Milan Sonka

Computer ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 45 papers. Top paper: “3D Slicer as an image computing platform for the Quantitative Imaging Network”.

3D Slicer as an image computing platform for the Quantitative Imaging Network

Magnetic Resonance Imaging(2012)10.1016/j.mri.2012.05.001

N/A

1.4DataRank · unranked

8645 citations

Reinhard Beichel, Jayashree Kalpathy-Cramer, Julien Finet, Jean-Christophe Fillion-Robin, Sonia Pujol +13 more

Deep-COVID: Predicting COVID-19 from chest X-ray images using deep transfer learning

Medical Image Analysis(2020)10.1016/j.media.2020.101794

N/A

0DataRank · unranked

60 citations

Rahele Kafieh, Milan Sonka, Shakib Yazdani, Ghazaleh Jamalipour Soufi, Shervin Minaee

Fully automated 3D segmentation of MR-imaged calf muscle compartments: Neighborhood relationship enhanced fully convolutional network

Computerized Medical Imaging and Graphics(2020)10.1016/j.compmedimag.2020.101835

N/A

0DataRank · unranked

30 citations

Honghai Zhang, Zhi Chen, Ellen van der Plas, Laurie Gutmann, Daniel R. Thedens +3 more

Donor specific anti-HLA antibodies and cardiac allograft vasculopathy: A prospective study using highly automated 3-D optical coherence tomography analysis

Transplant Immunology(2020)10.1016/j.trim.2020.101340

N/A

0DataRank · unranked

8 citations

Helena Bedáňová, Zhi Chen, Josef Kautzner, Vojtěch Melenovský, Ivan Málek +10 more

A fully automated CT-based airway segmentation and branch labeling algorithm using deep learning and conventional image processing

(2020)10.17077/etd.005427

N/A

0DataRank · unranked

2 citations

Punam K. Saha, Alejandro P. Comellas, Eric A. Hoffman, Joseph M. Reinhardt, Milan Sonka +1 more

COVID TV-Unet: Segmenting COVID-19 chest CT images using connectivity imposed Unet

Computer Methods and Programs in Biomedicine Update(2021)10.1016/j.cmpbup.2021.100007

N/A

0DataRank · unranked

125 citations

Shervin Minaee, Rahele Kafieh, Shakib Yazdani, Milan Sonka, Narges Saeedizadeh

NeuriteNet: A convolutional neural network for assessing morphological parameters of neurite growth

Journal of Neuroscience Methods(2021)10.1016/j.jneumeth.2021.109349

N/A

0DataRank · unranked

23 citations

Sean Mullan, Josue A. Lopez, Marlan R. Hansen, Milan Sonka, Amy Lee +1 more

Quantitative muscle MRI as a sensitive marker of early muscle pathology in myotonic dystrophy type 1

Muscle & Nerve(2021)10.1002/mus.27174

N/A

0DataRank · unranked

17 citations

Laurie Gutmann, Dan Thedens, Richard K. Shields, Kathleen E. Langbehn, Zhihui Guo +3 more

Automated segmentation of choroidal layers from 3-dimensional macular optical coherence tomography scans

Journal of Neuroscience Methods(2021)10.1016/j.jneumeth.2021.109267

N/A

0DataRank · unranked

2 citations

Alexis Warren, Michael D. Abràmoff, Andreas Wahle, S. Scott Whitmore, Ian C. Han +6 more

KCB-Net: A 3D Knee Cartilage and Bone Segmentation Network via Sparse Annotation

Figshare(2021)10.36227/techrxiv.16611568.v1

N/A

0DataRank · unranked

1 citations

Hao Zheng, Fahim Zaman, Lichun Zhang, Xiaodong Wu, Milan Sonka +2 more

NeuriteNet: A Convolutional Neural Network for determining morphological differences in neurite growth

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.31.437885

N/A

0DataRank · unranked

0 citations

Sean Mullan, Josue A. Lopez, Marlan R. Hansen, Milan Sonka, Amy Lee +1 more

KCB-Net: A 3D Knee Cartilage and Bone Segmentation Network via Sparse Annotation

(2021)10.36227/techrxiv.16611568

N/A

0DataRank · unranked

0 citations

Hao Zheng, Fahim Zaman, Lichun Zhang, Xiaodong Wu, Milan Sonka +2 more

KCB-Net: A 3D knee cartilage and bone segmentation network via sparse annotation

Medical Image Analysis(2022)10.1016/j.media.2022.102574

N/A

0DataRank · unranked

18 citations

Hao Zheng, Peixian Liang, Lichun Zhang, Fahim Zaman, Xiaodong Wu +3 more

Machine-learning based investigation of prognostic indicators for oncological outcome of pancreatic ductal adenocarcinoma

Frontiers in Oncology(2022)10.3389/fonc.2022.895515

N/A

0DataRank · unranked

18 citations

Yanan Liu, Stephanie Saey, Kevin Chang, Hannah R. Shrader, Kelsey L. Steckly +4 more

CMC-Net: 3D calf muscle compartment segmentation with sparse annotation

Medical Image Analysis(2022)10.1016/j.media.2022.102460

N/A

0DataRank · unranked

10 citations

Hao Zheng, Li‐Chun Zhang, Milan Sonka, Danny Z. Chen, Yaopeng Peng

Fibrous Cap Thickness Predicts Stable Coronary Plaque Progression: Early Clinical Validation of a Semiautomated OCT Technology

Journal of the Society for Cardiovascular Angiography & Interventions(2022)10.1016/j.jscai.2022.100400

N/A

0DataRank · unranked

6 citations

Tomáš Kovárník, Zhi Chen, Joseph R. Weber, Brendan Martin, Amir Darki +5 more

Validation of a semi-automatic software for optical coherence tomography – analysis in heart transplanted patients

The International Journal of Cardiovascular Imaging(2022)10.1007/s10554-022-02722-9

N/A

0DataRank · unranked

6 citations

Zhi Chen, Tor Skibsted Clemmensen, Omeed Neghabat, Emil Nielsen Holck, Michal Pazderník +5 more

Segmentation Quality Assessment by Automated Detection of Erroneous Surface Regions in Medical Images

(2022)10.36227/techrxiv.19767661.v1

N/A

0DataRank · unranked

1 citations

Lichun Zhang, Honghai Zhang, Milan Sonka, Xiaodong Wu, Fahim Zaman

Segmentation Quality Assessment by Automated Detection of Erroneous Surface Regions in Medical Images

(2022)10.36227/techrxiv.19767661

N/A

0DataRank · unranked

0 citations

Lichun Zhang, Honghai Zhang, Milan Sonka, Xiaodong Wu, Fahim Zaman

Patch-wise 3D Segmentation Quality Assessment Combining Reconstruction and Regression Networks

(2022)10.36227/techrxiv.21218186

N/A

0DataRank · unranked

0 citations

Tarun Kanti Roy, Milan Sonka, Xiaodong Wu, Fahim Zaman

Patch-wise 3D Segmentation Quality Assessment Combining Reconstruction and Regression Networks

(2022)10.36227/techrxiv.21218186.v1

N/A

0DataRank · unranked

0 citations

Tarun Kanti Roy, Milan Sonka, Xiaodong Wu, Fahim Zaman

Can Artificial Intelligence Enhance Syncope Management?

JACC Advances(2023)10.1016/j.jacadv.2023.100323

N/A

0DataRank · unranked

14 citations

Aron Z. Evans, Samuel L. Johnston, Mehul Adhaduk, Avinash Mudireddy, Milan Sonka +14 more

Segmentation quality assessment by automated detection of erroneous surface regions in medical images

Computers in Biology and Medicine(2023)10.1016/j.compbiomed.2023.107324

N/A

0DataRank · unranked

13 citations

Li‐Chun Zhang, Honghai Zhang, Milan Sonka, Xiaodong Wu, Fahim Zaman

Assisted annotation in Deep LOGISMOS: Simultaneous multi‐compartment 3D MRI segmentation of calf muscles

Medical Physics(2023)10.1002/mp.16284

N/A

0DataRank · unranked

10 citations

Zhihui Guo, Honghai Zhang, Ellen van der Plas, Timothy R. Koscik, Peg Nopoulos +2 more

Caldendrin represses neurite regeneration and growth in dorsal root ganglion neurons

Scientific Reports(2023)10.1038/s41598-023-29622-9

N/A

0DataRank · unranked

6 citations

Annamarie Yamamoto, Joseph T. Vecchi, Jussara Hagen, Kyungmoo Lee, Milan Sonka +3 more

Using computed tomography to recover hidden medieval fragments beneath early modern leather bindings, first results

Heritage Science(2023)10.1186/s40494-023-00912-9

N/A

0DataRank · unranked

6 citations

Katherine H. Tachau, Susan A. Walsh, Honghai Zhang, G. Simon, Laura Moser +5 more

A Technique to Enable Efficient Adaptive Radiation Therapy: Automated Contouring of Prostate and Adjacent Organs

Advances in Radiation Oncology(2023)10.1016/j.adro.2023.101336

N/A

0DataRank · unranked

5 citations

Joseph M. Caster, Blake Smith, Joël St‐Aubin, J. E. Snyder, Andrew Shepard +9 more

Kernel-weighted contribution: a method of visual attribution for 3D deep learning segmentation in medical imaging

Journal of Medical Imaging(2023)10.1117/1.jmi.10.5.054001

N/A

0DataRank · unranked

4 citations

Milan Sonka, Sean Mullan

Patch-wise 3D segmentation quality assessment combining reconstruction and regression networks

Journal of Medical Imaging(2023)10.1117/1.jmi.10.5.054002

N/A

0DataRank · unranked

4 citations

Tarun Kanti Roy, Milan Sonka, Xiaodong Wu, Fahim Zaman

Role of genetics in the development of cardiac allograft vasculopathy

Bratislavské lekárske listy/Bratislava medical journal(2023)10.4149/bll_2023_031

N/A

0DataRank · unranked

3 citations

Anna Chaloupka, Peter Wohlfahrt, Jaroslav A. Hubáček, Helena Bedáňová, Zhi Chen +10 more

Sensitivity of CNN image analysis to multifaceted measurements of neurite growth

BMC Bioinformatics(2023)10.1186/s12859-023-05444-4

N/A

0DataRank · unranked

2 citations

Sean Mullan, Josue A. Lopez, Madeline Rhomberg, Annamarie Yamamoto, A Hallam +4 more

Segmentation Quality Assessment by Automated Detection of Erroneous Surface Regions in Medical Images

INDIGO (University of Illinois at Chicago)(2023)10.36227/techrxiv.19767661.v2

N/A

0DataRank · unranked

2 citations

Lichun Zhang, Honghai Zhang, Milan Sonka, Xiaodong Wu, Fahim Zaman

Efficient Deep-Learning-Assisted Annotation for Medical Image Segmentation

INDIGO (University of Illinois at Chicago)(2023)10.36227/techrxiv.23420516.v1

N/A

0DataRank · unranked

2 citations

Zhi Chen, Honghai Zhang, Fahim Zaman, Andreas Wahle, Xiaodong Wu +2 more

PHG-Net: Persistent Homology Guided Medical Image Classification

arXiv (Cornell University)(2023)10.48550/arxiv.2311.17243

N/A

0DataRank · unranked

2 citations

Hongxiao Wang, Milan Sonka, Danny Z. Chen, Yaopeng Peng

Patch-wise 3D Segmentation Quality Assessment Combining Reconstruction and Regression Networks

Figshare(2023)10.36227/techrxiv.21218186.v2

N/A

0DataRank · unranked

0 citations

Tarun Kanti Roy, Milan Sonka, Xiaodong Wu, Fahim Zaman

Efficient Deep-Learning-Assisted Annotation for Medical Image Segmentation

(2023)10.36227/techrxiv.23420516

N/A

0DataRank · unranked

0 citations

Zhi Chen, Honghai Zhang, Fahim Zaman, Andreas Wahle, Xiaodong Wu +2 more

Trust, but Verify: Robust Image Segmentation using Deep Learning

arXiv (Cornell University)(2023)10.48550/arxiv.2310.16999

N/A

0DataRank · unranked

0 citations

Xiaodong Wu, Weiyu Xu, Milan Sonka, Raghuraman Mudumbai, Fahim Zaman

Acetylsalicylic acid use and development of cardiac allograft vasculopathy: A national prospective study using highly automated 3‐D optical coherence tomography analysis

Clinical Transplantation(2024)10.1111/ctr.15275

N/A

0DataRank · unranked

1 citations

Peter Wohlfahrt, Milan Sonka, Zhi Chen, Josef Kautzner, Vojtěch Melenovský +9 more

Contrastive Generative Self-Supervised Learning for 3D Medical Image Segmentation

(2024)10.36227/techrxiv.172953448.85699324/v1

N/A

0DataRank · unranked

0 citations

Honghai Zhang, Peter N Nau, Milan Sonka, Lichun Zhang

Sli2Vol+: Segmenting 3D Medical Images Based on an Object Estimation Guided Correspondence Flow Network

arXiv (Cornell University)(2024)10.48550/arxiv.2411.13873

N/A

0DataRank · unranked

0 citations

Pengfei Gu, Milan Sonka, Chaoli Wang, Danny Z. Chen, Delin An

Latent diffusion for medical image segmentation: End-to-end learning for fast sampling and accuracy

Biomedical Signal Processing and Control(2025)10.1016/j.bspc.2025.109380

N/A

0DataRank · unranked

2 citations

Mathews Jacob, Amanda Chang, Kan Liu, Milan Sonka, Xiaodong Wu +1 more

Sli2Vol+: Segmenting 3D Medical Images Based on an Object Estimation Guided Correspondence Flow Network*

PubMed(2025)10.1109/wacv61041.2025.00357

N/A

0DataRank · unranked

4 citations

Pengfei Gu, Milan Sonka, Chaoli Wang, Danny Z. Chen, Delin An

Spectral U-Net: Enhancing Medical Image Segmentation via Spectral Decomposition

(2025)10.1109/isbi60581.2025.10981199

N/A

0DataRank · unranked

7 citations

Danny Z. Chen, Milan Sonka, Yaopeng Peng

Fully automated IVUS image segmentation with efficient deep-learning-assisted annotation

Computers in Biology and Medicine(2025)10.1016/j.compbiomed.2025.111312

N/A

0DataRank · unranked

0 citations

Zhi Chen, Honghai Zhang, Fahim Zaman, Andreas Wahle, Xiaodong Wu +4 more

Risk Stratification and Coronary Optical Coherence Tomography Findings in Asymptomatic Patients With Type 1 Diabetes Mellitus

Physiological Research(2025)10.33549/physiolres.935614

N/A

0DataRank · unranked

0 citations

Michal Dubský, Peter Wohlfahrt, NATÁLIA MARHEFKOVÁ, Zhi Chen, Milan Sonka +5 more