Hani Goodarzi

Arc Research Institute

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.241Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A global cancer data integrator reveals principles of synthetic lethality, sex disparity and immunotherapy

Genome Medicine(2021)10.1186/s13073-021-00987-8

Top 61%

0.241DataRank

Top 61%4 citations

Abolfazl Arab, Justin R. Pritchard, Hani Goodarzi, Luke A. Gilbert, Christopher Yogodzinski

Papers

Driven by 63 papers — median percentile 39. Top paper: “Androgen Signaling Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men”.

Androgen Signaling Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men

Cell stem cell(2020)10.1016/j.stem.2020.11.009

N/A

7.3DataRank · unranked

251 citations

Homa Majd, Mikayla N Richter, Zaniar Ghazizadeh, Seyedeh M. Zekavat, Albertas Navickas +19 more

Massively multiplex single-molecule oligonucleosome footprinting

eLife(2020)10.7554/elife.59404

N/A

3.4DataRank · unranked

129 citations

Colin P McNally, Laura J Hsieh, Sivakanthan Kasinathan, Aidan Keith, Laurel S. Estes +6 more

To Transformers and Beyond: Large Language Models for the Genome

arXiv (Cornell University)(2023)10.48550/arxiv.2311.07621

N/A

1.2DataRank · unranked

32 citations

Cameron Dufault, Michael Wainberg, Duncan Forster, Mehran Karimzadeh, Hani Goodarzi +4 more

Towards multimodal foundation models in molecular cell biology

Nature(2025)10.1038/s41586-025-08710-y

N/A

1.2DataRank · unranked

88 citations

Alejandro Tejada-Lapuerta, Maria Brbić, Julio Saez-Rodriguez, Simona Cristea, Hani Goodarzi +4 more

Transformers and genome language models

Nature Machine Intelligence(2025)10.1038/s42256-025-01007-9

N/A

0.593DataRank · unranked

51 citations

Cameron Dufault, Michael Wainberg, Duncan Forster, Mehran Karimzadeh, Hani Goodarzi +4 more

A global cancer data integrator reveals principles of synthetic lethality, sex disparity and immunotherapy

Genome Medicine(2021)10.1186/s13073-021-00987-8

Top 61%

0.241DataRank

Top 61%4 citations

Abolfazl Arab, Justin R. Pritchard, Hani Goodarzi, Luke A. Gilbert, Christopher Yogodzinski

Neuronal Nsun2 deficiency produces tRNA epitranscriptomic alterations and proteomic shifts impacting synaptic signaling and behavior

Nature Communications(2021)10.1038/s41467-021-24969-x

N/A

0DataRank · unranked

94 citations

Albertas Navickas, Hannah Phillips, Søren Heissel, Amara Plaza-Jennings, Sohit Miglani +18 more

A prometastatic splicing program regulated by SNRPA1 interactions with structured RNA elements

Science(2021)10.1126/science.abc7531

N/A

0DataRank · unranked

77 citations

Matvei Khoroshkin, Albertas Navickas, Kristle Garcia, Bruce Culbertson, Benjamin Hänisch +10 more

Targeting KRAS4A splicing through the RBM39/DCAF15 pathway inhibits cancer stem cells

Nature Communications(2021)10.1038/s41467-021-24498-7

N/A

0DataRank · unranked

49 citations

Minh D. To, Peter M.K. Westcott, Reyno Delrosario, Il-Jin Kim, Mark R. Philips +7 more

Revealing molecular pathways for cancer cell fitness through a genetic screen of the cancer translatome

Cell Reports(2021)10.1016/j.celrep.2021.109321

N/A

0DataRank · unranked

14 citations

Zhiqiang Hu, Martina Rama, Emily N. Devericks, Jacob Weiss, Gary G. Chiang +6 more

A focal adhesion kinase-YAP signaling axis drives drug tolerant persister cells and residual disease in lung cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.23.465573

N/A

0DataRank · unranked

18 citations

Celia Fernández-Méndez, Lauren Čech, Johnny Yu, Ismail M. Meraz, Victor Olivas +28 more

An mRNA processing pathway suppresses metastasis by governing translational control from the nucleus

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.04.463118

N/A

0DataRank · unranked

7 citations

Hosseinali Asgharian, Juliane Winkler, Lisa Fish, Kristle Garcia, Daniel Markett +12 more

Zebrafish xenografts to isolate unique human breast cancer metastatic cell populations

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.07.471608

N/A

0DataRank · unranked

2 citations

Joseph R. McGill, Apsra Nasir, Alexander Lekan, Bailey Johnson, Devan J. Wilkins +7 more

A sense-antisense RNA interaction promotes breast cancer metastasis via regulation of NQO1 expression

Research Square(2021)10.21203/rs.3.rs-967511/v1

N/A

0DataRank · unranked

1 citations

Kristle Garcia, Daniel Markett, Hosseinali Asgharian, Li Chen, Lisa Fish +7 more

A systematic comparison of fibroblasts derived from postmortem human dura mater versus dermal epithelium for neurodegenerative disease modeling

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.17.444554

N/A

0DataRank · unranked

0 citations

Celica Cosme, Kristle Garcia, Christian Corrales, Alissa L. Nana, Anna M. Karydas +7 more

PAI-1 is a potential transcriptional silencer that supports bladder cancer cell activity

Scientific Reports(2022)10.1038/s41598-022-16518-3

N/A

0DataRank · unranked

30 citations

Yuka Sasaki, Runpu Chen, Rafael Peres, Kanani Hokutan, Kaoru Murakami +13 more

Identifying drivers of breast cancer metastasis in progressively invasive subpopulations of zebrafish-xenografted MDA-MB-231

Molecular Biomedicine(2022)10.1186/s43556-022-00080-5

N/A

0DataRank · unranked

7 citations

Joseph R. McGill, Apsra Nasir, Alexander Lekan, Bailey Johnson, Devan J. Wilkins +7 more

hPSC-Derived Enteric Ganglioids Model Human ENS Development and Function

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.04.474746

N/A

0DataRank · unranked

9 citations

Ryan M. Samuel, Jonathan T. Ramirez, Ali Kalantari‐Hesari, Kevin Barber, Zaniar Ghazizadeh +17 more

Deriving Schwann Cells from hPSCs Enables Disease Modeling and Drug Discovery for Diabetic Peripheral Neuropathy

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.16.504209

N/A

0DataRank · unranked

5 citations

Sadaf Amin, Zaniar Ghazizadeh, Andrius Cesiulis, Edgardo J. Arroyo, Karen L. Lankford +15 more

Propagated circulating tumor cells uncovers the role of NFκB and COP1 in metastasis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.09.519805

N/A

0DataRank · unranked

0 citations

Utsav Sharma, Abolfazl Arab, Sohit Miglani, Sonakshi Bhalla, Shravanthy Suguru +13 more

Circulating tumor nucleic acids: biology, release mechanisms, and clinical relevance

Molecular Cancer(2023)10.1186/s12943-022-01710-w

N/A

0DataRank · unranked

270 citations

Hani Goodarzi, Josef Srovnal, Marián Hajdúch, L. J. van ‘t Veer, Mark Jesus M. Magbanua +1 more

ENPP1 is an innate immune checkpoint of the anticancer cGAMP–STING pathway in breast cancer

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2313693120

N/A

0DataRank · unranked

70 citations

Volker Böhnert, Alby J. Joseph, Valentino Sudaryo, Gemini Skariah, Jason Swinderman +9 more

Deriving Schwann cells from hPSCs enables disease modeling and drug discovery for diabetic peripheral neuropathy

Cell stem cell(2023)10.1016/j.stem.2023.04.006

N/A

0DataRank · unranked

48 citations

Sadaf Amin, Zaniar Ghazizadeh, Andrius Cesiulis, Edgardo J. Arroyo, Karen L. Lankford +17 more

A sense-antisense RNA interaction promotes breast cancer metastasis via regulation of NQO1 expression

Nature Cancer(2023)10.1038/s43018-023-00554-7

N/A

0DataRank · unranked

44 citations

Kristle Garcia, Daniel Markett, Hosseinali Asgharian, Li Chen, Lisa Fish +9 more

An mRNA processing pathway suppresses metastasis by governing translational control from the nucleus

Nature Cell Biology(2023)10.1038/s41556-023-01141-9

N/A

0DataRank · unranked

40 citations

Hosseinali Asgharian, Juliane Winkler, Lisa Fish, Kristle Garcia, Daniel Markett +13 more

SYF2 suppression mitigates neurodegeneration in models of diverse forms of ALS

Cell stem cell(2023)10.1016/j.stem.2023.01.005

N/A

0DataRank · unranked

28 citations

Yichen Li, Wen-Hsuan Chang, Jasper Rubin-Sigler, Stacee Mendonca, Sarah Hong +23 more

7SK methylation by METTL3 promotes transcriptional activity

Science Advances(2023)10.1126/sciadv.ade7500

N/A

0DataRank · unranked

23 citations

Anthony W. Desotell, Hengyi Li, Wenxue Li, Bing Han, Qishan Lin +5 more

A bi-steric mTORC1-selective inhibitor overcomes drug resistance in breast cancer

Oncogene(2023)10.1038/s41388-023-02737-z

N/A

0DataRank · unranked

15 citations

Xin Zhao, Yu Chi Yang, Albertas Navickas, Ciara Helland, Hani Goodarzi +3 more

Computational drug repositioning for the identification of new agents to sensitize drug-resistant breast tumors across treatments and receptor subtypes

Frontiers in Oncology(2023)10.3389/fonc.2023.1192208

N/A

0DataRank · unranked

5 citations

Amrita Basu, Christina Yau, Denise M. Wolf, Hani Goodarzi, Sourav Bandyopadhyay +10 more

Autism genes converge on microtubule biology and RNA-binding proteins during excitatory neurogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.22.573108

N/A

0DataRank · unranked

18 citations

Noam Teyssier, Belinda Wang, Sam Drake, Meghan Seyler, Yefim Zaltsman +8 more

ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.01.543353

N/A

0DataRank · unranked

10 citations

Volker Böhnert, Alby J. Joseph, Valentino Sudaryo, Jason Swinderman, Feiqiao B. Yu +7 more

Single-nucleus transcriptome atlas of orbitofrontal cortex in amyotrophic lateral sclerosis with a deep learning-based decoding of alternative polyadenylation mechanisms

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.22.573083

N/A

0DataRank · unranked

9 citations

Aiden M. Sababi, Raghav Sharma, Zhiyu Xu, Shangxi Xiao, Philip McGoldrick +12 more

Inhibition of muscarinic receptor signaling protects human enteric inhibitory neurons against platin chemotherapy toxicity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.08.531806

N/A

0DataRank · unranked

4 citations

Sina Farahvashi, Ryan M. Samuel, Homa Majd, Angeline K Chemel, Jonathan T. Ramirez +22 more

A systematic search for RNA structural switches across the human transcriptome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.11.532161

N/A

0DataRank · unranked

4 citations

Daniel Asarnow, Albertas Navickas, Aidan Winters, Johnny Yu, Simon K. Zhou +8 more

RPL22 is a tumor suppressor in MSI-high cancers and a key splicing regulator of MDM4

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.10.570873

N/A

0DataRank · unranked

4 citations

Kevin Hu, Lisa Fish, Yih-An Chen, Paul Allegakoen, Keliana Hui +9 more

Generation of Schwann cell derived melanocytes from hPSCs identifies pro-metastatic factors in melanoma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.06.531220

N/A

0DataRank · unranked

3 citations

Albertas Navickas, Ashley Maynard, Eliza A. Gaylord, Kristle Garcia, Samyukta Bhat +13 more

Gene networks reveal stem-cell state convergence during preneoplasia and progression to malignancy in multistage skin carcinogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.08.539863

N/A

0DataRank · unranked

2 citations

Eve Kandyba, Kyle Halliwill, Reyno Delrosario, Matvei Koroshkin, Hani Goodarzi +8 more

Integrative identification of non-coding regulatory regions driving metastatic prostate cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.14.535921

N/A

0DataRank · unranked

1 citations

Ruhollah Moussavi-Baygi, Heather Karner, Mehran Karimzadeh, Kristle Garcia, Tanvi Joshi +8 more

Computational drug repositioning for the identification of new agents to sensitize drug-resistant breast tumors across treatments and receptor subtypes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.30.534178

N/A

0DataRank · unranked

0 citations

Amrita Basu, Christina Yau, Denise M. Wolf, Hani Goodarzi, Sourav Bandyopadhyay +11 more

Learning chemical sensitivity reveals mechanisms of cellular response

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.26.554851

N/A

0DataRank · unranked

0 citations

Kristle Garcia, Hani Goodarzi, Michael J. Keiser, William Connell

Focal adhesion kinase-YAP signaling axis drives drug-tolerant persister cells and residual disease in lung cancer

Nature Communications(2024)10.1038/s41467-024-47423-0

N/A

0DataRank · unranked

88 citations

Yu‐Ting Chou, Lauren Čech, Celia Fernández-Méndez, Johnny Yu, Victor Olivas +30 more

Glycosphingolipid synthesis mediates immune evasion in KRAS-driven cancer

Nature(2024)10.1038/s41586-024-07787-1

N/A

0DataRank · unranked

85 citations

Gökhan Ünlü, Rachel L. Welch, Aleksey Chudnovskiy, Beste Uygur, Vyom Shah +11 more

Identification of the extracellular membrane protein ENPP3 as a major cGAMP hydrolase and innate immune checkpoint

Cell Reports(2024)10.1016/j.celrep.2024.114209

N/A

0DataRank · unranked

37 citations

Songnan Wang, Jacqueline A. Carozza, Bahar Zirak, Vishvak Subramanyam, Gita C. Abhiraman +4 more

Direct transposition of native DNA for sensitive multimodal single-molecule sequencing

Nature Genetics(2024)10.1038/s41588-024-01748-0

N/A

0DataRank · unranked

27 citations

Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S. Clugston +9 more

Translational adaptation in breast cancer metastasis and emerging therapeutic opportunities

Trends in Pharmacological Sciences(2024)10.1016/j.tips.2024.02.002

N/A

0DataRank · unranked

20 citations

Albertas Navickas, Hani Goodarzi, Siyu Chen

RPL22 is a tumor suppressor in MSI-high cancers and a splicing regulator of MDM4

Cell Reports(2024)10.1016/j.celrep.2024.114622

N/A

0DataRank · unranked

20 citations

Kevin Hu, Lisa Fish, Yih-An Chen, Paul Allegakoen, Julia H. Pham +12 more

A systematic search for RNA structural switches across the human transcriptome

Nature Methods(2024)10.1038/s41592-024-02335-1

N/A

0DataRank · unranked

15 citations

Daniel Asarnow, Shaopu Zhou, Albertas Navickas, Aidan Winters, Jackson Goudreau +12 more

pyPAGE: A framework for Addressing biases in gene-set enrichment analysis—A case study on Alzheimer’s disease

PLoS Computational Biology(2024)10.1371/journal.pcbi.1012346

N/A

0DataRank · unranked

7 citations

Noam Teyssier, Martin Kampmann, Matvei Khoroshkin, Hani Goodarzi, Artemy Bakulin

Functional microRNA-targeting drug discovery by graph-based deep learning

Patterns(2024)10.1016/j.patter.2023.100909

N/A

0DataRank · unranked

6 citations

Milad Salem, Heather Karner, Kristle Garcia, Abolfazl Arab, J.S. Yuan +2 more

Integrative identification of non-coding regulatory regions driving metastatic prostate cancer

Cell Reports(2024)10.1016/j.celrep.2024.114764

N/A

0DataRank · unranked

4 citations

Ruhollah Moussavi-Baygi, Heather Karner, Mehran Karimzadeh, Hassan Yousefi, Sean M. Lee +10 more

Learning chemical sensitivity reveals mechanisms of cellular response

Communications Biology(2024)10.1038/s42003-024-06865-4

N/A

0DataRank · unranked

3 citations

Kristle Garcia, Hani Goodarzi, Michael J. Keiser, William Connell

A multiomics approach reveals RNA dynamics promote cellular sensitivity to DNA hypomethylation

Scientific Reports(2024)10.1038/s41598-024-77314-9

N/A

0DataRank · unranked

3 citations

Abolfazl Arab, Raymond Dai, Albertas Navickas, Lisa Fish, Kristle Garcia +10 more

Systematic annotation of orphan RNAs reveals blood-accessible molecular barcodes of cancer identity and cancer-emergent oncogenic drivers

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.19.585748

N/A

0DataRank · unranked

6 citations

Jung Min Suh, Brian J Woo, Albertas Navickas, Kristle Garcia, Keyi Yin +11 more

Identifying a gene signature of metastatic potential by linking pre-metastatic state to ultimate metastatic fate

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.14.607813

N/A

0DataRank · unranked

0 citations

Zijie Li, Rachel Dveirin, Weixiang Fang, Hani Goodarzi, Elana J. Fertig +2 more

Functional screen identifies RBM42 as a mediator of oncogenic mRNA translation specificity

Nature Cell Biology(2025)10.1038/s41556-024-01604-7

N/A

0DataRank · unranked

12 citations

Goksu Sarioglu, Vishvak Subramanyam, Grace A. Hernandez, Gilles Rademaker, Juan A. Osés-Prieto +12 more

Altered tRNA expression profile associated with codon-specific proteomic changes in the suicide brain

Molecular Psychiatry(2025)10.1038/s41380-025-02891-8

N/A

0DataRank · unranked

3 citations

Shanshan Chen, Søren Heissel, Hanan Alwaseem, M Macías, Cyril Peter +6 more

A cell-state axis underlying colonization in carcinomas with implications for metastasis risk prediction and interception

Cell Reports(2025)10.1016/j.celrep.2025.116701

N/A

0DataRank · unranked

0 citations

Zijie Li, Rachel K. Dveirin, Jeff Lin, Weixiang Fang, Shihan Wu +7 more

Integrative analysis of mRNA stability regulation uncovers a metastasis-suppressive program in breast cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.06.658309

N/A

0DataRank · unranked

1 citations

Tabea Mittmann, Vicky Chen, Ashir A. Borah, Adrianus J. de Langen, Hassan Yousefi +5 more

Tumoural activation of TLR3–SLIT2 axis in endothelium drives metastasis

Nature(2020)10.1038/s41586-020-2774-y

N/A

0DataRank · unranked

150 citations

Tobias Mederer, Kai J. Wessel, Simon Ruffing, Mahan Sadjadi, Marc Missmahl +8 more

Functional Genomics In Vivo Reveal Metabolic Dependencies of Pancreatic Cancer Cells

Cell Metabolism(2020)10.1016/j.cmet.2020.10.017

N/A

0DataRank · unranked

130 citations

Aleksey Chudnovskiy, Lou Baudrier, Benjamin Prizer, Yuyang Liu, Benjamin N. Ostendorf +11 more

RBMS1 Suppresses Colon Cancer Metastasis through Targeted Stabilization of Its mRNA Regulon

Cancer Discovery(2020)10.1158/2159-8290.cd-19-1375

N/A

0DataRank · unranked

65 citations

Albertas Navickas, Hosseinali Asgharian, Bruce Culbertson, Lisa Fish, Kristle Garcia +11 more

Androgen Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.12.091082

N/A

0DataRank · unranked

62 citations

Homa Majd, Mikayla N Richter, Ryan M. Samuel, Seyedeh M. Zekavat, Hosseinali Asgharian +8 more

ERα is an RNA-binding protein sustaining tumor cell survival and drug resistance

Cell(2021)10.1016/j.cell.2021.08.036

N/A

0DataRank · unranked

174 citations

Peiwei Huangyang, Ying Wang, Lingru Xue, Emily N. Devericks, Hao G. Nguyen +7 more

Hani Goodarzi

Indexed papers

Top data-sharing exemplar

Papers