Joseph R. Nery

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

29.9Author DataRank

Indexed papers

13in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 13 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

Papers

Driven by 35 papers — median percentile 89. Top paper: “Expanded encyclopaedias of DNA elements in the human and mouse genomes”.

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

DNA methylation atlas of the mouse brain at single-cell resolution

Nature(2021)10.1038/s41586-020-03182-8

Top 5%

4.3DataRank

Top 5%310 citations

Jingtian Zhou, Wei Tian, Chongyuan Luo, Anna Bartlett, Andrew I. Aldridge +24 more

A multimodal cell census and atlas of the mammalian primary motor cortex

Nature(2021)10.1038/s41586-021-03950-0

Top 5%

4.3DataRank

Top 5%574 citations

BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Edward M. Callaway, Joseph R. Ecker, Z. Josh Huang, Ed S. Lein +252 more

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Nature(2021)10.1038/s41586-021-03500-8

Top 5%

4.2DataRank

Top 5%389 citations

Julie A. Harris, Fangming Xie, Stephan Fischer, Ricky S. Adkins, Andrew I. Aldridge +81 more

Spatiotemporal DNA methylome dynamics of the developing mouse fetus

Nature(2020)10.1038/s41586-020-2119-x

N/A

3.6DataRank · unranked

195 citations

Manoj Hariharan, David U. Gorkin, Diane E. Dickel, Chongyuan Luo, Rosa G. Castanon +15 more

Single-cell DNA methylation and 3D genome architecture in the human brain

Science(2023)10.1126/science.adf5357

Top 7%

3.1DataRank

Top 7%158 citations

Jingtian Zhou, Anna Bartlett, Qiurui Zeng, Hanqing Liu, Rosa G. Castanon +34 more

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.31.016972

N/A

2.4DataRank · unranked

90 citations

Nikolas L. Jorstad, Qiwen Hu, Blue B. Lake, Wei Tian, Brian E. Kalmbach +99 more

Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain

Nature(2023)10.1038/s41586-023-06805-y

Top 10%

2.1DataRank

Top 10%132 citations

Qiurui Zeng, Jingtian Zhou, Anna Bartlett, Bang-An Wang, Peter Berube +29 more

Conserved and divergent gene regulatory programs of the mammalian neocortex

Nature(2023)10.1038/s41586-023-06819-6

N/A

1.9DataRank · unranked

113 citations

Ethan J. Armand, Wenliang Wang, Seo Yeon Lee, Jingtian Zhou, Yang Eric Li +28 more

Single nucleus multi-omics regulatory landscape of the murine pituitary

Nature Communications(2021)10.1038/s41467-021-22859-w

Top 13%

1.6DataRank

Top 13%79 citations

Zidong Zhang, Michel Zamojski, Gregory R. Smith, Natalia Mendelev, Hanqing Liu +23 more

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.29.970558

Top 13%

1.6DataRank

Top 13%63 citations

Julie A. Harris, Fangming Xie, Stephan Fischer, A. Sina Booeshaghi, Ricky S. Adkins +78 more

Losing Dnmt3a dependent methylation in inhibitory neurons impairs neural function by a mechanism impacting Rett syndrome

eLife(2020)10.7554/elife.52981

N/A

1.4DataRank · unranked

58 citations

Kerstin Ure, Ying‐Wooi Wan, Chongyuan Luo, Alexander J. Trostle, Wei Wang +12 more

Brain-wide correspondence of neuronal epigenomics and distant projections

Nature(2023)10.1038/s41586-023-06823-w

Top 15%

1.4DataRank

Top 15%62 citations

Zhuzhu Zhang, May Wu, Hanqing Liu, Yan Pang, Anna Bartlett +46 more

Human DNA methylomes at base resolution show widespread epigenomic differences

Nature(2009)10.1038/nature08514

N/A

1.3DataRank · unranked

4754 citations

Mattia Pelizzola, Robert H. Dowen, R. David Hawkins, Gary Hon, Julian Tonti-Filippini +16 more

Comparative cellular analysis of motor cortex in human, marmoset and mouse

Nature(2021)10.1038/s41586-021-03465-8

N/A

1.0DataRank · unranked

818 citations

Nikolas L. Jorstad, Qiwen Hu, Blue B. Lake, Wei Tian, Brian E. Kalmbach +101 more

Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain

Cell Reports(2016)10.1016/j.celrep.2016.12.001

N/A

0.895DataRank · unranked

388 citations

Madeline A. Lancaster, Rosa Castanon, Joseph R. Nery, Juergen A. Knoblich, Joseph R. Ecker +1 more

Single nucleus multi-omics identifies human cortical cell regulatory genome diversity

Cell Genomics(2022)10.1016/j.xgen.2022.100107

N/A

0.765DataRank · unranked

163 citations

Hanqing Liu, Fangming Xie, Ethan J. Armand, Kimberly Siletti, Trygve E. Bakken +28 more

Drought recovery in plants triggers a cell-state-specific immune activation

Nature Communications(2025)10.1038/s41467-025-63467-2

N/A

0.505DataRank · unranked

28 citations

Jingting Yu, Joseph Swift, Kathryn Lande, Bruce Jow, Lia Partida-Garcia +13 more

Epigenomic complexity of the human brain revealed by single-cell DNA methylomes and 3D genome structures

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.30.518285

Top 41%

0.468DataRank

Top 41%10 citations

Jingtian Zhou, Anna Bartlett, Qiurui Zeng, Hanqing Liu, Rosa G. Castanon +33 more

Iterative Refinement of Cellular Identity from Single-Cell Data Using Online Learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.16.909861

N/A

0.345DataRank · unranked

9 citations

Sebastian Preissl, Chongyuan Luo, Rosa G. Castanon, Justin P. Sandoval, Angeline C. Rivkin +6 more

Epigenome erosion in Alzheimer’s disease brain cells and induced neurons

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.15.562394

N/A

0.330DataRank · unranked

8 citations

Jeffrey R. Jones, Jingtian Zhou, Wei Tian, Yue Wu, Wenliang Wang +19 more

Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse

Nature(2022)10.1038/s41586-022-04562-y

N/A

0.317DataRank · unranked

5 citations

Nikolas L. Jorstad, Qiwen Hu, Blue B. Lake, Wei Tian, Brian E. Kalmbach +104 more

Genetics and environment distinctively shape the human immune cell epigenome

Nature Genetics(2026)10.1038/s41588-025-02479-6

N/A

0.216DataRank · unranked

3 citations

Manoj Hariharan, Wubin Ding, Anna Bartlett, Cesar Barragan, Rosa G. Castanon +40 more

Single nucleus multi-omics regulatory atlas of the murine pituitary

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.06.138024

Top 65%

0.208DataRank

Top 65%3 citations

Zidong Zhang, Michel Zamojski, Gregory R. Smith, Natalia Mendelev, Hanqing Liu +23 more

Cell-type-specific transposable element demethylation and TAD remodeling in the aging mouse brain

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.21.648266

Top 72%

0.110DataRank

Top 72%1 citations

Wei Tian, Amit Klein, Anna Bartlett, Hanqing Liu, Joseph R. Nery +28 more

Leaf cell-specific and single-cell transcriptional profiling reveals a role for the palisade layer in UV light protection

The Plant Cell(2022)10.1093/plcell/koac167

N/A

0DataRank · unranked

99 citations

Travis Lee, Aleca M. Borsuk, Bastiaan O. R. Bargmann, Tsegaye Dabi, Joseph R. Nery +7 more

Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes

Cell Genomics(2023)10.1016/j.xgen.2023.100342

N/A

0DataRank · unranked

22 citations

Ethan J. Armand, Zizhen Yao, Hanqing Liu, Anna Bartlett, M. Margarita Behrens +14 more

Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.25.465795

N/A

0DataRank · unranked

2 citations

Ethan J. Armand, Zizhen Yao, Hanqing Liu, Anna Bartlett, M. Margarita Behrens +14 more

Genetics and Environment Distinctively Shape the Human Immune Cell Epigenome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.29.546792

N/A

0DataRank · unranked

5 citations

Manoj Hariharan, Wubin Ding, Anna Bartlett, Cesar Barragan, Rosa G. Castanon +39 more

Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate neocortex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.08.536119

N/A

0DataRank · unranked

4 citations

Ethan J. Armand, Wenliang Wang, Seo Yeon Lee, Jingtian Zhou, Yang Eric Li +23 more

Brain-wide Correspondence Between Neuronal Epigenomics and Long-Distance Projections

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.01.538832

N/A

0DataRank · unranked

0 citations

Zhuzhu Zhang, May Wu, Hanqing Liu, Yan Pang, Anna Bartlett +43 more

Epigenomic diversity of cortical projection neurons in the mouse brain

Nature(2021)10.1038/s41586-021-03223-w

N/A

0DataRank · unranked

76 citations

Jingtian Zhou, Pengcheng Tan, Yan Pang, Angeline C. Rivkin, Megan A. Kirchgessner +27 more

Maternal Immune Activation Disrupts Epigenomic and Functional Maturation of Cortical Excitatory Neurons

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.28.651094

N/A

0DataRank · unranked

0 citations

Jessica Arzavala, Adoni Duarte, Shiyuan Wang, Junhao Li, Hanqing Liu +8 more

PHYTOCHROME-INTERACTING FACTORs trigger environmentally responsive chromatin dynamics in plants

Nature Genetics(2021)10.1038/s41588-021-00882-3

N/A

0DataRank · unranked

124 citations

Mark Zander, Chan Yul Yoo, Amy Phan, Renee M. Garza, Shelly A. Wanamaker +7 more

Epigenomic Diversity of Cortical Projection Neurons in the Mouse Brain

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.01.019612

N/A

0DataRank · unranked

16 citations

Jingtian Zhou, Pengcheng Tan, Yan Pang, Angeline C. Rivkin, Megan A. Kirchgessner +26 more

Joseph R. Nery

Indexed papers

Top data-sharing exemplar

Papers