James E. Kirby

Also affiliated with Harvard University, Hadassah Medical Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 27 papers. Top paper: “Female mice lacking Xist RNA show partial dosage compensation and survive to term”.

Female mice lacking Xist RNA show partial dosage compensation and survive to term

Genes & Development(2016)10.1101/gad.281162.116

N/A

0.677DataRank · unranked

90 citations

James E. Kirby, Hongjae Sunwoo, Jeannie T. Lee, Lin Yang

Large-Scale, In-House Production of Viral Transport Media To Support SARS-CoV-2 PCR Testing in a Multihospital Health Care Network during the COVID-19 Pandemic

Journal of Clinical Microbiology(2020)10.1128/jcm.00913-20

N/A

0.574DataRank · unranked

45 citations

Annie Cheng, Amber Chopelas, Sarah DuBois-Coyne, Ikram Mezghani, Shade Rodriguez +3 more

Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance

Genome Medicine(2022)10.1186/s13073-022-01040-y

N/A

0.571DataRank · unranked

44 citations

Abigail L. Manson, Bruce J. Walker, Thea Brennan-Krohn, Colin J. Worby, Peijun Ma +25 more

Novel strain of multidrug non-susceptible Neisseria gonorrhoeae in the USA

The Lancet Infectious Diseases(2024)10.1016/s1473-3099(23)00785-5

N/A

0.505DataRank · unranked

28 citations

Cau D. Pham, Sandeep J. Joseph, Shelby M. Hutton, John C. Cartee, Yuheng Ruan +10 more

Testing for SARS-CoV-2: lessons learned and current use cases

Clinical Microbiology Reviews(2024)10.1128/cmr.00072-23

N/A

0.442DataRank · unranked

18 citations

James E. Kirby, Nira R. Pollock, Elitza S. Theel

Cryo-EM structure of the Pseudomonas aeruginosa MexY multidrug efflux pump

mBio(2025)10.1128/mbio.03826-24

N/A

0.327DataRank · unranked

7 citations

Rakesh Maharjan, Zhemin Zhang, Lucius Chiaraviglio, Nithya Sastry, Meng Cui +3 more

Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.08.471225

N/A

0.165DataRank · unranked

2 citations

Abigail L. Manson, Bruce J. Walker, Thea Brennan-Krohn, Colin J. Worby, Peijun Ma +27 more

Microwave-Generated Steam Decontamination of N95 Respirators Utilizing Universally Accessible Materials

medRxiv(2020)10.1101/2020.04.22.20076117

N/A

0DataRank · unranked

11 citations

Alex B. Green, Alex N Nguyen Ba, Tanush Jagdish, Dvir Reif, Robert D. Seeley +3 more

Large-scale, in-house production of viral transport media to support SARS-CoV-2 PCR testing in a multi-hospital healthcare network during the COVID-19 pandemic

medRxiv(2020)10.1101/2020.04.29.20085514

N/A

0DataRank · unranked

6 citations

Annie Cheng, Amber Chopelas, Sarah DuBois-Coyne, Ikram Mezghani, Shade Rodriguez +3 more

Viral load and disease severity in COVID-19

Internal and Emergency Medicine(2021)10.1007/s11739-021-02786-w

N/A

0DataRank · unranked

21 citations

Lakshman Balaji, Shivani Mehta, Andrew Cole, Xiaowen Liu, Natia Peradze +9 more

Profiling the in vitro and in vivo activity of streptothricin-F against carbapenem-resistant Enterobacterales: a historic scaffold with a novel mechanism of action

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.14.448463

N/A

0DataRank · unranked

4 citations

Yoon‐Suk Kang, Alex B. Green, Matthew G. Dowgiallo, Brandon C. Miller, Lucius Chiaraviglio +6 more

The Limit of Detection Matters: The Case for Benchmarking Severe Acute Respiratory Syndrome Coronavirus 2 Testing

Clinical Infectious Diseases(2020)10.1093/cid/ciaa1382

N/A

0DataRank · unranked

141 citations

Rose Lee, Ghee Rye Lee, Cody Callahan, Annie Cheng, Christina Yen +4 more

The convergent total synthesis and antibacterial profile of the natural product streptothricin F

Chemical Science(2022)10.1039/d1sc06445b

N/A

0DataRank · unranked

16 citations

Brandon C. Miller, Mintesinot Kassu, Kenneth P. Smith, Andrew D. Fetigan, Jason J. Guo +3 more

A Versatile Nanoluciferase Reporter Reveals Structural Properties Associated With a Highly Efficient, N-Terminal Legionella pneumophila type IV Secretion Translocation Signal

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.25.493526

N/A

0DataRank · unranked

0 citations

James E. Kirby, Yoon‐Suk Kang

Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome

PLoS Biology(2023)10.1371/journal.pbio.3002091

N/A

0DataRank · unranked

37 citations

Yoon‐Suk Kang, Alex B. Green, Kenneth P. Smith, Matthew G. Dowgiallo, Brandon C. Miller +9 more

RND Pump-Mediated Efflux of Amotosalen, a Compound Used in Pathogen Inactivation Technology to Enhance Safety of Blood Transfusion Products, May Compromise Its Gram-Negative Anti-Bacterial Activity

mSphere(2023)10.1128/msphere.00673-22

N/A

0DataRank · unranked

10 citations

Lucius Chiaraviglio, Katherine A. Truelson, Katelyn E. Zulauf, Meng Cui, Zhemin Zhang +6 more

A Versatile Nanoluciferase Reporter Reveals Structural Properties Associated with a Highly Efficient, N-Terminal Legionella pneumophila Type IV Secretion Translocation Signal

Microbiology Spectrum(2023)10.1128/spectrum.02338-22

N/A

0DataRank · unranked

3 citations

James E. Kirby, Yoon‐Suk Kang

Development of CGS-15943 Adjunctives for the Disruption of Plasmid Maintenance in Multidrug Resistant E. coli

ACS Infectious Diseases(2024)10.1021/acsinfecdis.4c00587

N/A

0DataRank · unranked

2 citations

Katelyn E. Zulauf, Jessica Ross, James E. Kirby, Roman Manetsch, Mintesinot Kassu

Exploration of the Fusidic Acid Structure Activity Space for Antibiotic Activity

Molecules(2025)10.3390/molecules30030465

N/A

0DataRank · unranked

0 citations

Simone Cavalcante Silva, Kenneth Smith, Krissty Sumida, Yuhan Wang, Lucius Chiaraviglio +5 more

De Novo Design and Asymmetric Synthesis of a C-1/2 Benzodioxin Fused Glycoside Analogue of Lincomycin

Organic Letters(2025)10.1021/acs.orglett.5c03402

N/A

0DataRank · unranked

0 citations

Ryan Moradei, Lucius Chiaraviglio, Alhanouf Z. Aljahdali, Ramachandra Reddy Donthiri, James E. Kirby +2 more

Amotosalen is a bacterial multidrug efflux pump substrate potentially affecting its pathogen inactivation activity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435562

N/A

0DataRank · unranked

0 citations

Katelyn E. Zulauf, Katherine A. Truelson, Lucius Chiaraviglio, Meng Cui, Zhemin Zhang +6 more

Image analysis and artificial intelligence in infectious disease diagnostics

Clinical Microbiology and Infection(2020)10.1016/j.cmi.2020.03.012

N/A

0DataRank · unranked

109 citations

James E. Kirby, Kenny Smith

Microwave-Generated Steam Decontamination of N95 Respirators Utilizing Universally Accessible Materials

mBio(2020)10.1128/mbio.00997-20

N/A

0DataRank · unranked

72 citations

Alex B. Green, Alex N Nguyen Ba, Tanush Jagdish, Dvir Reif, Robert D. Seeley +3 more

New strategies and structural considerations in development of therapeutics for carbapenem-resistant Enterobacteriaceae

Translational research(2020)10.1016/j.trsl.2020.02.008

N/A

0DataRank · unranked

30 citations

Roman Manetsch, George A. O’Doherty, James E. Kirby, Thea Brennan-Krohn

SARS-CoV2 Testing: The Limit of Detection Matters

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.02.131144

N/A

0DataRank · unranked

169 citations

Rose Lee, Ghee Rye Lee, Cody Callahan, Christina Yen, Kenneth P. Smith +3 more

Nasal-Swab Testing Misses Patients with Low SARS-CoV-2 Viral Loads

medRxiv(2020)10.1101/2020.06.12.20128736

N/A

0DataRank · unranked

38 citations

Rose Lee, Ghee Rye Lee, Kate Zulauf, James E. Kirby, Ramy Arnaout +1 more

Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck

medRxiv(2020)10.1101/2020.04.14.20065094

N/A

0DataRank · unranked

36 citations

Rose Lee, Katelyn E. Zulauf, Lauren Tamburello, Kenneth P. Smith, Joe Previtera +8 more