Chang Ye

Also affiliated with Howard Hughes Medical Institute, State Grid Corporation of China (China), University of Chicago

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “YTHDF2/m6A/NF‐κB axis controls anti‐tumor immunity by regulating intratumoral Tregs”.

YTHDF2/m6A/NF‐κB axis controls anti‐tumor immunity by regulating intratumoral Tregs

The EMBO Journal(2023)10.15252/embj.2022113126

N/A

1.3DataRank · unranked

61 citations

Xiaoyang Dou, Zhong Zheng, Chang Ye, Thomas X. Lu, Hua Liang +4 more

BID-seq for transcriptome-wide quantitative sequencing of mRNA pseudouridine at base resolution

Nature Protocols(2023)10.1038/s41596-023-00917-5

N/A

0.956DataRank · unranked

39 citations

Chang Ye, Cheng‐Wei Ju, Boyang Gao, Xinran Feng, Hui‐Lung Sun +5 more

RBFOX2 recognizes N6-methyladenosine to suppress transcription and block myeloid leukaemia differentiation

Nature Cell Biology(2023)10.1038/s41556-023-01213-w

N/A

0.675DataRank · unranked

89 citations

Yu Xiao, Chao Shen, Kitty Wang, Tong Wu, Chang Liu +14 more

Chemical Proteomic Discovery of Isotype‐Selective Covalent Inhibitors of the RNA Methyltransferase NSUN2

Angewandte Chemie International Edition(2023)10.1002/anie.202311924

N/A

0.612DataRank · unranked

58 citations

Jan G. Felber, Zhongyu Zou, Evert Njomen, Jarrett R. Remsberg, Daisuke Ogasawara +7 more

Nm-Mut-seq: a base-resolution quantitative method for mapping transcriptome-wide 2′-O-methylation

Cell Research(2023)10.1038/s41422-023-00836-w

N/A

0.553DataRank · unranked

39 citations

Lisheng Zhang, Chang Ye, Huiqing Zhou, Bei Liu, Boyang Gao +5 more

PTPN2 copper-sensing relays copper level fluctuations into EGFR/CREB activation and associated CTR1 transcriptional repression

Nature Communications(2024)10.1038/s41467-024-50524-5

N/A

0.440DataRank · unranked

13 citations

Yuan Xie, Ryan C. Owyang, Chang Ye, Olivia N. P. Zbihley, Ruitu Lyu +7 more

Chemical manipulation of m1A mediates its detection in human tRNA

RNA(2024)10.1261/rna.079966.124

N/A

0.425DataRank · unranked

16 citations

Ruitu Lyu, Xiaoyang Dou, Chang Ye, Li-Sheng Zhang, Qing Dai +2 more

Pseudouridine Detection and Quantification Using Bisulfite Incorporation Hindered Ligation

ACS Chemical Biology(2024)10.1021/acschembio.4c00387

N/A

0.360DataRank · unranked

10 citations

Xinyuan Ma, Chang Ye, Wenlong Li, Kinga Pajdzik, Qing Dai +3 more

Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq

Nature Communications(2024)10.1038/s41467-024-50680-8

N/A

0.332DataRank · unranked

5 citations

Yun Gao, Tong Wu, Chang Ye, Pingluan Wang, Chuan He +1 more

Analysis of genome-wide 5-hydroxymethylation of blood samples stored in different anticoagulants: opportunities for the expansion of clinical resources for epigenetic research

Epigenetics(2023)10.1080/15592294.2023.2271692

N/A

0.208DataRank · unranked

3 citations

Zhou Zhang, Xiaolong Cui, Diana C. West-Szymanski, Chang Ye, Chuan He +3 more

Ultra-mild bisulfite outperforms existing methods for 5-methylcytosine detection with low input DNA

Nature Communications(2025)10.1038/s41467-025-66033-y

N/A

0DataRank · unranked

5 citations

Tanner Baldwin, Ruitu Lyu, Bryan C. Daniels, Chang Ye, Chen Cao +7 more

Quantitative CRACI reveals transcriptome-wide distribution of RNA dihydrouridine at base resolution

Nature Communications(2025)10.1038/s41467-025-63918-w

N/A

0DataRank · unranked

3 citations

Han Li, Bochen Jiang, Xuanhao Zhu, Cui Liang, Zhanghui Han +17 more

Pseudouridylation of 7SK by PUS7 regulates Pol II transcription elongation

Nature Communications(2025)10.1038/s41467-025-64668-5

N/A

0DataRank · unranked

2 citations

Hui‐Lung Sun, Wenlong Li, Chang Ye, Xiaoyang Dou, Yong Peng +9 more

Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution

Nature Biotechnology(2022)10.1038/s41587-022-01505-w

N/A

0DataRank · unranked

246 citations

Lisheng Zhang, Hui‐Lung Sun, Kinga Pajdzik, Lei Yang, Chang Ye +13 more

Ultra-mild bisulfite outperforms existing methods for 5-methylcytosine detection with low input DNA

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.09.681456

N/A

0DataRank · unranked

0 citations

Tanner Baldwin, Ruitu Lyu, Bryan C. Daniels, Chang Ye, Chen Cao +7 more

m6A-SAC-seq for quantitative whole transcriptome m6A profiling

Nature Protocols(2022)10.1038/s41596-022-00765-9

N/A

0DataRank · unranked

72 citations

Chang Ye, Yong Peng, Qing Dai, Yutao Zhao, Shun Liu +4 more

PTPN2 copper-sensing rapidly relays copper level fluctuations into EGFR/CREB activation and associated CTR1 transcriptional repression

Olivo & olio(2023)10.1101/2023.08.29.555401

N/A

0DataRank · unranked

0 citations

Yuan Xie, Ryan C. Owyang, Chang Ye, Olivia N. P. Zbihley, Ruitu Lyu +7 more

Chemical Proteomic Discovery of Isotype‐Selective Covalent Inhibitors of the RNA Methyltransferase NSUN2

Angewandte Chemie(2023)10.1002/ange.202311924

N/A

0DataRank · unranked

0 citations

Jan G. Felber, Zhongyu Zou, Evert Njomen, Jarrett R. Remsberg, Daisuke Ogasawara +7 more

Ultrafast bisulfite sequencing detection of 5-methylcytosine in DNA and RNA

Nature Biotechnology(2024)10.1038/s41587-023-02034-w

N/A

0DataRank · unranked

147 citations

Chang Ye, Iryna Irkliyenko, Yiding Wang, Hui‐Lung Sun, Yun Gao +6 more

Small-molecule inhibition of the METTL3/METTL14 complex suppresses neuroblastoma tumor growth and promotes differentiation

Cell Reports(2024)10.1016/j.celrep.2024.114165

N/A

0DataRank · unranked

39 citations

Mohansrinivas Chennakesavalu, Pingluan Wang, Zhiwei Jiang, Hui‐Lung Sun, Peizhe Ren +16 more

Profiling of RNA-binding protein binding sites by in situ reverse transcription-based sequencing

Nature Methods(2024)10.1038/s41592-023-02146-w

N/A

0DataRank · unranked

38 citations

Yan-Ming Chen, Zhongyu Zou, Chang Ye, Xiaoyang Dou, Jinjun Wu +10 more

Sequencing of N6-methyl-deoxyadenosine at single-base resolution across the mammalian genome

Molecular Cell(2024)10.1016/j.molcel.2023.12.021

N/A

0DataRank · unranked

19 citations

Xiaolong Cui, Li-Sheng Zhang, Chang Ye, Pingluan Wang, Yuhao Zhong +4 more

Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.29.582869

N/A

0DataRank · unranked

1 citations

Yun Gao, Tong Wu, Chang Ye, Pingluan Wang, Chuan He +1 more

WITHDRAWN: Detection of N3-methylcytidine in RNA at single base resolution using Protoscript II to read through and generate high mutation rates

Bioorganic & Medicinal Chemistry(2024)10.1016/j.bmc.2024.117905

N/A

0DataRank · unranked

0 citations

Kinga Pajdzik, Xiaoyang Dou, Hui‐Lung Sun, Chang Ye, Li-Sheng Zhang +3 more