Peter L. Ralph

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 34 papers. Top paper: “A community-maintained standard library of population genetic models”.

A community-maintained standard library of population genetic models

eLife(2020)10.7554/elife.54967

N/A

0DataRank · unranked

260 citations

C. B. Cole, Noah Dukler, Jared Galloway, Ariella Gladstein, Graham Gower +24 more

Predicting geographic location from genetic variation with deep neural networks

eLife(2020)10.7554/elife.54507

N/A

0DataRank · unranked

135 citations

Peter L. Ralph, Andrew D. Kern, C.J. Battey

Evaluating human autosomal loci for sexually antagonistic viability selection in two large biobanks

Genetics(2020)10.1093/genetics/iyaa015

N/A

0DataRank · unranked

38 citations

Abin Abraham, Peter L. Ralph, Andrew D. Kern, John A. Capra, Patrick C. Phillips +1 more

Evaluating Human Autosomal Loci for Sexually Antagonistic Viability Selection in Two Large Biobanks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.26.009670

N/A

0DataRank · unranked

4 citations

Abin Abraham, Peter L. Ralph, Andrew D. Kern, John A. Capra, Patrick C. Phillips +1 more

Efficient ancestry and mutation simulation with msprime 1.0

Genetics(2021)10.1093/genetics/iyab229

N/A

0DataRank · unranked

517 citations

Gertjan Bisschop, Daniel Goldstein, Graham Gower, Aaron P. Ragsdale, Georgia Tsambos +27 more

Efficient ancestry and mutation simulation with msprime 1.0

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.31.457499

N/A

0DataRank · unranked

31 citations

Gertjan Bisschop, Daniel Goldstein, Graham Gower, Aaron P. Ragsdale, Georgia Tsambos +27 more

Enabling inference for context-dependent models of mutation by bounding the propagation of dependency

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.15.472813

N/A

0DataRank · unranked

0 citations

Peter L. Ralph, Frederick A. Matsen

Dispersal inference from population genetic variation using a convolutional neural network

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.25.505329

N/A

0DataRank · unranked

10 citations

Silas Tittes, Peter L. Ralph, Andrew D. Kern, Chris C. R. Smith

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.29.514266

N/A

0DataRank · unranked

10 citations

Maria Izabel A. Cavassim, Ariella Gladstein, Graham Gower, Nathaniel S. Pope, Georgia Tsambos +37 more

slendr : a framework for spatio-temporal population genomic simulations on geographic landscapes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.20.485041

N/A

0DataRank · unranked

9 citations

Benjamin C. Haller, Peter L. Ralph, Fernando Racimo, Martin Petr

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

eLife(2023)10.7554/elife.84874

N/A

0DataRank · unranked

55 citations

Maria Izabel A. Cavassim, Ariella Gladstein, Graham Gower, Nathaniel S. Pope, Georgia Tsambos +37 more

Dispersal inference from population genetic variation using a convolutional neural network

Genetics(2023)10.1093/genetics/iyad068

N/A

0DataRank · unranked

53 citations

Silas Tittes, Peter L. Ralph, Andrew D. Kern, Chris C. R. Smith

link-ancestors: fast simulation of local ancestry with tree sequence software

Bioinformatics Advances(2023)10.1093/bioadv/vbad163

N/A

0DataRank · unranked

15 citations

Jerome Kelleher, Peter L. Ralph, Stephen Leslie, Damjan Vukcevic, Georgia Tsambos

Shared evolutionary processes shape landscapes of genomic variation in the great apes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.07.527547

N/A

0DataRank · unranked

6 citations

Andrew D. Kern, Peter L. Ralph, Murillo F. Rodrigues

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

(2023)10.7554/elife.84874.1

N/A

0DataRank · unranked

2 citations

Maria Izabel A. Cavassim, Ariella Gladstein, Graham Gower, Nathaniel S. Pope, Georgia Tsambos +37 more

Author Response: Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

(2023)10.7554/elife.84874.1.sa0

N/A

0DataRank · unranked

0 citations

Maria Izabel A. Cavassim, Ariella Gladstein, Graham Gower, Nathaniel S. Pope, Georgia Tsambos +37 more

Looking forwards and backwards: dynamics and genealogies of locally regulated populations

arXiv (Cornell University)(2023)10.48550/arxiv.2305.14488

N/A

0DataRank · unranked

0 citations

Thomas G. Kurtz, Ian Letter, Peter L. Ralph, Terence Tsui Ho Lung, Alison Etheridge

Evaluating evidence for co-geography in the Anopheles-Plasmodium host-parasite system

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.17.549405

N/A

0DataRank · unranked

0 citations

Peter L. Ralph, Andrew D. Kern, Clara T. Rehmann

Genetic architecture, spatial heterogeneity, and the coevolutionary arms race between newts and snakes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.07.570693

N/A

0DataRank · unranked

0 citations

Peter L. Ralph, Victoria Caudill

Looking forwards and backwards: Dynamics and genealogies of locally regulated populations

Electronic Journal of Probability(2024)10.1214/24-ejp1075

N/A

0DataRank · unranked

14 citations

Thomas G. Kurtz, Ian Letter, Peter L. Ralph, Terence Tsui Ho Lung, Alison Etheridge

Shared evolutionary processes shape landscapes of genomic variation in the great apes

Genetics(2024)10.1093/genetics/iyae006

N/A

0DataRank · unranked

14 citations

Andrew D. Kern, Peter L. Ralph, Murillo F. Rodrigues

Estimation of spatial demographic maps from polymorphism data using a neural network

Molecular Ecology Resources(2024)10.1111/1755-0998.14005

N/A

0DataRank · unranked

5 citations

Gilia Patterson, Peter L. Ralph, Andrew D. Kern, Chris C. R. Smith

Evaluating evidence for co-geography in the Anopheles–Plasmodium host–parasite system

G3 Genes Genomes Genetics(2024)10.1093/g3journal/jkae008

N/A

0DataRank · unranked

3 citations

Peter L. Ralph, Andrew D. Kern, Clara T. Rehmann

Estimation of spatial demographic maps from polymorphism data using a neural network

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585300

N/A

0DataRank · unranked

3 citations

Gilia Patterson, Peter L. Ralph, Andrew D. Kern, Chris C. R. Smith

Quantitative Genetics of Microbiome Mediated Traits

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.16.628599

N/A

0DataRank · unranked

2 citations

Peter L. Ralph, Hannah F. Tavalire, William A. Cresko, Brendan J. M. Bohannan, Bob Week

SLiM 5: Eco-evolutionary Simulations Across Multiple Chromosomes and Full Genomes

Molecular Biology and Evolution(2025)10.1093/molbev/msaf313

N/A

0DataRank · unranked

9 citations

Peter L. Ralph, Philipp W. Messer, Benjamin C. Haller

Population Genetics Meets Ecology: A Guide to Individual‐Based Simulations in Continuous Landscapes

Ecology and Evolution(2025)10.1002/ece3.71098

N/A

0DataRank · unranked

8 citations

Jiseon Min, Victoria Caudill, Samuel E. Champer, Benjamin C. Haller, Clara T. Rehmann +7 more

Accessible, Realistic Genome Simulation with Selection Using stdpopsim

Molecular Biology and Evolution(2025)10.1093/molbev/msaf236

N/A

0DataRank · unranked

7 citations

Nathaniel S. Pope, Murillo F. Rodrigues, Silas Tittes, Linh N. Tran, Ornob Alam +26 more

Sweeps in Space: Leveraging Geographic Data to Identify Beneficial Alleles in Anopheles gambiae

Molecular Biology and Evolution(2025)10.1093/molbev/msaf141

N/A

0DataRank · unranked

3 citations

Scott T. Small, Peter L. Ralph, Andrew D. Kern, Clara T. Rehmann

Likelihoods for a general class of ARGs under the SMC

Genetics(2025)10.1093/genetics/iyaf103

N/A

0DataRank · unranked

2 citations

Jerome Kelleher, Peter L. Ralph, Gertjan Bisschop

Quantitative genetics of microbiome-mediated traits

Evolution(2025)10.1093/evolut/qpaf171

N/A

0DataRank · unranked

3 citations

Peter L. Ralph, Hannah F. Tavalire, William A. Cresko, Brendan J. M. Bohannan, Bob Week

SLiM 5: Eco-evolutionary simulations across multiple chromosomes and full genomes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.07.669155

N/A

0DataRank · unranked

9 citations

Peter L. Ralph, Philipp W. Messer, Benjamin C. Haller

Simulation-based spatially explicit close-kin mark-recapture

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.31.656892

N/A

0DataRank · unranked

1 citations

Claire K. Goodfellow, Nelson Ting, Andrew D. Kern, Peter L. Ralph, Gilia Patterson

Simulation‐Based Spatially Explicit Close‐Kin Mark–Recapture

Molecular Ecology Resources(2025)10.1111/1755-0998.70074

N/A

0DataRank · unranked

0 citations

Claire K. Goodfellow, Nelson Ting, Andrew D. Kern, Peter L. Ralph, Gilia Patterson