John A. Onofrey

MedicineComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.822Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

LiverHccSeg: A publicly available multiphasic MRI dataset with liver and HCC tumor segmentations and inter-rater agreement analysis

Data in Brief(2023)10.1016/j.dib.2023.109662

Top 25%

0.822DataRank

Top 25%20 citations

Sandeep Arora, Steffen Huber, Ahmet S. Kücükkaya, John A. Onofrey, Moritz Gross

Papers

Driven by 29 papers — median percentile 75. Top paper: “LiverHccSeg: A publicly available multiphasic MRI dataset with liver and HCC tumor segmentations and inter-rater agreement analysis”.

LiverHccSeg: A publicly available multiphasic MRI dataset with liver and HCC tumor segmentations and inter-rater agreement analysis

Data in Brief(2023)10.1016/j.dib.2023.109662

Top 25%

0.822DataRank

Top 25%20 citations

Sandeep Arora, Steffen Huber, Ahmet S. Kücükkaya, John A. Onofrey, Moritz Gross

Noise reduction with cross-tracer and cross-protocol deep transfer learning for low-dose PET

Physics in Medicine and Biology(2020)10.1088/1361-6560/abae08

N/A

0DataRank · unranked

38 citations

Jing Wu, Wenzhuo Lu, John A. Onofrey, Yi-Hwa Liu, Chi Liu +1 more

Generation of synthetic PET images of synaptic density and amyloid from 18F‐FDG images using deep learning

Medical Physics(2021)10.1002/mp.15073

N/A

0DataRank · unranked

26 citations

Hui Liu, Takuya Toyonaga, Luyao Shi, Jing Wu, John A. Onofrey +11 more

Improved performance and consistency of deep learning 3D liver segmentation with heterogeneous cancer stages in magnetic resonance imaging

PLoS ONE(2021)10.1371/journal.pone.0260630

N/A

0DataRank · unranked

15 citations

Michael Spektor, Ariel Jaffe, Ahmet S. Kücükkaya, Simon Iseke, Stefan P. Haider +4 more

Co-attention spatial transformer network for unsupervised motion tracking and cardiac strain analysis in 3D echocardiography

Medical Image Analysis(2022)10.1016/j.media.2022.102711

N/A

0DataRank · unranked

28 citations

Kevinminh Ta, Stephanie Thorn, John A. Onofrey, Inga Melvinsdottir, Supum Lee +4 more

Deep learning–based attenuation correction for whole-body PET — a multi-tracer study with 18F-FDG, 68 Ga-DOTATATE, and 18F-Fluciclovine

European Journal of Nuclear Medicine and Molecular Imaging(2022)10.1007/s00259-022-05748-2

N/A

0DataRank · unranked

25 citations

Dan Shao, Luyao Shi, Jiazhen Zhang, Enette Mae Revilla, David Ménard +6 more

Deep learning-based attenuation map generation with simultaneously reconstructed PET activity and attenuation and low-dose application

Physics in Medicine and Biology(2022)10.1088/1361-6560/acaf49

N/A

0DataRank · unranked

22 citations

Jiazhen Zhang, Takuya Toyonaga, Dan Shao, John A. Onofrey, Yihuan Lu +1 more

Adaptive data-driven motion detection and optimized correction for brain PET

NeuroImage(2022)10.1016/j.neuroimage.2022.119031

N/A

0DataRank · unranked

19 citations

Jean‐Dominique Gallezot, Mika Naganawa, Takuya Toyonaga, Kathryn Fontaine, Tim Mulnix +4 more

MR Imaging Biomarkers for the Prediction of Outcome after Radiofrequency Ablation of Hepatocellular Carcinoma: Qualitative and Quantitative Assessments of the Liver Imaging Reporting and Data System and Radiomic Features

Journal of Vascular and Interventional Radiology(2022)10.1016/j.jvir.2022.04.006

N/A

0DataRank · unranked

14 citations

Tal Zeevi, Junlin Yang, Nathan Chai, Paul DiDomenico, Yanhong Deng +15 more

Inter-Pass Motion Correction for Whole-Body Dynamic PET and Parametric Imaging

IEEE Transactions on Radiation and Plasma Medical Sciences(2022)10.1109/trpms.2022.3227576

N/A

0DataRank · unranked

11 citations

Jing Wu, Ming-Kai Chen, Qiong Liu, John A. Onofrey, Darko Pucar +6 more

An objective evaluation method for head motion estimation in PET—Motion corrected centroid-of-distribution

NeuroImage(2022)10.1016/j.neuroimage.2022.119678

N/A

0DataRank · unranked

8 citations

Enette Mae Revilla, Jiazhen Zhang, Kathryn Fontaine, Takuya Toyonaga, Jean‐Dominique Gallezot +5 more

Supervised Deep Learning for Head Motion Correction in PET

Lecture notes in computer science(2022)10.1007/978-3-031-16440-8_19

N/A

0DataRank · unranked

19 citations

Jiazhen Zhang, Enette Mae Revilla, Eléonore V. Lieffrig, Xi Fang, Yihuan Lu +2 more

Atlas-Based Semantic Segmentation of Prostate Zones

Lecture notes in computer science(2022)10.1007/978-3-031-16443-9_55

N/A

0DataRank · unranked

1 citations

Rajesh Venkataraman, Lawrence H. Staib, John A. Onofrey, Jiazhen Zhang

Predicting tumor recurrence on baseline MR imaging in patients with early-stage hepatocellular carcinoma using deep machine learning

Scientific Reports(2023)10.1038/s41598-023-34439-7

N/A

0DataRank · unranked

23 citations

Tal Zeevi, Nathan Chai, Rajiv Raju, Stefan P. Haider, Mohamed Elbanan +13 more

DuSFE: Dual-Channel Squeeze-Fusion-Excitation co-attention for cross-modality registration of cardiac SPECT and CT

Medical Image Analysis(2023)10.1016/j.media.2023.102840

N/A

0DataRank · unranked

20 citations

Bo Zhou, Huidong Xie, Xueqi Guo, Jiazhen Zhang, James S. Duncan +5 more

Patient-Specific Heart Geometry Modeling for Solid Biomechanics Using Deep Learning

IEEE Transactions on Medical Imaging(2023)10.1109/tmi.2023.3294128

N/A

0DataRank · unranked

13 citations

Minliang Liu, Theodore Kim, Liang Liang, Andrés Caballero, John A. Onofrey +7 more

Reliable Prostate Cancer Risk Mapping From MRI Using Targeted and Systematic Core Needle Biopsy Histopathology

IEEE Transactions on Biomedical Engineering(2023)10.1109/tbme.2023.3326799

N/A

0DataRank · unranked

1 citations

Michael Leapman, Preston C. Sprenkle, Rajesh Venkataraman, Lawrence H. Staib, John A. Onofrey +1 more

Fast Reconstruction for Deep Learning PET Head Motion Correction

Lecture notes in computer science(2023)10.1007/978-3-031-43999-5_67

N/A

0DataRank · unranked

6 citations

Jiazhen Zhang, Eléonore V. Lieffrig, Zhuotong Cai, Fuyao Chen, Chenyu You +4 more

Multi-Task Deep Learning and Uncertainty Estimation for Pet Head Motion Correction

PubMed(2023)10.1109/isbi53787.2023.10230791

N/A

0DataRank · unranked

3 citations

Tianyi Zeng, Jiazhen Zhang, Kathryn Fontaine, Xi Fang, Enette Mae Revilla +3 more

Aging-Dependent Loss of Connectivity in Alzheimer’s Model Mice with Rescue by mGluR5 Modulator

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.15.571715

N/A

0DataRank · unranked

2 citations

Xilin Shen, Gabriel Desrosiers-Grégoire, David O’Connor, Bandhan Mukherjee, Ashley Owens +7 more

Cross-Attention for Improved Motion Correction in Brain PET

Lecture notes in computer science(2023)10.1007/978-3-031-44858-4_4

N/A

0DataRank · unranked

1 citations

Tianyi Zeng, Eléonore V. Lieffrig, Jiazhen Zhang, Fuyao Chen, Takuya Toyonaga +7 more

Integrating Prostate Specific Antigen Density Biomarker Into Deep Learning Prostate MRI Lesion Segmentation Models

PubMed(2023)10.1109/isbi53787.2023.10230418

N/A

0DataRank · unranked

0 citations

Lawrence H. Staib, Rajesh Venkataraman, John A. Onofrey, Jiayang Zhong

Image Intensity Normalization Benefits Deep Learning Brain PET Motion Correction

(2023)10.1109/nssmicrtsd49126.2023.10338194

N/A

0DataRank · unranked

0 citations

Jing Zhang, Tieyong Zeng, Z. Cai, C. You, Yihuan Lu +2 more

Aging-dependent loss of functional connectivity in a mouse model of Alzheimer’s disease and reversal by mGluR5 modulator

Molecular Psychiatry(2024)10.1038/s41380-024-02779-z

N/A

0DataRank · unranked

15 citations

Xilin Shen, Gabriel Desrosiers-Grégoire, David O’Connor, Bandhan Mukherjee, Ashley Owens +7 more

A Flow-based Truncated Denoising Diffusion Model for super-resolution Magnetic Resonance Spectroscopic Imaging

Medical Image Analysis(2024)10.1016/j.media.2024.103358

N/A

0DataRank · unranked

8 citations

Zhuotong Cai, Gilbert Hangel, Wolfgang Bogner, Georg Widhalm, Yaqing Huang +10 more

Comparative Performance of Machine Learning Models in Reducing Unnecessary Targeted Prostate Biopsies

European Urology Oncology(2025)10.1016/j.euo.2025.01.005

N/A

0DataRank · unranked

4 citations

Roxana Esmaili, Ghazal Khajir, Tal Zeevi, Moritz Gross, Michael Leapman +13 more

Conditional Convolution of Clinical Data Embeddings for Multimodal Prostate Cancer Classification

(2025)10.1109/isbi60581.2025.10981307

N/A

0DataRank · unranked

1 citations

Fuyao Chen, Lihui Chen, Dennis Shung, John A. Onofrey, Jiayang Zhong

Deep learning-based attenuation map generation for myocardial perfusion SPECT

European Journal of Nuclear Medicine and Molecular Imaging(2020)10.1007/s00259-020-04746-6

N/A

0DataRank · unranked

128 citations

John A. Onofrey, Hui Liu, Yi-Hwa Liu, Chi Liu, Luyao Shi

PET Head Motion Estimation Using Supervised Deep Learning With Attention

IEEE Transactions on Medical Imaging(2025)10.1109/tmi.2025.3620714

N/A

0DataRank · unranked

0 citations

Tianyi Zeng, Jiazhen Zhang, Eléonore V. Lieffrig, Kathryn Fontaine, Chenyu You +6 more

John A. Onofrey

Indexed papers

Top data-sharing exemplar

Papers