John P. Cooke

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 57 papers. Top paper: “An ERK5-NRF2 Axis Mediates Senescence-Associated Stemness and Atherosclerosis”.

An ERK5-NRF2 Axis Mediates Senescence-Associated Stemness and Atherosclerosis

Circulation Research(2023)10.1161/circresaha.122.322017

N/A

0.837DataRank · unranked

39 citations

Masaki Imanishi, Shengyu Li, Aijun Zhang, Kyung Ae Ko, Venkata Subrahman K Samanthapudi +29 more

A relay velocity model infers cell-dependent RNA velocity

Nature Biotechnology(2024)10.1038/s41587-023-01728-5

N/A

0.712DataRank · unranked

114 citations

Pengzhi Zhang, Weiqing Chen, Lingqun Ye, Kristopher W. Brannan, Nhat-Tu Le +4 more

Microengineered Human Vein‐Chip Recreates Venous Valve Architecture and Its Contribution to Thrombosis

Small(2020)10.1002/smll.202003401

N/A

0.590DataRank · unranked

50 citations

Brandon K. Walther, Rishi Suresh, John P. Cooke, Abhishek Jain, Navaneeth Krishna Rajeeva Pandian

Design and rationale of re-energize fontan: Randomized exercise intervention designed to maximize fitness in fontan patients

American Heart Journal(2023)10.1016/j.ahj.2023.02.006

N/A

0.543DataRank · unranked

12 citations

Latha Palaniappan, Mary B. Leonard, Jin Long, Jonathan Myers, Tania Dávila +10 more

Cancer treatment-induced NAD+ depletion in premature senescence and late cardiovascular complications

The Journal of Cardiovascular Aging(2022)10.20517/jca.2022.13

N/A

0.345DataRank · unranked

9 citations

Elizabeth A. Olmsted‐Davis, Anita Deswal, Minh Tho Ho Nguyen, Efstratios Koutroumpakis, Nicholas L. Palaskas +16 more

A Potential Role for MAGI-1 in the Bi-Directional Relationship Between Major Depressive Disorder and Cardiovascular Disease

Current Atherosclerosis Reports(2024)10.1007/s11883-024-01223-5

N/A

0.292DataRank · unranked

6 citations

Khanh Chau, Sivareddy Kotla, Eleanor L. Davis, Estefani Berrios Turcios, Shengyu Li +8 more

Endothelial activation and fibrotic changes are impeded by laminar flow-induced CHK1-SENP2 activity through mechanisms distinct from endothelial-to-mesenchymal cell transition

Frontiers in Cardiovascular Medicine(2023)10.3389/fcvm.2023.1187490

N/A

0.269DataRank · unranked

5 citations

Masaki Imanishi, Shengyu Li, Khanh Chau, Priyanka Banerjee, Loka Reddy Velatooru +20 more

Application of validated size-exclusion chromatography method for physicochemical characterization of topical gel formulation of deferoxamine conjugated with PEGylated carbon nanoparticles

International Journal of Pharmaceutics(2024)10.1016/j.ijpharm.2024.124834

N/A

0.198DataRank · unranked

2 citations

Eman M. Mohamed, Mohammad Kashif Iqubal, James M. Tour, Emily A. McHugh, David F. Chang +4 more

Myocardial Recovery versus Myocardial Regeneration: Mechanisms and Therapeutic Modulation

Methodist DeBakey Cardiovascular Journal(2024)10.14797/mdcvj.1400

N/A

0.165DataRank · unranked

2 citations

Keith A. Youker, Li Lai, John P. Cooke

Exercise Capacity, Endothelial Function, Muscle Mass, and Strength in Pediatric Patients With Fontan Circulation

CJC Pediatric and Congenital Heart Disease(2025)10.1016/j.cjcpc.2025.10.010

N/A

0.165DataRank · unranked

2 citations

Latha Palaniappan, Mary B. Leonard, Jin Long, Joseph Dehoney, John P. Cooke +7 more

A visual–omics foundation model to bridge histopathology image with transcriptomics

Research Square(2025)10.21203/rs.3.rs-5183775/v1

N/A

0.104DataRank · unranked

1 citations

Weiqing Chen, Pengzhi Zhang, Tu Tran, Yiwei Xiao, Shengyu Li +15 more

Senescence-Associated Secretory Phenotype as a Hinge Between Cardiovascular Diseases and Cancer

Frontiers in Cardiovascular Medicine(2021)10.3389/fcvm.2021.763930

N/A

0DataRank · unranked

50 citations

Sivareddy Kotla, Loka Reddy Velatooru, Rei Abe, Elizabeth A. Olmsted‐Davis, John P. Cooke +7 more

Nucleus-mitochondria positive feedback loop formed by ERK5 S496 phosphorylation-mediated poly (ADP-ribose) polymerase activation provokes persistent pro-inflammatory senescent phenotype and accelerates coronary atherosclerosis after chemo-radiation

Redox Biology(2021)10.1016/j.redox.2021.102132

N/A

0DataRank · unranked

35 citations

Aijun Zhang, Masaki Imanishi, Kyung Ae Ko, Steven H. Lin, Young Jin Gi +30 more

mRNA-Enhanced Cell Therapy and Cardiovascular Regeneration

Cells(2021)10.3390/cells10010187

N/A

0DataRank · unranked

30 citations

Roman Sukhovershin, John P. Cooke, Palas K. Chanda

Fli1 + cells transcriptional analysis reveals an Lmo2–Prdm16 axis in angiogenesis

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2008559118

N/A

0DataRank · unranked

22 citations

Bo Xia, Kaifu Chen, Martin A. Denvir, Andrew H. Baker, John P. Cooke +1 more

Nuclear S-nitrosylation impacts tissue regeneration in zebrafish

Nature Communications(2021)10.1038/s41467-021-26621-0

N/A

0DataRank · unranked

22 citations

Sung Yun Jung, Jong Min Choi, Antrix Jain, Hon‐Chiu Eastwood Leung, Kimal Rajapakshe +6 more

Biomimetic and immunomodulatory therapeutics as an alternative to natural exosomes for vascular and cardiac applications

Nanomedicine Nanotechnology Biology and Medicine(2021)10.1016/j.nano.2021.102385

N/A

0DataRank · unranked

21 citations

John P. Cooke, Bruna Corradetti, Ramiro Alejandro Villarreal-Leal

Role of Endothelial and Mesenchymal Cell Transitions in Heart Failure and Recovery Thereafter

Frontiers in Genetics(2021)10.3389/fgene.2020.609262

N/A

0DataRank · unranked

15 citations

Ana Sofia Cruz, Keith A. Youker, Hernan G. Marcos-Abdala, Rajarajan A. Thandavarayan, John P. Cooke +4 more

MACMIC Reveals a Dual Role of CTCF in Epigenetic Regulation of Cell Identity Genes

Genomics Proteomics & Bioinformatics(2021)10.1016/j.gpb.2020.10.008

N/A

0DataRank · unranked

8 citations

Bo Xia, Man Zhou, Jie Lv, Dongyu Zhao, Yanqiang Li +8 more

Emerging nanotechnologies in cardiovascular medicine

Nanomedicine Nanotechnology Biology and Medicine(2021)10.1016/j.nano.2021.102472

N/A

0DataRank · unranked

2 citations

John P. Cooke, Alessandro Grattoni

RBFOX2 is required for establishing RNA regulatory networks essential for heart development

Nucleic Acids Research(2022)10.1093/nar/gkac055

N/A

0DataRank · unranked

50 citations

Vaibhav Deshmukh, Kaitlyn Thatcher, KarryAnne Belanger, Alexander M. Rhyner, Shu Meng +9 more

Vascular senescence in progeria: role of endothelial dysfunction

European Heart Journal Open(2022)10.1093/ehjopen/oeac047

N/A

0DataRank · unranked

36 citations

Anahita Mojiri, Luay Boulahouache, Elisa Morales, Brandon K. Walther, John P. Cooke +1 more

Long noncoding RNA LEENE promotes angiogenesis and ischemic recovery in diabetes models

Journal of Clinical Investigation(2022)10.1172/jci161759

N/A

0DataRank · unranked

35 citations

Yingjun Luo, Dongqiang Yuan, Riccardo Calandrelli, Naseeb Kaur Malhi, Kiran Sriram +15 more

Free Cholesterol Bioavailability and Atherosclerosis

Current Atherosclerosis Reports(2022)10.1007/s11883-022-01011-z

N/A

0DataRank · unranked

32 citations

Jun‐ichi Abe, Minh Thi Nguyen, Elizabeth A. Olmsted‐Davis, Abrar Mamun, Priyanka Banerjee +5 more

Coronary Microvascular Health in Patients With Prior COVID-19 Infection

JACC. Cardiovascular imaging(2022)10.1016/j.jcmg.2022.07.006

N/A

0DataRank · unranked

19 citations

Jean Michel Saad, Yushui Han, Fares Alahdab, Maan Malahfji, Faisal Nabi +5 more

At the nexus of science, engineering, and medicine: Pasteur's quadrant reconsidered

PNAS Nexus(2022)10.1093/pnasnexus/pgac092

N/A

0DataRank · unranked

7 citations

John P. Cooke, Roderic I. Pettigrew

Cardiac Shockwave Therapy – A Novel Therapy for Ischemic Cardiomyopathy?

Frontiers in Cardiovascular Medicine(2022)10.3389/fcvm.2022.875965

N/A

0DataRank · unranked

10 citations

Felix Nägele, Jakob Hirsch, Leo Pölzl, Victor Schweiger, Sophia Lechner +5 more

Radiation therapy induces immunosenescence mediated by p90RSK

Frontiers in Cardiovascular Medicine(2022)10.3389/fcvm.2022.988713

N/A

0DataRank · unranked

9 citations

Haizi Cheng, Sivareddy Kotla, Anita Deswal, Nhat-Tu Le, Eduardo N. Chini +20 more

MAGI1 inhibits interferon signaling to promote influenza A infection

Frontiers in Cardiovascular Medicine(2022)10.3389/fcvm.2022.791143

N/A

0DataRank · unranked

5 citations

Jun‐ichi Abe, Khanh Chau, Yongxing Wang, Hang Thi Vu, Loka Reddy Velatooru +15 more

Hospital-based RNA Therapeutics

Preprints.org(2022)10.20944/preprints202201.0073.v1

N/A

0DataRank · unranked

2 citations

Roman Sukhovershin, Min Zhang, Dániel Kiss, John P. Cooke, Tulsi Ram Damase

Epigenetic landscape reveals MECOM as an endothelial lineage regulator

Nature Communications(2023)10.1038/s41467-023-38002-w

N/A

0DataRank · unranked

49 citations

Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun‐Dae Kim +15 more

A2AR-mediated lymphangiogenesis via VEGFR2 signaling prevents salt-sensitive hypertension

European Heart Journal(2023)10.1093/eurheartj/ehad377

N/A

0DataRank · unranked

31 citations

Lei Yu, Jinjia Chang, Yanping Zhou, Yan Li, Yanxiu Li +11 more

Nanobiosensing with graphene and carbon quantum dots: Recent advances

Materials Today(2020)10.1016/j.mattod.2020.04.008

N/A

0DataRank · unranked

109 citations

Cerasela Zoica Dinu, Dirk M. Guldi, Vladimir G. Sergeyev, Stephen E. Creager, John P. Cooke +2 more

Coronary microvascular health in symptomatic patients with prior COVID-19 infection: an updated analysis

European Heart Journal - Cardiovascular Imaging(2023)10.1093/ehjci/jead118

N/A

0DataRank · unranked

16 citations

Mahmoud Al Rifai, Fares Alahdab, Jean Michel Saad, Yushui Han, Moath Said Alfawara +8 more

Role of angiogenic transdifferentiation in vascular recovery

Frontiers in Cardiovascular Medicine(2023)10.3389/fcvm.2023.1155835

N/A

0DataRank · unranked

12 citations

Li Lai, John P. Cooke

Premature senescence and cardiovascular disease following cancer treatments: mechanistic insights

Frontiers in Cardiovascular Medicine(2023)10.3389/fcvm.2023.1212174

N/A

0DataRank · unranked

9 citations

Diego Casanova, Alejandra Valdivia Padilla, Angelica Paniagua Bojorges, Sivareddy Kotla, Kyung Ae Ko +27 more

Disrupted stiffness ratio alters nuclear mechanosensing

Matter(2023)10.1016/j.matt.2023.08.010

N/A

0DataRank · unranked

4 citations

Adam P. Sears, Anahita Mojiri, Reza Avazmohammadi, Jianhua Gu, Olga V. Chumakova +8 more

Electrically stimulated gene expression under exogenously applied electric fields

Frontiers in Molecular Biosciences(2023)10.3389/fmolb.2023.1161191

N/A

0DataRank · unranked

9 citations

Abhishek Jain, John P. Cooke, Anthony Guiseppi‐Elie, Sara Abasi

EphrinB2-mediated CDK5/ISL1 pathway enhances cardiac lymphangiogenesis and alleviates ischemic injury by resolving post-MI inflammation

Signal Transduction and Targeted Therapy(2024)10.1038/s41392-024-02019-4

N/A

0DataRank · unranked

25 citations

Liming Chen, Fanghao Guo, Jinghong Zhang, Jinlin Hu, Xuefei Tao +15 more

β-catenin mRNA encapsulated in SM-102 lipid nanoparticles enhances bone formation in a murine tibia fracture repair model

Bioactive Materials(2024)10.1016/j.bioactmat.2024.05.020

N/A

0DataRank · unranked

16 citations

Chiara Mancino, Xueqin Gao, Joshua A. Choe, Laura Chubb, Katherine B. Williams +8 more

Next-generation precision medicine for suicidality prevention

Translational Psychiatry(2024)10.1038/s41398-024-03071-y

N/A

0DataRank · unranked

10 citations

Sapna Gill, H Le-Niculescu, C. Yin, K. Roseberry, J Mullen +14 more

Established and Emerging Nucleic Acid Therapies for Familial Hypercholesterolemia

Circulation(2024)10.1161/circulationaha.123.067957

N/A

0DataRank · unranked

9 citations

Roman Sukhovershin, Biana Godin, Khurram Nasir, John P. Cooke, Tulsi Ram Damase

TNIK regulation of interferon signaling and endothelial cell response to virus infection

Frontiers in Cardiovascular Medicine(2024)10.3389/fcvm.2023.1213428

N/A

0DataRank · unranked

3 citations

Abishai Dominic, Eleanor L. Davis, Sivareddy Kotla, Estefani Turcios Berrios, Arsany Fahim +14 more

Gallium disrupts endoplasmic reticulum iron metabolism to induce lipid metabolic reprogramming in glioblastoma cells

iScience(2025)10.1016/j.isci.2025.112404

N/A

0DataRank · unranked

3 citations

Jeffrey M. Stolwijk, Amira Zaher, Stephenson B. Owusu, John P. Cooke, Akalanka B. Ekanayake +4 more

APOA1 binding protein promotes lymphatic cell fate and lymphangiogenesis by relieving caveolae-mediated inhibition of VEGFR3 signaling

Nature Communications(2025)10.1038/s41467-025-60611-w

N/A

0DataRank · unranked

3 citations

Surbhi Chaudhary, Weiqing Chen, Jonathan W. Astin, Philip S. Crosier, Pengchun Yu +10 more

O-GlcNAcylation promotes angiogenic transdifferentiation to reverse vascular ischemia

Nature Cardiovascular Research(2025)10.1038/s44161-025-00673-7

N/A

0DataRank · unranked

3 citations

Angqi Lu, Eric S Nagueh, Yanqiang Li, Michael Graber, K. Carter +8 more

Transflammation in tissue regeneration and response to injury: How cell-autonomous inflammatory signaling mediates cell plasticity

Advanced Drug Delivery Reviews(2023)10.1016/j.addr.2023.115118

N/A

0DataRank · unranked

23 citations

Li Lai, John P. Cooke

Cytoskeleton stiffness regulates cellular senescence and innate immune response in Hutchinson–Gilford Progeria Syndrome

Aging Cell(2020)10.1111/acel.13152

N/A

0DataRank · unranked

92 citations

Chieh Tseng, William S. Hambright, Polina Matre, Chih‐Yi Lin, Palas K. Chanda +10 more

Reservoir of Fibroblasts Promotes Recovery From Limb Ischemia

Circulation(2020)10.1161/circulationaha.120.046872

N/A

0DataRank · unranked

64 citations

Jie Lv, Palas K. Chanda, Iris Owusu, Kaifu Chen, John P. Cooke +1 more

Machine learning uncovers cell identity regulator by histone code

Nature Communications(2020)10.1038/s41467-020-16539-4

N/A

0DataRank · unranked

49 citations

Dongyu Zhao, Guangyu Wang, Min Zhang, Jie Lv, Alin S. Tomoiaga +8 more

Broad genic repression domains signify enhanced silencing of oncogenes

Nature Communications(2020)10.1038/s41467-020-18913-8

N/A

0DataRank · unranked

24 citations

Lili Zhang, Min Zhang, Bo Xia, Jie Lv, Xinlei Gao +10 more

TADsplimer reveals splits and mergers of topologically associating domains for epigenetic regulation of transcription

Genome biology(2020)10.1186/s13059-020-01992-7

N/A

0DataRank · unranked

8 citations

Qingshu Meng, Bo Xia, Shuo Zhang, Jie Lv, Dongyu Zhao +7 more

MACMIC Reveals Dual Role of CTCF in Epigenetic Regulation of Cell Identity Genes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.12.247361

N/A

0DataRank · unranked

1 citations

Bo Xia, Man Zhou, Jie Lv, Dongyu Zhao, Yanqiang Li +8 more

On Our Doorstep, A Precious Cargo From MSCs

JACC Basic to Translational Science(2020)10.1016/j.jacbts.2020.10.002

N/A

0DataRank · unranked

0 citations

John P. Cooke

Association Between Chromosome 9p21 Variants and the Ankle-Brachial Index Identified by a Meta-Analysis of 21 Genome-Wide Association Studies

UNC Libraries(2020)10.17615/tb6e-th27

N/A

0DataRank · unranked

0 citations

Christina L. Wassel, Tanja Zeller, Lina Zgaga, Eric Boerwinkle, Ben A. Oostra +95 more

The Limitless Future of RNA Therapeutics

Frontiers in Bioengineering and Biotechnology(2021)10.3389/fbioe.2021.628137

N/A

0DataRank · unranked

544 citations

Roman Sukhovershin, Christian Boada, Francesca Taraballi, Roderic I. Pettigrew, John P. Cooke +1 more

Telomerase therapy reverses vascular senescence and extends lifespan in progeria mice

European Heart Journal(2021)10.1093/eurheartj/ehab547

N/A

0DataRank · unranked

95 citations

Brandon K. Walther, Chongming Jiang, Gianfranco Matrone, Rhonda Holgate, Qiu Xu +6 more