🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Qiao Liu

Shandong University

ORCID: 0000-0002-9781-3360

Also affiliated with Yale University, Tsinghua University

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.892Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

HiChIPdb: a comprehensive database of HiChIP regulatory interactions

Nucleic Acids Research(2022)10.1093/nar/gkac859
Top 23%
0.892DataRank
Top 23%34 citations

Qiao Liu, Qijin Yin, Rui Jiang, Wing Hung Wong, Wanwen Zeng

Papers

Driven by 19 papers — median percentile 77. Top paper: “Glacial Lake Expansion in the Central Himalayas by Landsat Images, 1990–2010”.

Glacial Lake Expansion in the Central Himalayas by Landsat Images, 1990–2010

PLoS ONE(2013)10.1371/journal.pone.0083973
N/A
5.8DataRank · unranked
158 citations

Qiao Liu, Shiyin Liu, Yong Nie

Multimodal single cell data integration challenge: results and lessons learned

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.11.487796
N/A
2.5DataRank · unranked
79 citations

Malte D. Luecken, Daniel B. Burkhardt, Robrecht Cannoodt, Pia Rautenstrauch, Anna Laddach +13 more

HiChIPdb: a comprehensive database of HiChIP regulatory interactions

Nucleic Acids Research(2022)10.1093/nar/gkac859
Top 23%
0.892DataRank
Top 23%34 citations

Qiao Liu, Qijin Yin, Rui Jiang, Wing Hung Wong, Wanwen Zeng

Hierarchical multi-omics data integration and modeling predict cell-specific chemical proteomics and drug responses

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100452
N/A
0.601DataRank · unranked
18 citations

Qiao Liu, Lei Xie, You Wu

High-resolution characterization of gene function using single-cell CRISPR tiling screen

Nature Communications(2021)10.1038/s41467-021-24324-0
N/A
0.574DataRank · unranked
45 citations

Anthony Chan, Kazuya Miyashita, Christopher D. Delaney, Xi Wang, Hongzhi Li +21 more

High-resolution characterization of gene function using single-cell CRISPR tiling screen

Research Square(2021)10.21203/rs.3.rs-135816/v1
N/A
0DataRank · unranked
1 citations

Anthony Chan, Kazuya Miyashita, Christopher D. Delaney, Xi Wang, Hongzhi Li +21 more

Multi-scale predictive modeling discovers Ibudilast as a polypharmacological agent to improve hippocampal-dependent spatial learning and memory and mitigate plaque and tangle pathology in a transgenic rat model of Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.06.438662
N/A
0DataRank · unranked
0 citations

Charles H. Wallace, Osama Chaudry, Qiao Liu, Yue Qiu, Lei Xie +4 more

Regulatory analysis of single cell multiome gene expression and chromatin accessibility data with scREG

Genome biology(2022)10.1186/s13059-022-02682-2
N/A
0DataRank · unranked
42 citations

Fengge Chang, Fnu Naqing, Jingxue Xin, Qiao Liu, Wing Hung Wong +1 more

Therapeutic Target Discovery Using High-Throughput Genetic Screens in Acute Myeloid Leukemia

Cells(2020)10.3390/cells9081888
N/A
0DataRank · unranked
9 citations

Michelle Garcia, Shaoyuan Wang, Chun‐Wei Chen, Qiao Liu

DeepCAGE: Incorporating Transcription Factors in Genome-Wide Prediction of Chromatin Accessibility

Genomics Proteomics & Bioinformatics(2022)10.1016/j.gpb.2021.08.015
N/A
0DataRank · unranked
18 citations

Kui Hua, Xuegong Zhang, Wing Hung Wong, Rui Jiang, Qiao Liu

Small molecule modulation of microbiota: a systems pharmacology perspective

BMC Bioinformatics(2022)10.1186/s12859-022-04941-2
N/A
0DataRank · unranked
2 citations

Bohyun Lee, Lei Xie, Qiao Liu

Comprehensive tissue deconvolution of cell-free DNA by deep learning for disease diagnosis and monitoring

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2305236120
N/A
0DataRank · unranked
76 citations

Weihua Zeng, Xiaohui Ni, Qiao Liu, Wenyuan Li, Mary L. Stackpole +17 more

Epigenetic Control of Translation Checkpoint and Tumor Progression via RUVBL1‐EEF1A1 Axis

Advanced Science(2023)10.1002/advs.202206584
N/A
0DataRank · unranked
26 citations

Lu Yang, Anthony Chan, Sheela Pangeni Pokharel, Qiao Liu, Nicole Mattson +20 more

EpiGePT: a Pretrained Transformer model for epigenomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.15.549134
N/A
0DataRank · unranked
17 citations

Qiao Liu, Wanwen Zeng, Rui Jiang, Wing Hung Wong, Zijing Gao

An encoding generative modeling approach to dimension reduction and covariate adjustment in causal inference with observational studies

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2322376121
N/A
0DataRank · unranked
7 citations

Zhongren Chen, Wing Hung Wong, Qiao Liu

Improving polygenic prediction from whole-genome sequencing data by leveraging predicted epigenomic features

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2419202122
N/A
0DataRank · unranked
4 citations

Hanmin Guo, Qiao Liu, Wing Hung Wong, Wanwen Zeng

Simultaneous deep generative modeling and clustering of single cell genomic data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.17.254730
N/A
0DataRank · unranked
4 citations

Shengquan Chen, Rui Jiang, Wing Hung Wong, Qiao Liu

Sampling-guided Heterogeneous Graph Neural Network with Temporal Smoothing for Scalable Longitudinal Data Imputation

(2025)10.1145/3711896.3737116
N/A
0DataRank · unranked
1 citations

Ziqi Chen, Qiao Liu, Jinhan Xie, Hongtu Zhu, Zhaoyang Zhang

Generation and validation of CRISPR-engineered human natural killer cell lines for research and therapeutic applications

STAR Protocols(2021)10.1016/j.xpro.2021.100874
N/A
0DataRank · unranked
7 citations

Sung June Lee, Qiao Liu, Anthony Chan, Sheela Pangeni Pokharel, Jianhua Yu +3 more