Patrick D. Hsu

Also affiliated with Activated Research Company (United States), Arc Research Institute, University of California, Berkeley

Biochemistry, Genetics and Molecular BiologyMedicineChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 26 papers. Top paper: “Evaluation of SARS-CoV-2 serology assays reveals a range of test performance”.

Evaluation of SARS-CoV-2 serology assays reveals a range of test performance

Nature Biotechnology(2020)10.1038/s41587-020-0659-0

N/A

15.0DataRank · unranked

299 citations

Joseph Hiatt, Cody T. Mowery, Brian R. Shy, Ruby Yu, Tori N. Yamamoto +67 more

How to build the virtual cell with artificial intelligence: Priorities and opportunities

Cell(2024)10.1016/j.cell.2024.11.015

N/A

0.861DataRank · unranked

310 citations

Yusuf Roohani, Yanay Rosen, Ankit Gupta, Xikun Zhang, Marcel Roed +37 more

Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome

Nature Biotechnology(2022)10.1038/s41587-022-01494-w

N/A

0.803DataRank · unranked

210 citations

Alison Fanton, Josh Tycko, Michaela M. Hinks, Sita S. Chandrasekaran, Nicholas T. Perry +8 more

Structural mechanism of bridge RNA-guided recombination

Nature(2024)10.1038/s41586-024-07570-2

N/A

0.624DataRank · unranked

63 citations

Nicholas T. Perry, Matthew G. Durrant, Teppei Soma, Naoto Nagahata, Sae Okazaki +9 more

Genome-wide, bidirectional CRISPR screens identify mucins as critical host factors modulating SARS-CoV-2 infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.22.440848

N/A

0.510DataRank · unranked

29 citations

Sylvia A. Sarnik, Eleanor Wang, James Zengel, Varun Sathyan, Xammy Nguyenla +15 more

Translocon-associated Protein Subunit SSR3 Determines and Predicts Susceptibility to Paclitaxel in Breast Cancer and Glioblastoma

Clinical Cancer Research(2022)10.1158/1078-0432.ccr-21-2563

N/A

0.492DataRank · unranked

14 citations

Aarón Sonabend, Víctor A. Arrieta, Daniel Y. Zhang, Deepak Kanojia, Li Chen +16 more

Strategies for effectively modelling promoter-driven gene expression using transfer learning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.24.529941

N/A

0.385DataRank · unranked

12 citations

Michael H. Herschl, Xinyang Geng, Sathvik Kolli, Amy X. Lu, Aviral Kumar +4 more

Deep learning and CRISPR-Cas13d ortholog discovery for optimized RNA targeting

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.14.460134

N/A

0DataRank · unranked

18 citations

Peter Lotfy, Kian Faizi, Sara Baungaard, Emily A. Gibson, Eleanor Wang +9 more

Large-scale discovery of recombinases for integrating DNA into the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.05.467528

N/A

0DataRank · unranked

10 citations

Alison Fanton, Josh Tycko, Michaela M. Hinks, Sita S. Chandrasekaran, Nicholas T. Perry +8 more

Publisher Correction: Accelerated RNA detection using tandem CRISPR nucleases

Nature Chemical Biology(2021)10.1038/s41589-021-00882-8

N/A

0DataRank · unranked

8 citations

Gavin J. Knott, Dylan C. J. Smock, John J. Desmarais, Sungmin Son, Abdul Bhuiya +43 more

Genome-wide bidirectional CRISPR screens identify mucins as host factors modulating SARS-CoV-2 infection

Nature Genetics(2022)10.1038/s41588-022-01131-x

N/A

0DataRank · unranked

144 citations

Sylvia A. Sarnik, Eleanor Wang, James Zengel, Sarah R. Leist, Alexandra Schäfer +45 more

Rapid detection of SARS-CoV-2 RNA in saliva via Cas13

Nature Biomedical Engineering(2022)10.1038/s41551-022-00917-y

N/A

0DataRank · unranked

143 citations

Shreeya Agrawal, Alison Fanton, Aditya R. Jangid, Bérénice Charrez, Arturo M. Escajeda +44 more

Kinase-independent activity of DYRK1A promotes viral entry of highly pathogenic human coronaviruses

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.13.507833

N/A

0DataRank · unranked

0 citations

Wesley L. Cai, Jin Wei, Mia Madel Alfajaro, Renata B. Filler, Scott B. Biering +15 more

Deep learning and CRISPR-Cas13d ortholog discovery for optimized RNA targeting

Cell Systems(2023)10.1016/j.cels.2023.11.006

N/A

0DataRank · unranked

64 citations

Peter Lotfy, Kian Faizi, Sara Baungaard, Emily A. Gibson, Eleanor Wang +10 more

Checkpoint kinase 1/2 inhibition potentiates anti-tumoral immune response and sensitizes gliomas to immune checkpoint blockade

Nature Communications(2023)10.1038/s41467-023-36878-2

N/A

0DataRank · unranked

47 citations

Junfei Zhao, Li Chen, Andrew Gould, Brandyn Castro, Víctor A. Arrieta +22 more

DYRK1A promotes viral entry of highly pathogenic human coronaviruses in a kinase-independent manner

PLoS Biology(2023)10.1371/journal.pbio.3002097

N/A

0DataRank · unranked

27 citations

Wesley L. Cai, Jin Wei, Mia Madel Alfajaro, Renata B. Filler, Scott B. Biering +16 more

The KDM6A-KMT2D-p300 axis regulates susceptibility to diverse coronaviruses by mediating viral receptor expression

PLoS Pathogens(2023)10.1371/journal.ppat.1011351

N/A

0DataRank · unranked

9 citations

Mia Madel Alfajaro, Wesley L. Cai, Vincent R. Graziano, Madison S. Strine, Renata B. Filler +11 more

Bridge RNAs direct programmable recombination of target and donor DNA

Nature(2024)10.1038/s41586-024-07552-4

N/A

0DataRank · unranked

134 citations

Nicholas T. Perry, James J. Pai, Aditya R. Jangid, Januka S. Athukoralage, Masahiro Hiraizumi +6 more

Bridge RNAs direct modular and programmable recombination of target and donor DNA

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.24.577089

N/A

0DataRank · unranked

7 citations

Nicholas T. Perry, James J. Pai, Aditya R. Jangid, Januka S. Athukoralage, Masahiro Hiraizumi +6 more

Designing Cell-Type-Specific Promoter Sequences Using Conservative Model-Based Optimization

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.23.600232

N/A

0DataRank · unranked

6 citations

Xinyang Geng, Michael H. Herschl, Sathvik Kolli, Aviral Kumar, Patrick D. Hsu +3 more

Programmable RNA Targeting Using CasRx in Flies

The CRISPR Journal(2020)10.1089/crispr.2020.0018

N/A

0DataRank · unranked

99 citations

Dan J. Brogan, Ruichen Sun, Ting Yang, Patrick D. Hsu, Omar S. Akbari +1 more

Ribosomal protein S11 influences glioma response to TOP2 poisons

Oncogene(2020)10.1038/s41388-020-1342-0

N/A

0DataRank · unranked

34 citations

Li Chen, Mukesh Bansal, Aayushi Mahajan, Jan Winter, Meeki Lad +18 more

Rapid, point-of-care molecular diagnostics with Cas13

medRxiv(2020)10.1101/2020.12.14.20247874

N/A

0DataRank · unranked

21 citations

Alison Fanton, Sita S. Chandrasekaran, Bérénice Charrez, Arturo M. Escajeda, Sungmin Son +26 more

Programmable RNA Targeting using CasRx in Flies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.03.023606

N/A

0DataRank · unranked

5 citations

Dan J. Brogan, Ruichen Sun, Ting Yang, Patrick D. Hsu, Omar S. Akbari +1 more

Accelerated RNA detection using tandem CRISPR nucleases

Nature Chemical Biology(2021)10.1038/s41589-021-00842-2

N/A

0DataRank · unranked

265 citations

Gavin J. Knott, Dylan C. J. Smock, John J. Desmarais, Sungmin Son, Abdul Bhuiya +43 more

Accelerated RNA detection using tandem CRISPR nucleases

medRxiv(2021)10.1101/2021.03.19.21253328

N/A

0DataRank · unranked

21 citations

Gavin J. Knott, Dylan C. J. Smock, John J. Desmarais, Sungmin Son, Abdul Bhuiya +29 more