Shaoheng Liang

The University of Texas MD Anderson Cancer Center

Also affiliated with Carnegie Mellon University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 26 papers. Top paper: “Unbiased integration of single cell multi-omics data”.

Unbiased integration of single cell multi-omics data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.11.422014

N/A

0DataRank · unranked

25 citations

Shaoheng Liang, Vakul Mohanty, Xuesen Cheng, Sangbae Kim, Jongsu Choi +5 more

Unbiased integration of single cell multi-omics data

Research Square(2020)10.21203/rs.3.rs-126986/v1

N/A

0DataRank · unranked

6 citations

Shaoheng Liang, Vakul Mohanty, Xuesen Cheng, Sangbae Kim, Jongsu Choi +5 more

Single-cell copy number lineage tracing enabling gene discovery

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.12.038281

N/A

0DataRank · unranked

1 citations

Qihan Wang, Vakul Mohanty, Shaoheng Liang, Jinzhuang Dou, Jincheng Han +6 more

Batch-Corrected Distance Mitigates Temporal and Spatial Variability for Clustering and Visualization of Single-Cell Gene Expression Data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.08.332080

N/A

0DataRank · unranked

1 citations

Jinzhuang Dou, Ramiz Iqbal, Ken Chen, Shaoheng Liang

MEDALT: single-cell copy number lineage tracing enabling gene discovery

Genome biology(2021)10.1186/s13059-021-02291-5

N/A

0DataRank · unranked

45 citations

Qihan Wang, Vakul Mohanty, Shaoheng Liang, Jinzhuang Dou, Jincheng Han +6 more

Extended live-cell barcoding approach for multiplexed mass cytometry

Scientific Reports(2021)10.1038/s41598-021-91816-w

N/A

0DataRank · unranked

23 citations

Li Li, Shaoheng Liang, Duncan H. Mak, Angelique Lin, Junxiang Fang +4 more

Decoupling Lineage-Associated Genes in Acute Myeloid Leukemia Reveals Inflammatory and Metabolic Signatures Associated With Outcomes

Frontiers in Oncology(2021)10.3389/fonc.2021.705627

N/A

0DataRank · unranked

12 citations

Vakul Mohanty, Ruiping Wang, Yuefan Huang, Shaoheng Liang, Feng Wang +13 more

Stratified Test Accurately Identifies Differentially Expressed Genes Under Batch Effects in Single-Cell Data

IEEE/ACM Transactions on Computational Biology and Bioinformatics(2021)10.1109/tcbb.2021.3094650

N/A

0DataRank · unranked

5 citations

Qingnan Liang, Rui Chen, Ken Chen, Shaoheng Liang

Stratified Test Accurately Identifies Differentially Expressed Genes Under Batch Effects in Single-Cell Data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.08.447617

N/A

0DataRank · unranked

2 citations

Qingnan Liang, Rui Chen, Ken Chen, Shaoheng Liang

Sensei: How Many Samples to Tell Evolution in Single-Cell Studies?

Research Square(2021)10.21203/rs.3.rs-639869/v1

N/A

0DataRank · unranked

1 citations

Jason Willis, Jinzhuang Dou, Vakul Mohanty, Yuefan Huang, Eduardo Vilar +2 more

Bi-order multimodal integration of single-cell data

Genome biology(2022)10.1186/s13059-022-02679-x

N/A

0DataRank · unranked

75 citations

Shaoheng Liang, Vakul Mohanty, Qi Miao, Yuefan Huang, Qingnan Liang +11 more

Occult polyclonality of preclinical pancreatic cancer models drives in vitro evolution

Nature Communications(2022)10.1038/s41467-022-31376-3

N/A

0DataRank · unranked

29 citations

Heather Geiger, Jaewon J. Lee, Roshan Sharma, Alexander Semaan, Vincent Bernard +11 more

In-depth analysis of SARS-CoV-2–specific T cells reveals diverse differentiation hierarchies in vaccinated individuals

JCI Insight(2022)10.1172/jci.insight.156559

N/A

0DataRank · unranked

28 citations

Muharrem Müftüoğlu, Shaoheng Liang, Mahesh Basyal, Jiangxing Lv, Mehmet Emin Akdogan +5 more

Sensei: how many samples to tell a change in cell type abundance?

BMC Bioinformatics(2022)10.1186/s12859-021-04526-5

N/A

0DataRank · unranked

8 citations

Jason Willis, Jinzhuang Dou, Vakul Mohanty, Yuefan Huang, Eduardo Vilar +2 more

Single-cell CRISPR immune screens reveal immunological roles of tumor intrinsic factors

NAR Cancer(2022)10.1093/narcan/zcac038

N/A

0DataRank · unranked

5 citations

Shaoheng Liang, Chunyu Xu, Yanjun Wei, Yunfei Wang, Yukun Tan +12 more

Integrated multi-omics analyses identify key anti-viral host factors and pathways controlling SARS-CoV-2 infection

Research Square(2022)10.21203/rs.3.rs-1910932/v1

N/A

0DataRank · unranked

11 citations

Yanjun Wei, Jing Zou, Roshni Jaffery, Shaoheng Liang, Caishang Zheng +6 more

Loss of metabolic fitness drives tumor resistance after CAR-NK cell therapy and can be overcome by cytokine engineering

Science Advances(2023)10.1126/sciadv.add6997

N/A

0DataRank · unranked

107 citations

Vakul Mohanty, Jinzhuang Dou, Yuefan Huang, Pinaki P. Banerjee, Qi Miao +25 more

Single-cell chromatin accessibility profiling of acute myeloid leukemia reveals heterogeneous lineage composition upon therapy-resistance

Communications Biology(2023)10.1038/s42003-023-05120-6

N/A

0DataRank · unranked

16 citations

Feng Wang, Andy G.X. Zeng, Alex Murison, Katarzyna Tomczak, Dapeng Hao +14 more

Stromal-derived NRG1 enables oncogenic KRAS bypass in pancreas cancer

Genes & Development(2023)10.1101/gad.351037.123

N/A

0DataRank · unranked

25 citations

Jiaqian Xu, Yonghong Liu, Shaoheng Liang, Kyle A. LaBella, Deepavali Chakravarti +4 more

Integrated multi-omics analyses identify anti-viral host factors and pathways controlling SARS-CoV-2 infection

Nature Communications(2024)10.1038/s41467-023-44175-1

N/A

0DataRank · unranked

39 citations

Yanjun Wei, Jing Zou, Roshni Jaffery, Long Sun, Shaoheng Liang +16 more

Label-aware distance mitigates temporal and spatial variability for clustering and visualization of single-cell gene expression data

Communications Biology(2024)10.1038/s42003-024-05988-y

N/A

0DataRank · unranked

4 citations

Jinzhuang Dou, Ramiz Iqbal, Ken Chen, Shaoheng Liang

Depletion of effector regulatory T cells drives major response to induction dual immune checkpoint blockade

medRxiv(2024)10.1101/2024.01.04.23300616

N/A

0DataRank · unranked

0 citations

Nils-Petter Rudqvist, Bo Jiang, Shengbin Ye, Shan He, Qingnan Liang +25 more

Depletion of Effector Regulatory T Cells Associates with Major Response to Induction Dual Immune Checkpoint Blockade

Cancer Discovery(2025)10.1158/2159-8290.cd-24-1390

N/A

0DataRank · unranked

14 citations

Nils-Petter Rudqvist, Bo Jiang, Shengbin Ye, Shan He, Qingnan Liang +26 more

Steamboat: Attention-based multiscale delineation of cellular interactions in tissues

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.06.647437

N/A

0DataRank · unranked

4 citations

Junjie Tang, G.X. Wang, Jian Ma, Shaoheng Liang

HEIMDALL: Disentangling tokenizer design for robust transfer in single-cell foundation models

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.09.687403

N/A

0DataRank · unranked

2 citations

Shahul Alam, Nicholas Ho, Renming Liu, Evan Trop, Shaoheng Liang +4 more

TissueNarrator: Generative Modeling of Spatial Transcriptomics with Large Language Models

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.24.690325

N/A

0DataRank · unranked

0 citations

Junjie Tang, Jian Ma, Shaoheng Liang, Sizhe Liu