Justin J. J. van der Hooft

Also affiliated with Wageningen University & Research

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.3Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

Nucleic Acids Research(2022)10.1093/nar/gkac1049

Top 6%

3.8DataRank

Top 6%461 citations

Kai Blin, Jorge C. Navarro-Muñoz, Nicole E. Avalon, Marc G. Chevrette, Susan Egbert +77 more

Papers

Driven by 36 papers — median percentile 67. Top paper: “Feature-based molecular networking in the GNPS analysis environment”.

Feature-based molecular networking in the GNPS analysis environment

Nature Methods(2020)10.1038/s41592-020-0933-6

N/A

10.9DataRank · unranked

1581 citations

Daniel Petras, Robin Schmid, Kai Dührkop, Johannes Rainer, Abinesh Sarvepalli +57 more

Mass spectrometry searches using MASST

Nature Biotechnology(2020)10.1038/s41587-019-0375-9

N/A

6.2DataRank · unranked

298 citations

Alan K. Jarmusch, Fernando Vargas, Alexander A. Aksenov, Julia M. Gauglitz, Kelly C. Weldon +31 more

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

Nucleic Acids Research(2022)10.1093/nar/gkac1049

Top 6%

3.8DataRank

Top 6%461 citations

Kai Blin, Jorge C. Navarro-Muñoz, Nicole E. Avalon, Marc G. Chevrette, Susan Egbert +77 more

Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics

Nature Communications(2023)10.1038/s41467-023-44035-y

Top 15%

1.4DataRank

Top 15%82 citations

Nicole E. Avalon, Sydney P. Thomas, Sarvar A. Kakhkhorov, Alexander A. Aksenov, Paulo Wender Portal Gomes +27 more

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

Nature Protocols(2020)10.1038/s41596-020-0317-5

N/A

0.977DataRank · unranked

673 citations

Emily C. Gentry, Kerry L. McPhail, Louis‐Félix Nothias, Mélissa Nothias-Esposito, Amina Bouslimani +37 more

Auto-deconvolution and molecular networking of gas chromatography–mass spectrometry data

Nature Biotechnology(2020)10.1038/s41587-020-0700-3

N/A

0.769DataRank · unranked

167 citations

Ivan Laponogov, Zheng Zhang, Sophie Doran, Ilaria Belluomo, Dennis A. Veselkov +65 more

Reproducible mass spectrometry data processing and compound annotation in MZmine 3

Nature Protocols(2024)10.1038/s41596-024-00996-y

N/A

0.757DataRank · unranked

154 citations

Tito Damiani, Aleksandr Smirnov, Olena Mokshyna, Corinna Brungs, Ansgar Korf +14 more

Chemically informed analyses of metabolomics mass spectrometry data with Qemistree

Nature Chemical Biology(2020)10.1038/s41589-020-00677-3

N/A

0.710DataRank · unranked

113 citations

Yoshiki Vázquez‐Baeza, Julia M. Gauglitz, Mingxun Wang, Kai Dührkop, Mélissa Nothias-Esposito +15 more

Open Access Repository-Scale Propagated Nearest Neighbor Suspect Spectral Library for Untargeted Metabolomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.15.490691

Top 33%

0.597DataRank

Top 33%28 citations

Nicole E. Avalon, Sydney P. Thomas, Sarvar A. Kakhkhorov, Alexander A. Aksenov, Paulo Wender Portal Gomes +27 more

MITE: the Minimum Information about a Tailoring Enzyme database for capturing specialized metabolite biosynthesis

Nucleic Acids Research(2025)10.1093/nar/gkaf969

Top 49%

0.369DataRank

Top 49%9 citations

Daniel Probst, César Aguilar, Daniel Yuri Akiyama, Fabrizio Alberti, Hannah E. Augustijn +45 more

Reproducible mass spectrometry data processing and compound annotation in MZmine 3

ChemRxiv(2024)10.26434/chemrxiv-2023-98n6q-v2

N/A

0.269DataRank · unranked

5 citations

Steffen Heuckeroth, Aleksandr Smirnov, Olena Mokshyna, Corinna Brungs, Ansgar Korf +14 more

MITE: the Minimum Information about a Tailoring Enzyme database for capturing specialized metabolite biosynthesis

ChemRxiv(2025)10.26434/chemrxiv-2024-78mtl-v2

Top 78%

0.104DataRank

Top 78%1 citations

Daniel Probst, César Aguilar, Daniel Yuri Akiyama, Fabrizio Alberti, Hannah E. Augustijn +45 more

Advancements in capturing and mining mass spectrometry data are transforming natural products research

Natural Product Reports(2021)10.1039/d1np00040c

N/A

0DataRank · unranked

72 citations

Justin J. J. van der Hooft, Pieter C. Dorrestein, Alan K. Jarmusch, Scott A. Jarmusch

An isotopic labeling approach linking natural products with biosynthetic gene clusters

Nature Chemical Biology(2021)10.1038/s41589-021-00949-6

N/A

0DataRank · unranked

38 citations

Jeffrey A. van Santen, Justin J. J. van der Hooft, Marnix H. Medema, Roger G. Linington, Catherine S. McCaughey

Chemical Gradients of Plant Substrates in an Atta texana Fungus Garden

mSystems(2021)10.1128/msystems.00601-21

N/A

0DataRank · unranked

6 citations

Sara P. Puckett, Kathleen E. Kyle, Daniel Petras, Ricardo Silva, Louis‐Félix Nothias +8 more

NPOmix: a machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.05.463235

N/A

0DataRank · unranked

5 citations

Mingxun Wang, Ricardo Silva, Alexey Gurevich, Anelize Bauermeister, Paulo Wender Portal Gomes +13 more

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

Journal of Natural Products(2021)10.1021/acs.jnatprod.1c00399

N/A

0DataRank · unranked

509 citations

Mingxun Wang, Christopher A. Leber, Louis‐Félix Nothias, Raphael Reher, Kyo Bin Kang +5 more

Comparison of Cosine, Modified Cosine, and Neutral Loss Based Spectrum Alignment For Discovery of Structurally Related Molecules

Journal of the American Society for Mass Spectrometry(2022)10.1021/jasms.2c00153

N/A

0DataRank · unranked

83 citations

Robin Schmid, Florian Huber, Justin J. J. van der Hooft, Mingxun Wang, Pieter C. Dorrestein +1 more

NPOmix: A machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters

PNAS Nexus(2022)10.1093/pnasnexus/pgac257

N/A

0DataRank · unranked

28 citations

Mingxun Wang, Ricardo Silva, Alexey Gurevich, Anelize Bauermeister, Paulo Wender Portal Gomes +13 more

The ant fungus garden acts as an external digestive system

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.18.389361

N/A

0DataRank · unranked

0 citations

Sara P. Puckett, Kathleen E. Kyle, Daniel Petras, Ricardo Silva, Louis‐Félix Nothias +8 more

Comparison of Cosine, Modified Cosine, and Neutral Loss Based Spectrum Alignment For Discovery of Structurally Related Molecules

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.01.494370

N/A

0DataRank · unranked

8 citations

Robin Schmid, Florian Huber, Justin J. J. van der Hooft, Mingxun Wang, Pieter C. Dorrestein +1 more

Trachymyrmex septentrionalis ants promote fungus garden hygiene using Trichoderma -derived metabolite cues

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.12.516288

N/A

0DataRank · unranked

1 citations

Sara P. Puckett, Andrés Mauricio Caraballo‐Rodríguez, José Rivera‐Chávez, Robert M. Samples, Cody E. Earp +10 more

Artificial intelligence for natural product drug discovery

Nature Reviews Drug Discovery(2023)10.1038/s41573-023-00774-7

N/A

0DataRank · unranked

407 citations

Katherine Duncan, Somayah S. Elsayed, Neha Garg, Justin J. J. van der Hooft, Nathaniel I. Martin +53 more

Chemically-informed Analyses of Metabolomics Mass Spectrometry Data with Qemistree

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.04.077636

N/A

0DataRank · unranked

17 citations

Yoshiki Vázquez‐Baeza, Julia M. Gauglitz, Mingxun Wang, Kai Dührkop, Mélissa Nothias-Esposito +14 more

Recent advances in mass spectrometry-based computational metabolomics

Current Opinion in Chemical Biology(2023)10.1016/j.cbpa.2023.102288

N/A

0DataRank · unranked

65 citations

Justin J. J. van der Hooft, Haley Chatelaine, Corey D. Broeckling, Nicola Zamboni, Soha Hassoun +2 more

Trachymyrmex septentrionalis ants promote fungus garden hygiene using Trichoderma -derived metabolite cues

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2219373120

N/A

0DataRank · unranked

19 citations

Sara P. Puckett, Andrés Mauricio Caraballo‐Rodríguez, José Rivera‐Chávez, Robert M. Samples, Cody E. Earp +10 more

The Hitchhiker’s Guide to Statistical Analysis of Feature-based Molecular Networks from Non-Targeted Metabolomics Data

Socio-Environmental Systems Modeling(2023)10.26434/chemrxiv-2023-wwbt0

N/A

0DataRank · unranked

15 citations

Axel Walter, Filip Ottosson, Francesco Russo, Marcelo Navarro-Díaz, Judith Boldt +52 more

Mass spectrometry data processing in MZmine 3: feature detection and annotation

Socio-Environmental Systems Modeling(2023)10.26434/chemrxiv-2023-98n6q

N/A

0DataRank · unranked

12 citations

Steffen Heuckeroth, Aleksandr Smirnov, Olena Mokshyna, Corinna Brungs, Ansgar Korf +14 more

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

ChemRxiv(2020)10.26434/chemrxiv.12885494

N/A

0DataRank · unranked

28 citations

Mingxun Wang, Christopher A. Leber, Louis‐Félix Nothias, Raphael Reher, Kyo Bin Kang +5 more

MassSpecGym: A benchmark for the discovery and identification of molecules

Socio-Environmental Systems Modeling(2024)10.52202/079017-3491

N/A

0DataRank · unranked

16 citations

Anton Bushuiev, Niek De Jonge, Fleming Kretschmer, Raman Samusevich, Janne Heirman +20 more

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

ChemRxiv(2020)10.26434/chemrxiv.12885494.v1

N/A

0DataRank · unranked

38 citations

Mingxun Wang, Christopher A. Leber, Louis‐Félix Nothias, Raphael Reher, Kyo Bin Kang +5 more

antiSMASH 8.0: extended gene cluster detection capabilities and analyses of chemistry, enzymology, and regulation

Nucleic Acids Research(2025)10.1093/nar/gkaf334

N/A

0DataRank · unranked

511 citations

Simon J. Shaw, Lisa Vader, Judit Szenei, Zachary L. Reitz, Hannah E. Augustijn +22 more

A universal language for finding mass spectrometry data patterns

Nature Methods(2025)10.1038/s41592-025-02660-z

N/A

0DataRank · unranked

49 citations

Alan K. Jarmusch, Allegra T. Aron, Daniel Petras, Vanessa V. Phelan, Haoqi Nina Zhao +69 more

Linking genomics and metabolomics to chart specialized metabolic diversity

Chemical Society Reviews(2020)10.1039/d0cs00162g

N/A

0DataRank · unranked

223 citations

Hosein Mohimani, Anelize Bauermeister, Pieter C. Dorrestein, Katherine Duncan, Marnix H. Medema +1 more

Multilaboratory Untargeted Mass Spectrometry Metabolomics Collaboration to Identify Bottlenecks and Comprehensively Annotate A Single Dataset

Analytical Chemistry(2025)10.1021/acs.analchem.4c05577

N/A

0DataRank · unranked

8 citations

Preston K. Manwill, Armando Alcázar Magaña, Victoria M. Anderson, Mehdi A. Beniddir, Samuel Bertrand +19 more

ReDU: a framework to find and reanalyze public mass spectrometry data

Nature Methods(2020)10.1038/s41592-020-0916-7

N/A

0DataRank · unranked

141 citations

Mingxun Wang, Christine M. Aceves, Rohit S. Advani, Shaden Aguirre, Alexander A. Aksenov +39 more

Justin J. J. van der Hooft

Indexed papers

Top data-sharing exemplar

Papers