Paul Keim

Translational Genomics Research Institute

Also affiliated with Northern Arizona University

Biochemistry, Genetics and Molecular BiologyMedicineEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 29 papers. Top paper: “Using source-associated mobile genetic elements to identify zoonotic extraintestinal E. coli infections”.

Using source-associated mobile genetic elements to identify zoonotic extraintestinal E. coli infections

One Health(2023)10.1016/j.onehlt.2023.100518

N/A

0.604DataRank · unranked

55 citations

Maliha Aziz, Daniel E. Park, Zhenke Wu, Marc Stegger, Mengbing Li +17 more

Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico

PLOS Neglected Tropical Diseases(2019)10.1371/journal.pntd.0007727

N/A

0.587DataRank · unranked

49 citations

Sierra Jaramillo, Rebecca Jimenez, Nathan E. Stone, Heather Centner, Joseph D. Busch +12 more

Differential Thermotolerance Adaptation between Species of Coccidioides

Journal of Fungi(2020)10.3390/jof6040366

N/A

0.529DataRank · unranked

33 citations

Paris S. Hamm, Isaac Shaffer, Marcus de Melo Teixeira, Christopher S. Wendel, Nathan P. Wiederhold +10 more

Leptospira in river and soil in a highly endemic area of Ecuador

BMC Microbiology(2021)10.1186/s12866-020-02069-y

N/A

0.529DataRank · unranked

33 citations

Verónica Barragán, J. Chiriboga, Chad Allen Weddell, Ligia Luna, Dulce J. Jiménez +11 more

Defining the Pandemic at the State Level: Sequence-Based Epidemiology of the SARS-CoV-2 virus by the Arizona COVID-19 Genomics Union (ACGU)

medRxiv(2020)10.1101/2020.05.08.20095935

N/A

0.292DataRank · unranked

6 citations

Brendan B. Larsen, Jolene R. Bowers, Crystal M. Hepp, Evan Bolyen, Megan Folkerts +18 more

Differential thermotolerance adaptation between species of Coccidioides

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.12.247635

N/A

0.292DataRank · unranked

6 citations

Paris S. Hamm, Isaac Shaffer, Marcus de Melo Teixeira, Christopher S. Wendel, Nathan P. Wiederhold +10 more

Dual roles of a novel oncolytic viral vector-based SARS-CoV-2 vaccine: preventing COVID-19 and treating tumor progression

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.07.447286

N/A

0.269DataRank · unranked

5 citations

Wenjuan Dong, Lei Tian, Youliang Rao, Chao Qin, Sierra A. Jaramillo +15 more

Population sequencing for phylogenetic diversity and transmission analyses

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2424797122

N/A

0.180DataRank · unranked

2 citations

Tara Furstenau, Colin Wood, Vanessa Rigas, Kylie M. Drake, Jason W. Sahl +7 more

FXa cleaves the SARS-CoV-2 spike protein and blocks cell entry to protect against infection with inferior effects in B.1.1.7 variant

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.07.447437

N/A

0.165DataRank · unranked

2 citations

Jing Wang, Lei Tian, Jianying Zhang, Heather Mead, Sierra A. Jaramillo +9 more

Melioidosis in goats at a single Australian farm was caused by multiple diverse lineages of Burkholderia pseudomallei present in soil

PLoS neglected tropical diseases(2024)10.1371/journal.pntd.0012683

N/A

0.165DataRank · unranked

2 citations

Mirjam Kaestli, Mark Mayo, Chandler C. Roe, Adam J. Vazquez, Jodie Low Choy +11 more

Population sequencing for diversity and transmission analyses

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.18.599478

N/A

0.165DataRank · unranked

2 citations

Tara Furstenau, Colin Wood, Vanessa Rigas, Jason W. Sahl, Sara Maltinsky +6 more

NHP BurkPx: A multiplex serodiagnostic bead assay to monitor Burkholderia pseudomallei exposures in non-human primates

PLoS neglected tropical diseases(2023)10.1371/journal.pntd.0011067

N/A

0.104DataRank · unranked

1 citations

Austin B. Shannon, Derek L. Sonderegger, Jinhee Yi, Fernando P. Monroy, Christopher J. Allender +9 more

In vitro small molecule screening to inform novel candidates for use in fluconazole combination therapy in vivo against Coccidioides

Microbiology Spectrum(2024)10.1128/spectrum.01008-24

N/A

0DataRank · unranked

4 citations

Michael Valentine, Holly Yin, George R. Thompson, Paul Keim, David M. Engelthaler +2 more

Developing a Coccidioides posadasii and SARS-CoV-2 Co-infection Model in the K18-hACE2 Transgenic Mouse

Communications Medicine(2024)10.1038/s43856-024-00610-y

N/A

0DataRank · unranked

0 citations

Francisca J. Grill, Ashley N. Itogawa, Ana Fabio-Braga, Matthew M. Morales, Kelly M. Shepardson +10 more

Identification of Coccidioidomycosis Immunoreactive Peptides That Recall T-Cell Responses Indicating Past Exposure

The Journal of Infectious Diseases(2025)10.1093/infdis/jiaf118

N/A

0DataRank · unranked

4 citations

Mame Diarra Ndiaye, Erin Kelley, Maxx Harvey, Farhan Babur, Garrett Grischo +9 more

A multi-omics strategy to understand PASC through the RECOVER cohorts: a paradigm for a systems biology approach to the study of chronic conditions

Frontiers in Systems Biology(2025)10.3389/fsysb.2024.1422384

N/A

0DataRank · unranked

3 citations

Masanori Aikawa, Hassan Ashktorab, Noam D. Beckmann, Michael L. Enger, Joaquı́n M. Espinosa +18 more

An outer membrane vesicle vaccine prevents lung pathology in a macaque model of pneumonic melioidosis

Nature Communications(2025)10.1038/s41467-025-67213-6

N/A

0DataRank · unranked

0 citations

Erik W. Settles, Kimberly R. Celona, Austin B. Shannon, Christpher Davitt, Kalen Hall +18 more

Stenoparib, an inhibitor of cellular poly (ADP-ribose) polymerases (PARPs), blocks in vitro replication of SARS-CoV-2 variants

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.03.467186

N/A

0DataRank · unranked

0 citations

Sierra A. Jaramillo, Anthony R. Zapata, Nathan E. Stone, Ashley Jones, Haley E. Nunnally +8 more

Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity

F1000Research(2020)10.12688/f1000research.24751.2

N/A

0DataRank · unranked

16 citations

Matthew R. Dillon, Nicholas A. Bokulich, Jason T. Ladner, Brendan B. Larsen, Crystal M. Hepp +14 more

Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity

F1000Research(2020)10.12688/f1000research.24751.1

N/A

0DataRank · unranked

16 citations

Matthew R. Dillon, Nicholas A. Bokulich, Jason T. Ladner, Brendan B. Larsen, Crystal M. Hepp +13 more

Genomic characterization of Parengyodontium americanum sp. nov

Fungal Genetics and Biology(2020)10.1016/j.fgb.2020.103351

N/A

0DataRank · unranked

8 citations

Anna Muszewska, Jason Travis, Leandro F. Moreno, Sarah Ahmed, Chandler C. Roe +8 more

An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona

mBio(2020)10.1128/mbio.02107-20

N/A

0DataRank · unranked

33 citations

Brendan B. Larsen, Jolene R. Bowers, Crystal M. Hepp, Evan Bolyen, Megan Folkerts +18 more

Pathogen to commensal? Longitudinal within-host population dynamics, evolution, and adaptation during a chronic >16-year Burkholderia pseudomallei infection

PLoS Pathogens(2020)10.1371/journal.ppat.1008298

N/A

0DataRank · unranked

32 citations

Jason W. Sahl, Crystal M. Hepp, Karthik Handady, Heidie Hornstra, Adam J. Vazquez +17 more

Burkholderia pseudomallei OMVs derived from infection mimicking conditions elicit similar protection to a live-attenuated vaccine

npj Vaccines(2021)10.1038/s41541-021-00281-z

N/A

0DataRank · unranked

46 citations

Erik W. Settles, Christopher J.H. Davitt, Patrick Gellings, Nicole Kikendall, Joseph P. Hoffmann +9 more

No evidence for enzootic plague within black‐tailed prairie dog (Cynomys ludovicianus) populations

Integrative Zoology(2021)10.1111/1749-4877.12546

N/A

0DataRank · unranked

15 citations

R. Jory Brinkerhoff, Joseph D. Busch, Chris Ray, Adina Doyle, Jason W. Sahl +4 more

Burkholderia ubonensis Meropenem Resistance: Insights into Distinct Properties of Class A β-Lactamases in Burkholderia cepacia Complex and Burkholderia pseudomallei Complex Bacteria

mBio(2020)10.1128/mbio.00592-20

N/A

0DataRank · unranked

16 citations

Carina M. Hall, Jessica R. Webb, Jason W. Sahl, David M. Wagner, Paul Keim +3 more

Off-the-shelf CAR natural killer cells secreting IL-15 target spike in treating COVID-19

Nature Communications(2022)10.1038/s41467-022-30216-8

N/A

0DataRank · unranked

50 citations

Rui Ma, Wenjuan Dong, Kun‐Yu Teng, Daniel S. Kollath, Zhiyao Li +13 more

A chromosomal-level reference genome of the widely utilized Coccidioides posadasii laboratory strain “Silveira”

G3 Genes Genomes Genetics(2022)10.1093/g3journal/jkac031

N/A

0DataRank · unranked

23 citations

Jason Stajich, Jason W. Sahl, George R. Thompson, Rachel B. Brem, Claire Dubin +5 more

Factor Xa cleaves SARS-CoV-2 spike protein to block viral entry and infection

Nature Communications(2023)10.1038/s41467-023-37336-9

N/A

0DataRank · unranked

12 citations

Jing Wang, Lei Tian, Jianying Zhang, Erik W. Settles, Chao Qin +19 more