b sustains multipotency and restricts effector programs of intestinal-resident memory CD8 + T cells

Science Immunology(2023)10.1126/sciimmunol.abn0484

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0DataRank · unranked

21 citations

Τόμας Ζελένκα, Valeriu B. Cismasiu, Shamima Islam, Leonardo Silvane, Béatrice Zitti +17 more

PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing

BMC Bioinformatics(2023)10.1186/s12859-023-05393-y

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0DataRank · unranked

9 citations

Darwin Chang, Gabrielle Nobles, Mingxiang Teng, Aik Choon Tan, Xuefeng Wang +9 more

The Genetic and Epigenetic Features of Bilateral Wilms Tumor Predisposition: A Report from the Children's Oncology Group AREN18B5-Q Study

Research Square(2023)10.21203/rs.3.rs-2675436/v1

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0DataRank · unranked

2 citations

Changde Cheng, Justin Williams, Timothy I. Shaw, Emília M. Pinto, Karissa Dieseldorff-Jones +29 more

Data from Antitumor Effects of CAR T Cells Redirected to the EDB Splice Variant of Fibronectin

(2023)10.1158/2326-6066.c.6550398

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0DataRank · unranked

0 citations

Elizabeth Wickman, Timothy I. Shaw, Alejandro Allo Anido, Deanna Langfitt, Jinghui Zhang +6 more

Data from Antitumor Effects of CAR T Cells Redirected to the EDB Splice Variant of Fibronectin

(2023)10.1158/2326-6066.c.6550398.v1

N/A

0DataRank · unranked

0 citations

Elizabeth Wickman, Timothy I. Shaw, Alejandro Allo Anido, Deanna Langfitt, Jinghui Zhang +6 more

A Lasso Cox score consisting of CTLA4+ regulatory T cells (Treg), monocytic myeloid derived suppressor cells (M-MDSC), and CXCR3+ CD8+ T cells: Association with adjuvant ipilimumab (ipi) survival outcomes in patients (pts) with high-risk melanoma.

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.e21557

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0DataRank · unranked

0 citations

Timothy I. Shaw, Sandra J. Lee, F. Stephen Hodi, Patrick Hwu, Dung‐Tsa Chen +7 more

Interleukin-1α release during necrotic-like cell death generates myeloid-driven immunosuppression that restricts anti-tumor immunity

Cancer Cell(2024)10.1016/j.ccell.2024.10.014

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0DataRank · unranked

59 citations

Jie Li, Achintyan Gangadharan, Xiaoxian Liu, Daiana P. Celias, Olabisi Osunmakinde +12 more

Jagged2 targeting in lung cancer activates anti-tumor immunity via Notch-induced functional reprogramming of tumor-associated macrophages

Immunity(2024)10.1016/j.immuni.2024.03.020

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0DataRank · unranked

33 citations

Rosa A. Sierra-Mondragon, Rachel V. Jimenez, Darwin Chang, Eslam Mohamed, Shiun Chang +23 more

IL-18R supported CAR T cells targeting oncofetal tenascin C for the immunotherapy of pediatric sarcoma and brain tumors

Journal for ImmunoTherapy of Cancer(2024)10.1136/jitc-2024-009743

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0DataRank · unranked

20 citations

Shannon Lange, Jessica Wagner, Jorge Ibañez-Vega, Liqing Tian, Meifen Lu +13 more

Discovery of immunotherapy targets for pediatric solid and brain tumors by exon-level expression

Nature Communications(2024)10.1038/s41467-024-47649-y

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0DataRank · unranked

25 citations

Jessica Wagner, Liqing Tian, Elizabeth Wickman, Suresh Poudel, Jian Wang +11 more

Discovery of immunotherapy targets for pediatric solid and brain tumors by exon-level expression

Research Square(2024)10.21203/rs.3.rs-3821632/v1

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0DataRank · unranked

0 citations

Jessica Wagner, Liqing Tian, Elizabeth Wickman, Suresh Poudel, Jian Wang +11 more

An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011873

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0DataRank · unranked

0 citations

Nancy Gillis, Chang Jiang, Anthony McCofie, Timothy I. Shaw, Aik Choon Tan +5 more

Mitigating T-cell mitochondrial dysfunction in CLL to augment CAR T-cell therapy: evaluation in an immunocompetent model

Blood Advances(2025)10.1182/bloodadvances.2024014822

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0DataRank · unranked

12 citations

Nienke B. Goedhart, Helga Simon‐Molas, Melanie Mediavilla-Varela, Angimar Uriepero-Palma, Fleur S. Peters +11 more

Effector T cells under hypoxia have an altered transcriptome similar to tumor-stressed T cells found in non-responsive melanoma patients

Journal for ImmunoTherapy of Cancer(2025)10.1136/jitc-2024-010153

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0DataRank · unranked

10 citations

Lourdes Plaza-Rojas, Justin C. Boucher, Elena V. Kostenko, Anna L Austin, Ahmad A. Tarhini +9 more

Lymphoma accelerates T cell and tissue aging

Cancer Cell(2025)10.1016/j.ccell.2025.07.023

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0DataRank · unranked

10 citations

Joshua Davis, Komal J Handoo, Aya G. Elmarsafawi, Anthony C. Augello, Chia‐Ho Cheng +21 more

SmartImpute is a targeted imputation framework for single-cell transcriptome data

Cell Reports Methods(2025)10.1016/j.crmeth.2025.101122

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0DataRank · unranked

2 citations

Tingyi Li, Joshua Davis, Timothy I. Shaw, Xiaoqing Yu, Xuefeng Wang +1 more

CAR T cell-driven induction of iNOS in tumor-associated macrophages promotes CAR T cell resistance in B cell lymphoma

Research Square(2025)10.21203/rs.3.rs-3481746/v1

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0DataRank · unranked

3 citations

Sae Bom Lee, Yun Pyo Kang, Justin C. Boucher, Jay K. Mandula, Emiliano Roselli +25 more

Cell-surface antigen profiling of pediatric brain tumors: B7-H3 is consistently expressed and can be targeted via local or systemic CAR T-cell delivery

Neuro-Oncology(2020)10.1093/neuonc/noaa278

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0DataRank · unranked

146 citations

Haley Houke, Jason Chiang, Zhongzhen Yi, Zelda Odé, Kenneth J. Caldwell +11 more