Shabaana A. Khader

Also affiliated with University of Illinois Chicago, University of Chicago

MedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 54 papers. Top paper: “The immunoregulatory landscape of human tuberculosis granulomas”.

The immunoregulatory landscape of human tuberculosis granulomas

Nature Immunology(2022)10.1038/s41590-021-01121-x

N/A

5.4DataRank · unranked

313 citations

Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan B. Fitzpatrick +23 more

Immunometabolism during Mycobacterium tuberculosis Infection

Trends in Microbiology(2020)10.1016/j.tim.2020.04.010

N/A

0.731DataRank · unranked

130 citations

Shabaana A. Khader, Nicole C. Howard

Myeloid cell interferon responses correlate with clearance of SARS-CoV-2

Nature Communications(2022)10.1038/s41467-022-28315-7

N/A

0.612DataRank · unranked

58 citations

Ekaterina Aladyeva, Shibali Das, Bindu Singh, Ekaterina Esaulova, Amanda Swain +9 more

Poly(ADP-ribose) polymerase 9 mediates early protection against Mycobacterium tuberculosis infection by regulating type I IFN production

Journal of Clinical Investigation(2023)10.1172/jci158630

N/A

0.457DataRank · unranked

20 citations

Mushtaq Ahmed, Bruce A. Rosa, Mark Boothby, Sung Hoon Cho, Javier Rangel‐Moreno +9 more

Lung type 3 innate lymphoid cells respond early following Mycobacterium tuberculosis infection

mBio(2024)10.1128/mbio.03299-23

N/A

0.419DataRank · unranked

12 citations

Kuldeep S Chauhan, Mushtaq Ahmed, Sadia Akter, Lan Lu, Marco Colonna +2 more

Advancing Lung Immunology Research: An Official American Thoracic Society Workshop Report

American Journal of Respiratory Cell and Molecular Biology(2022)10.1165/rcmb.2022-0167st

N/A

0.345DataRank · unranked

9 citations

Christina Schofield, Claudia Jakubzick, Shabaana A. Khader, Bart N. Lambrecht, Clare M. Lloyd +7 more

Mycobacterium tuberculosis carrying the rifampicin drug-resistance-conferring rpoB mutation H445Y is associated with suppressed immunity through type I interferons

mBio(2023)10.1128/mbio.00946-23

N/A

0.292DataRank · unranked

6 citations

Nicole C. Howard, Shibali Das, Mushtaq Ahmed, Linrui Tang, Shyamala Thirunavukkarasu +5 more

Author Correction: Responses to acute infection with SARS-CoV-2 in the lungs of rhesus macaques, baboons and marmosets

Nature Microbiology(2021)10.1038/s41564-021-00867-2

N/A

0.269DataRank · unranked

5 citations

Bindu Singh, Shashank Ganatra, Michal Gaži, Journey Cole, Rajesh Thippeshappa +57 more

Mycobacterium tuberculosis infection drives differential responses in the bone marrow hematopoietic stem and progenitor cells

Infection and Immunity(2023)10.1128/iai.00201-23

N/A

0.241DataRank · unranked

4 citations

Nicole C. Howard, Shibali Das, Mushtaq Ahmed, Nargis Khan, I Sanabria Marchante +5 more

Elevated Level of Circulating but Not Urine S100A8/A9 Identifies Poor COVID-19 Outcomes

ACS Infectious Diseases(2023)10.1021/acsinfecdis.3c00249

N/A

0.208DataRank · unranked

3 citations

Gaya K. Amarasinghe, Christopher W Farnsworth, Shabaana A. Khader, Leah Mellett

Development and preclinical evaluation of next-generation ΔsigH-based live candidate vaccines

JCI Insight(2025)10.1172/jci.insight.195947

N/A

0.104DataRank · unranked

1 citations

Caden W. Munson, Mushtaq Ahmed, Vinay Shivanna, Annu Devi, Venkata Siva Reddy Devireddy +11 more

Mast cells promote pathology and susceptibility in tuberculosis

eLife(2024)10.7554/elife.102634

N/A

0.104DataRank · unranked

1 citations

Vibha Taneja, Javier Rangel‐Moreno, Nilofer Naqvi, Abhimanyu Abhimanyu, Tao Yun +10 more

IFN signaling and neutrophil degranulation transcriptional signatures are induced during SARS-CoV-2 infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.06.239798

N/A

0DataRank · unranked

25 citations

Mushtaq Ahmed, Dhiraj Kumar Singh, José Alberto Choreño-Parra, Journey Cole, Luis Jiménez-Álvarez +11 more

Unexpected Role for IL-17 in Protective Immunity against Hypervirulent Mycobacterium tuberculosis HN878 Infection

UNC Libraries(2020)10.17615/1xte-8666

N/A

0DataRank · unranked

0 citations

Beth A. Fallert Junecko, Todd A. Reinhart, Leticia Monin, Jay K. Kolls, Rosalío Ramos‐Payán +9 more

S100A8/A9 in COVID-19 pathogenesis: Impact on clinical outcomes

Cytokine & Growth Factor Reviews(2021)10.1016/j.cytogfr.2021.10.004

N/A

0DataRank · unranked

111 citations

Shabaana A. Khader, Leah Mellett

IFN signaling and neutrophil degranulation transcriptional signatures are induced during SARS-CoV-2 infection

Communications Biology(2021)10.1038/s42003-021-01829-4

N/A

0DataRank · unranked

109 citations

Mushtaq Ahmed, Dhiraj Kumar Singh, José Alberto Choreño-Parra, Journey Cole, Luis Jiménez-Álvarez +11 more

Longitudinal Dynamics of a Blood Transcriptomic Signature of Tuberculosis

American Journal of Respiratory and Critical Care Medicine(2021)10.1164/rccm.202103-0548oc

N/A

0DataRank · unranked

35 citations

Munyaradzi Musvosvi, Simon C. Mendelsohn, Adam Penn-Nicholson, Stanley Kimbung Mbandi, Andrew Fioré-Gartland +28 more

Myeloid-Derived Suppressor Cells Mediate T Cell Dysfunction in Nonhuman Primate TB Granulomas

mBio(2021)10.1128/mbio.03189-21

N/A

0DataRank · unranked

27 citations

Dhiraj Kumar Singh, Shashank Ganatra, Ruby A. Escobedo, Shabaana A. Khader, Larry S. Schlesinger +3 more

Antiretroviral therapy timing impacts latent tuberculosis infection reactivation in a Mycobacterium tuberculosis/SIV coinfection model

Journal of Clinical Investigation(2021)10.1172/jci153090

N/A

0DataRank · unranked

24 citations

Shashank Ganatra, Allison N. Bucşan, Journey Cole, Dhiraj Kumar Singh, Xavier Álvarez +15 more

Expression of Surfactant Protein D Distinguishes Severe Pandemic Influenza A(H1N1) from Coronavirus Disease 2019

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab113

N/A

0DataRank · unranked

20 citations

Luis Jiménez-Álvarez, Gustavo Ramírez-Martínez, Alfredo Cruz‐Lagunas, Mahima Thapa, Luis Alejandro Fernández-López +26 more

Lung Epithelial Signaling Mediates Early Vaccine-Induced CD4 + T Cell Activation and Mycobacterium tuberculosis Control

mBio(2021)10.1128/mbio.01468-21

N/A

0DataRank · unranked

19 citations

Nancy D. Marín, Ekaterina Esaulova, Mushtaq Ahmed, Amanda Swain, Bruce A. Rosa +9 more

CXCL17 Is Dispensable during Hypervirulent Mycobacterium tuberculosis HN878 Infection in Mice

ImmunoHorizons(2021)10.4049/immunohorizons.2100048

N/A

0DataRank · unranked

6 citations

Micah Dunlap, Rosemary V. Swanson, Luis Jiménez-Álvarez, Marcela Muñóz-Torrico, Silvia Guzmán‐Beltrán +3 more

Myeloid cell interferon responses correlate with clearance of SARS-CoV-2

Research Square(2021)10.21203/rs.3.rs-664507/v1

N/A

0DataRank · unranked

2 citations

Ekaterina Aladyeva, Shibali Das, Bindu Singh, Ekaterina Esaulova, Amanda Swain +9 more

Lung epithelial signaling mediates early vaccine-induced CD4 + T cell activation and Mtb control

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.03.446981

N/A

0DataRank · unranked

1 citations

Nancy D. Marín, Ekaterina Esaulova, Mushtaq Ahmed, Amanda Swain, Bruce A. Rosa +9 more

Myeloid cell interferon responses correlate with clearance of SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.28.450153

N/A

0DataRank · unranked

0 citations

Ekaterina Aladyeva, Shibali Das, Bindu Singh, Ekaterina Esaulova, Amanda Swain +9 more

Mycobacterium tuberculosis infection drives a type I IFN signature in lung lymphocytes

Cell Reports(2022)10.1016/j.celrep.2022.110983

N/A

0DataRank · unranked

66 citations

Kuldeep S Chauhan, Micah Dunlap, José Alberto Choreño-Parra, Lan Lu, Ekaterina Esaulova +5 more

Response to Hypoxia and the Ensuing Dysregulation of Inflammation Impacts Mycobacterium tuberculosis Pathogenicity

American Journal of Respiratory and Critical Care Medicine(2022)10.1164/rccm.202112-2747oc

N/A

0DataRank · unranked

21 citations

Ashley V. Veatch, Dhiraj Kumar Singh, Sadia Akter, Nadia Golden, Melanie G. Kirkpatrick +13 more

Development and Testing of a Spray-Dried Tuberculosis Vaccine Candidate in a Mouse Model

Frontiers in Pharmacology(2022)10.3389/fphar.2021.799034

N/A

0DataRank · unranked

18 citations

Mushtaq Ahmed, Shibali Das, Joseph McCollum, Leah Mellett, Rosemary V. Swanson +16 more

Responses to acute infection with SARS-CoV-2 in the lungs of rhesus macaques, baboons and marmosets

Nature Microbiology(2020)10.1038/s41564-020-00841-4

N/A

0DataRank · unranked

210 citations

Bindu Singh, Shashank Ganatra, Michal Gaži, Journey Cole, Rajesh Thippeshappa +57 more

Author Correction: The immunoregulatory landscape of human tuberculosis granulomas

Nature Immunology(2022)10.1038/s41590-022-01178-2

N/A

0DataRank · unranked

6 citations

Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan B. Fitzpatrick +23 more

Antigen-specific B cells direct T follicular-like helper cells into lymphoid follicles to mediate Mycobacterium tuberculosis control

Nature Immunology(2023)10.1038/s41590-023-01476-3

N/A

0DataRank · unranked

95 citations

Ananya Gupta, Taylor W. Foreman, Lan Lu, José Alberto Choreño-Parra, Stanley Kimbung Mbandi +17 more

A protocol to analyze single-cell RNA-seq data from Mycobacterium tuberculosis-infected mice lung

STAR Protocols(2023)10.1016/j.xpro.2023.102544

N/A

0DataRank · unranked

4 citations

Shabaana A. Khader, Sadia Akter

Development of Luminescent Biosensors for Calprotectin

ACS Chemical Biology(2024)10.1021/acschembio.4c00265

N/A

0DataRank · unranked

7 citations

Tomasz Ślężak, Jinyue Pu, Julia Zinkus-Boltz, Sarbani Adhikari, Joel Pekow +10 more

Nuclear Factor κB Signaling Deficiency in CD11c-Expressing Phagocytes Mediates Early Inflammatory Responses and Enhances Mycobacterium tuberculosis Control

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae060

N/A

0DataRank · unranked

5 citations

Micah Dunlap, Sadia Akter, Ananya Gupta, Mushtaq Ahmed, Bruce A. Rosa +4 more

Phospholipase C epsilon-1 (PLCƐ1) mediates macrophage activation and protection against tuberculosis

Infection and Immunity(2024)10.1128/iai.00495-23

N/A

0DataRank · unranked

5 citations

Shyamala Thirunavukkarasu, Javier Rangel‐Moreno, Mushtaq Ahmed, Rosemary V. Swanson, Stanley Kimbung Mbandi +5 more

A protective role for type I interferon signaling following infection with Mycobacterium tuberculosis carrying the rifampicin drug resistance-conferring RpoB mutation H445Y

PLoS Pathogens(2024)10.1371/journal.ppat.1012137

N/A

0DataRank · unranked

5 citations

Kuldeep S Chauhan, Sadia Akter, Shibali Das, Ekansh Mittal, Barun Mathema +3 more

Concurrent TB and HIV therapies effectively control clinical reactivation of TB during co-infection but fail to eliminate chronic immune activation

Research Square(2024)10.21203/rs.3.rs-4908400/v1

N/A

0DataRank · unranked

2 citations

Yi Zou, Zhao Lai, Bindu Singh, Vinay Shivanna, Edward J. Dick +7 more

β-Glucan reprograms neutrophils to promote disease tolerance against influenza A virus

Nature Immunology(2025)10.1038/s41590-024-02041-2

N/A

0DataRank · unranked

50 citations

Kim A. Tran, Raphael Chevre, Veronica Locher, Mathis Richter, Sarah Sun +14 more

Prevention of tuberculosis in cynomolgus macaques by an attenuated Mycobacterium tuberculosis vaccine candidate

Nature Communications(2025)10.1038/s41467-025-57090-4

N/A

0DataRank · unranked

16 citations

Mushtaq Ahmed, Sadia Akter, Vinay Shivanna, Allison N. Bucşan, Abhishek Mishra +12 more

Concurrent TB and HIV therapies control TB reactivation during co-infection but not chronic immune activation

Nature Communications(2025)10.1038/s41467-025-67188-4

N/A

0DataRank · unranked

2 citations

Yi Zou, Bindu Singh, Vinay Shivanna, Edward J. Dick, Shannan Hall-Ursone +10 more

Single-cell transcriptome analysis of bronchoalveolar lavage during early SARS-CoV-2 infection

Microbiology Spectrum(2025)10.1128/spectrum.02715-24

N/A

0DataRank · unranked

0 citations

Mushtaq Ahmed, Dhiraj Kumar Singh, Kuldeep S Chauhan, Deepak Kaushal, Shabaana A. Khader +1 more

Mincle receptor agonist UM-1098 and TLR4 agonist INI-2002 combination adjuvant enhances Th1 responses and provides protection against Mycobacterium tuberculosis challenge in mice

Vaccine X(2025)10.1016/j.jvacx.2025.100699

N/A

0DataRank · unranked

0 citations

Grace C. Jones, Mushtaq Ahmed, Vibha Taneja, Alexander Riffey, Walid Abdelwahab +4 more

CWHM-12, an Antagonist of Integrin-Mediated Transforming Growth Factor-Beta Activation Confers Protection During Early Mycobacterium tuberculosis Infection in Mice

Journal of Interferon & Cytokine Research(2022)10.1089/jir.2022.0027

N/A

0DataRank · unranked

2 citations

Shyamala Thirunavukkarasu, Javier Rangel‐Moreno, David W. Griggs, Shabaana A. Khader, Ninecia R. Scott

The immune landscape in tuberculosis reveals populations linked to disease and latency

Cell Host & Microbe(2020)10.1016/j.chom.2020.11.013

N/A

0DataRank · unranked

201 citations

Shibali Das, Dhiraj Kumar Singh, José Alberto Choreño-Parra, Amanda Swain, Laura Arthur +16 more

S100A8/A9 regulates CD11b expression and neutrophil recruitment during chronic tuberculosis

Journal of Clinical Investigation(2020)10.1172/jci130546

N/A

0DataRank · unranked

149 citations

Rosemary V. Swanson, Noor Al‐Hammadi, Racquel Domingo-Gonzalez, Javier Rangel‐Moreno, Belinda Kriel +17 more

Trained immunity, tolerance, priming and differentiation: distinct immunological processes

Nature Immunology(2020)10.1038/s41590-020-00845-6

N/A

0DataRank · unranked

603 citations

Peter Aaby, Shabaana A. Khader, Luis B. Barreiro, Siroon Bekkering, Triantafyllos Chavakis +39 more

Immune correlates of tuberculosis disease and risk translate across species

Science Translational Medicine(2020)10.1126/scitranslmed.aay0233

N/A

0DataRank · unranked

99 citations

Shyamala Thirunavukkarasu, Bruce A. Rosa, Kimberly A. Thomas, Shibali Das, Javier Rangel‐Moreno +13 more

The protective and pathogenic roles of CXCL17 in human health and disease: Potential in respiratory medicine

Cytokine & Growth Factor Reviews(2020)10.1016/j.cytogfr.2020.04.004

N/A

0DataRank · unranked

86 citations

Shyamala Thirunavukkarasu, Joaquı́n Zúñiga, Shabaana A. Khader, José Alberto Choreño-Parra

Chronic Immune Activation in TB/HIV Co-infection

Trends in Microbiology(2020)10.1016/j.tim.2020.03.015

N/A

0DataRank · unranked

70 citations

Allison N. Bucşan, Shashank Ganatra, Mirko Paiardini, Mahesh Mohan, Smriti Mehra +3 more

Antiretroviral therapy does not reduce tuberculosis reactivation in a tuberculosis-HIV coinfection model

Journal of Clinical Investigation(2020)10.1172/jci136502

N/A

0DataRank · unranked

51 citations

Allison N. Bucşan, Xavier Álvarez, Shyamesh Kumar, Ayan Chatterjee, Melanie Quezada +12 more

Formation of Lung Inducible Bronchus Associated Lymphoid Tissue Is Regulated by Mycobacterium tuberculosis Expressed Determinants

Frontiers in Immunology(2020)10.3389/fimmu.2020.01325

N/A

0DataRank · unranked

21 citations

Oliver Prince, Javier Rangel‐Moreno, Kimberly A. Thomas, Julia M. Scordo, Jordi B. Torrelles +6 more

Targeting Unconventional Host Components for Vaccination-Induced Protection Against TB

Frontiers in Immunology(2020)10.3389/fimmu.2020.01452

N/A

0DataRank · unranked

13 citations

Shabaana A. Khader, Rosemary V. Swanson, Willem A. Hanekom, Elisa Nemes

Cryptococcus neoformans Evades Pulmonary Immunity by Modulating Xylose Precursor Transport

Infection and Immunity(2020)10.1128/iai.00288-20

N/A

0DataRank · unranked

12 citations

Camaron R. Hole, Javier Rangel‐Moreno, Shabaana A. Khader, Tamara L. Doering, Lucy X. Li

Therapies for tuberculosis and AIDS: myeloid-derived suppressor cells in focus

Journal of Clinical Investigation(2020)10.1172/jci136288

N/A

0DataRank · unranked

46 citations

Leigh A. Kotzé, Jay A. Berzofsky, Yongjun Sui, Dmitry I. Gabrilovich, Ankita Garg +11 more