Ilya J. Finkelstein

Division of Molecular & Cellular Biosciences

Also affiliated with Institut de Biologie Moléculaire et Cellulaire, The University of Texas at Austin

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 35 papers. Top paper: “Structure-based design of prefusion-stabilized SARS-CoV-2 spikes”.

Structure-based design of prefusion-stabilized SARS-CoV-2 spikes

Science(2020)10.1126/science.abd0826

N/A

1.1DataRank · unranked

1404 citations

Jory A. Goldsmith, Jeffrey M. Schaub, Andrea M. DiVenere, Hung-Che Kuo, Kamyab Javanmardi +19 more

Massively Parallel Selection of NanoCluster Beacons

Advanced Materials(2022)10.1002/adma.202204957

N/A

0.489DataRank · unranked

25 citations

Cheulhee Jung, Yu‐An Chen, Hung‐Che Kuo, Oliver Zhao, Trung D. Nguyen +12 more

DNA-dependent protein kinase promotes DNA end processing by MRN and CtIP

Science Advances(2020)10.1126/sciadv.aay0922

N/A

0DataRank · unranked

151 citations

Logan R. Myler, Michael M. Soniat, Nodar Makharashvili, Linda Lee, Susan P. Lees‐Miller +3 more

Massively parallel kinetic profiling of natural and engineered CRISPR nucleases

Nature Biotechnology(2020)10.1038/s41587-020-0646-5

N/A

0DataRank · unranked

144 citations

John A. Hawkins, Nicole V. Johnson, Cheulhee Jung, Kuang Hu, James R. Rybarski +5 more

Molecular Architecture of Early Dissemination and Massive Second Wave of the SARS-CoV-2 Virus in a Major Metropolitan Area

mBio(2020)10.1128/mbio.02707-20

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0DataRank · unranked

141 citations

Randall J. Olsen, Paul A. Christensen, David W. Bernard, James J. Davis, Maulik Shukla +20 more

RADX condenses single-stranded DNA to antagonize RAD51 loading

Nucleic Acids Research(2020)10.1093/nar/gkaa559

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0DataRank · unranked

23 citations

Jeffrey M. Schaub, Ilya J. Finkelstein, Hongshan Zhang

Structure-based Design of Prefusion-stabilized SARS-CoV-2 Spikes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.30.125484

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0DataRank · unranked

190 citations

Jory A. Goldsmith, Jeffrey M. Schaub, Andrea M. DiVenere, Hung‐Che Kuo, Kamyab Javanmardi +17 more

RADX condenses single-stranded DNA to antagonize RAD51 loading

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.098996

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0DataRank · unranked

1 citations

Jeffrey M. Schaub, Ilya J. Finkelstein, Hongshan Zhang

CRISPR-guided programmable self-assembly of artificial virus-like nucleocapsids

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.17.343996

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0DataRank · unranked

1 citations

Ilya J. Finkelstein, Armando T. Hernández-García, Carlos Calcines-Cruz

Expression and characterization of SARS-CoV-2 spike proteins

Nature Protocols(2021)10.1038/s41596-021-00623-0

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0DataRank · unranked

61 citations

Chia‐Wei Chou, Hung‐Che Kuo, Kamyab Javanmardi, Ching‐Lin Hsieh, Jory A. Goldsmith +15 more

Sequence Analysis of 20,453 Severe Acute Respiratory Syndrome Coronavirus 2 Genomes from the Houston Metropolitan Area Identifies the Emergence and Widespread Distribution of Multiple Isolates of All Major Variants of Concern

American Journal Of Pathology(2021)10.1016/j.ajpath.2021.03.004

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0DataRank · unranked

52 citations

Randall J. Olsen, Paul Christensen, Sishir Subedi, Robert Olson, James J. Davis +10 more

Characterization of the T4 gp32–ssDNA complex by native, cross-linking, and ultraviolet photodissociation mass spectrometry

Chemical Science(2021)10.1039/d1sc02861h

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0DataRank · unranked

20 citations

Jada N. Walker, Jeffrey M. Schaub, Ilya J. Finkelstein, Jennifer S. Brodbelt, Molly S. Blevins

Synthetic repertoires derived from convalescent COVID-19 patients enable discovery of SARS-CoV-2 neutralizing antibodies and a novel quaternary binding modality

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.07.438849

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0DataRank · unranked

15 citations

Ching‐Lin Hsieh, Andrew P. Horton, Elizabeth C. Gardner, Foteini Bartzoka, Nianshuang Wang +35 more

In Diverse Conditions Intrinsic Chromatin Condensates Have Liquid-like Material Properties

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.22.469620

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0DataRank · unranked

7 citations

Claudia Blaukopf, Tracy Lou, Lynda K. Doolittle, Ilya J. Finkelstein, Geeta J. Narlikar +3 more

Mechanism of broad-spectrum Cas9 inhibition by AcrIIA11

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.15.460536

N/A

0DataRank · unranked

3 citations

Cynthia I. Terrace, Kamyab Javanmardi, Wantae Kim, Kevin J. Forsberg, Ilya J. Finkelstein +1 more

Polymerase theta-helicase promotes end joining by stripping single-stranded DNA-binding proteins and bridging DNA ends

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.03.446937

N/A

0DataRank · unranked

2 citations

Michael M. Soniat, Ilya J. Finkelstein, Jeffrey M. Schaub

Prevalent, protective, and convergent IgG recognition of SARS-CoV-2 non-RBD spike epitopes

UNC Libraries(2021)10.17615/jab8-r027

N/A

0DataRank · unranked

0 citations

William N. Voss, Daniel R. Boutz, Jin Eyun Kim, Maria D. Person, Yixuan J. Hou +33 more

Compartmentalization of telomeres through DNA-scaffolded phase separation

Developmental Cell(2022)10.1016/j.devcel.2021.12.017

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0DataRank · unranked

75 citations

Yoonji Kim, Amy R. Strom, Daniel S.W. Lee, Byron C. Williams, Jeffrey M. Schaub +6 more

Polymerase theta-helicase promotes end joining by stripping single-stranded DNA-binding proteins and bridging DNA ends

Nucleic Acids Research(2022)10.1093/nar/gkac119

N/A

0DataRank · unranked

52 citations

Michael M. Soniat, Ilya J. Finkelstein, Jeffrey M. Schaub

How Glutamate Promotes Liquid-liquid Phase Separation and DNA Binding Cooperativity of E. coli SSB Protein

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167562

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0DataRank · unranked

50 citations

Xian Cheng, Hongshan Zhang, Min Kyung Shinn, Elizabeth Weiland, Binh Nguyen +6 more

The MRN complex and topoisomerase IIIa–RMI1/2 synchronize DNA resection motor proteins

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102802

N/A

0DataRank · unranked

15 citations

Giaochau Nguyen, Hung‐Che Kuo, Ilya J. Finkelstein, Michael M. Soniat

How Glutamate Promotes Liquid-liquid Phase Separation and DNA Binding Cooperativity of E. coli SSB Protein

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.17.476650

N/A

0DataRank · unranked

4 citations

Xian Cheng, Hongshan Zhang, Min Kyung Shinn, Elizabeth Weiland, Binh Nguyen +6 more

DNA capture and loop extrusion dynamics by cohesin-NIPBL

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.18.504320

N/A

0DataRank · unranked

1 citations

Zhubing Shi, Xiaotong Lu, Hongshan Zhang, Ilya J. Finkelstein, Yizhi Jane Tao +3 more

How does cohesin organize the 3D genome?

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.0i131

N/A

0DataRank · unranked

0 citations

Hongshan Zhang, Zhubing Shi, Yoori Kim, Hongtao Yu, Xiao‐chen Bai +1 more

MRN and Topoisomerase IIIα-RMI1/2 synchronize DNA resection motor proteins

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.01.498452

N/A

0DataRank · unranked

0 citations

Giaochau Nguyen, Hung‐Che Kuo, Ilya J. Finkelstein, Michael M. Soniat

CTCF and R-loops are boundaries of cohesin-mediated DNA looping

Molecular Cell(2023)10.1016/j.molcel.2023.07.006

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0DataRank · unranked

103 citations

Zhubing Shi, Edward J. Banigan, Yoori Kim, Hongtao Yu, Xiao‐chen Bai +2 more

High-speed AFM imaging reveals DNA capture and loop extrusion dynamics by cohesin-NIPBL

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105296

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0DataRank · unranked

15 citations

Xiaotong Lu, Qi Xu, Elizabeth Marie Irvin, Colette Pappas, Hongshan Zhang +6 more

Unraveling the mechanisms of PAMless DNA interrogation by SpRY Cas9

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.22.546082

N/A

0DataRank · unranked

9 citations

Jack P. K. Bravo, Hongshan Zhang, Tyler L. Dangerfield, Ilya J. Finkelstein, Kenneth A. Johnson +2 more

Massively Parallel Profiling of RNA-targeting CRISPR-Cas13d

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.27.534188

N/A

0DataRank · unranked

3 citations

Joshua Prupes, Chia‐Wei Chou, Ilya J. Finkelstein, Hung‐Che Kuo

Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9

Nature Communications(2024)10.1038/s41467-024-47830-3

N/A

0DataRank · unranked

59 citations

Jack P. K. Bravo, M HOOPER, Tyler L. Dangerfield, Hongshan Zhang, Ilya J. Finkelstein +3 more

Massively parallel profiling of RNA-targeting CRISPR-Cas13d

Nature Communications(2024)10.1038/s41467-024-44738-w

N/A

0DataRank · unranked

28 citations

Joshua Prupes, Chia‐Wei Chou, Ilya J. Finkelstein, Hung‐Che Kuo

Kinetic dissection of pre-crRNA binding and processing by CRISPR–Cas12a

RNA(2024)10.1261/rna.080088.124

N/A

0DataRank · unranked

8 citations

N. Appleby, Chia‐Wei Chou, Ilya J. Finkelstein, Rick Russell, Selma Sinan

Mechanism of Cas9 inhibition by AcrIIA11

Nucleic Acids Research(2025)10.1093/nar/gkaf318

N/A

0DataRank · unranked

6 citations

Hongshan Zhang, Lianne Z Dubbs, Chia‐Wei Chou, Cynthia I. Terrace, Kamyab Javanmardi +4 more

Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.25.678047

N/A

0DataRank · unranked

0 citations

John P Cooper, Can Goksal, Jasbeer Singh Khanduja, Richard Joh, Johannes J Groos +7 more

HEDGES error-correcting code for DNA storage corrects indels and allows sequence constraints

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2004821117

N/A

0DataRank · unranked

179 citations

John A. Hawkins, Stephen K. Jones, Jeffrey M. Schaub, Ilya J. Finkelstein, William H. Press