🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Ivan N. Zheludev

Stanford Medicine

ORCID: 0000-0002-9572-0574

Also affiliated with Stanford University

Biochemistry, Genetics and Molecular BiologyEnvironmental ScienceMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
3.9Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

De novo3D models of SARS-CoV-2 RNA elements from consensus experimental secondary structures

Nucleic Acids Research(2021)10.1093/nar/gkab119
Top 8%
2.8DataRank
Top 8%85 citations

Andrew M. Watkins, Jose Chacon, Rachael C. Kretsch, Wipapat Kladwang, Ivan N. Zheludev +5 more

Papers

Driven by 14 papers — median percentile 87. Top paper: “De novo3D models of SARS-CoV-2 RNA elements from consensus experimental secondary structures”.

De novo3D models of SARS-CoV-2 RNA elements from consensus experimental secondary structures

Nucleic Acids Research(2021)10.1093/nar/gkab119
Top 8%
2.8DataRank
Top 8%85 citations

Andrew M. Watkins, Jose Chacon, Rachael C. Kretsch, Wipapat Kladwang, Ivan N. Zheludev +5 more

De novo 3D models of SARS-CoV-2 RNA elements and small-molecule-binding RNAs to aid drug discovery

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.14.041962
Top 19%
1.1DataRank
Top 19%21 citations

Andrew M. Watkins, Jose Chacon, Wipapat Kladwang, Ivan N. Zheludev, Jill Townley +4 more

RNA target highlights in CASP15: Evaluation of predicted models by structure providers

(2023)10.22541/au.168487314.47726735/v1
N/A
0.165DataRank · unranked
2 citations

Ebbe Sloth Andersen, Janusz M. Bujnicki, Wah Chiu, Rhiju Das, Bingnan Luo +11 more

Tertiary folds of the SL5 RNA from the 5′ proximal region of SARS-CoV-2 and related coronaviruses

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.22.567964
N/A
0.165DataRank · unranked
2 citations

Lily Xu, Ivan N. Zheludev, Xueting Zhou, Rui Huang, Nye G +5 more

Restriction Endonuclease-Based Modification-Dependent Enrichment (REMoDE) of DNA for Metagenomic Sequencing

Applied and Environmental Microbiology(2022)10.1128/aem.01670-22
N/A
0DataRank · unranked
6 citations

Joshua L. Cherry, Susan R. Leonard, Ivan N. Zheludev, David J. Lipman, Andrew Fire +1 more

Restriction Endonuclease-based Modification-Dependent Enrichment (REMoDE) of DNA for Metagenomic Sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.30.510419
N/A
0DataRank · unranked
1 citations

Joshua L. Cherry, Susan R. Leonard, Ivan N. Zheludev, David J. Lipman, Andrew Fire +1 more

Cryo-EM and antisense targeting of the 28-kDa frameshift stimulation element from the SARS-CoV-2 RNA genome

UNC Libraries(2022)10.17615/q6mz-jr12
N/A
0DataRank · unranked
0 citations

Ivan N. Zheludev, Grigore Pintilie, Timothy P. Sheahan, Raphael Haslecker, Ralph S. Baric +14 more

RNA target highlights in CASP15: Evaluation of predicted models by structure providers

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26550
N/A
0DataRank · unranked
53 citations

Ebbe Sloth Andersen, Janusz M. Bujnicki, Wah Chiu, Rhiju Das, Bingnan Luo +11 more

Viroid-like colonists of human microbiomes

Cell(2024)10.1016/j.cell.2024.09.033
N/A
0DataRank · unranked
47 citations

R. C. Edgar, María José López-Galiano, Marcos de la Peña, Artem Babaian, Ami S. Bhatt +2 more

Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures

Nature Methods(2020)10.1038/s41592-020-0878-9
N/A
0DataRank · unranked
191 citations

Kaiming Zhang, Zhaoming Su, Andrew M. Watkins, Wipapat Kladwang, Shanshan Li +8 more

Viroid-like colonists of human microbiomes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.20.576352
N/A
0DataRank · unranked
25 citations

R. C. Edgar, María José López-Galiano, Marcos de la Peña, Artem Babaian, Ami S. Bhatt +2 more

RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses: a first look

RNA(2020)10.1261/rna.076141.120
N/A
0DataRank · unranked
293 citations

Ivan N. Zheludev, Rachel J. Hagey, Edward A. Pham, Hannah K. Wayment-Steele, Jeffrey S. Glenn +2 more

Exploring the evolutionary history of kinetic stability in the alpha-lytic protease family

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.30.274340
N/A
0DataRank · unranked
0 citations

Shion A. Lim, Zachary R. Sailer, Ivan N. Zheludev, Christine L. Gee, Brian A. Kelch +3 more

Cryo-EM and antisense targeting of the 28-kDa frameshift stimulation element from the SARS-CoV-2 RNA genome

Nature Structural & Molecular Biology(2021)10.1038/s41594-021-00653-y
N/A
0DataRank · unranked
172 citations

Ivan N. Zheludev, Rachel J. Hagey, Raphael Haslecker, Yixuan J. Hou, Rachael C. Kretsch +14 more