Gérémy Clair

Also affiliated with Environmental Molecular Sciences Laboratory

Physics and AstronomyEnvironmental ScienceEarth and Planetary Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 28 papers. Top paper: “Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)”.

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

Nature Cell Biology(2023)10.1038/s41556-023-01194-w

N/A

2.3DataRank · unranked

175 citations

Liming Pei, Jeffrey M. Spraggins, Michael Angelo, James P. Carson, Nils Gehlenborg +95 more

Viral afterlife: SARS-CoV-2 as a reservoir of immunomimetic peptides that reassemble into proinflammatory supramolecular complexes

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2300644120

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1.1DataRank · unranked

33 citations

Vanthana Bharathi, Tatsuya Dokoshi, Jaime de Anda, Lauryn Ursery, Nikhil N Kulkarni +30 more

An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.1022775

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0.501DataRank · unranked

10 citations

Olson, Heather M., Marija Veličković, Juan Wang, Jennifer Kyle, Young‐Mo Kim +15 more

A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases

Nature Biomedical Engineering(2025)10.1038/s41551-025-01423-7

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0.457DataRank · unranked

20 citations

Jonas C. Schupp, Taylor Adams, Gérémy Clair, A. Justet, Farida Ahangari +17 more

O-GlcNAc transferase regulates collagen deposition and fibrosis resolution in idiopathic pulmonary fibrosis

Frontiers in Immunology(2024)10.3389/fimmu.2024.1387197

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0.442DataRank · unranked

18 citations

E. Scott Helton, Yiming Guo, Bailey Burpee, Elex Rose, Molly Easter +15 more

Rat bronchoalveolar lavage proteome changes following e-cigarette aerosol exposures

American Journal of Physiology-Lung Cellular and Molecular Physiology(2023)10.1152/ajplung.00016.2023

N/A

0.348DataRank · unranked

8 citations

Juan Wang, Carl J. Johnston, So-Young Kim, Olson, Heather M., Emma L. House +5 more

Robust, sensitive, and quantitative single-cell proteomics based on ion mobility filtering

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.30.428333

N/A

0.208DataRank · unranked

3 citations

Gérémy Clair, Sarah Williams, Song Feng, Chia‐Feng Tsai, Ronald Moore +7 more

Three-dimensional feature matching improves coverage for single-cell proteomics based on ion mobility filtering

Cell Systems(2022)10.1016/j.cels.2022.02.003

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0DataRank · unranked

93 citations

Gérémy Clair, Sarah Williams, Song Feng, Chia‐Feng Tsai, Ronald Moore +7 more

The Missing Pieces: The Role of Secretion Systems in Campylobacter jejuni Virulence

Biomolecules(2023)10.3390/biom13010135

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0DataRank · unranked

45 citations

Jennifer L. Mydosh, Prabhat K. Talukdar, Lisa M. Gloss, Jason McDermott, Kerry K. Cooper +3 more

Evaluating Linear Ion Trap for MS3-Based Multiplexed Single-Cell Proteomics

Analytical Chemistry(2023)10.1021/acs.analchem.2c03739

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0DataRank · unranked

25 citations

Fengchao Yu, James Fulcher, Sarah Williams, Kristin Engbrecht, Ronald Moore +5 more

Influence of the irradiated pulmonary microenvironment on macrophage and T cell dynamics

Radiotherapy and Oncology(2023)10.1016/j.radonc.2023.109543

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0DataRank · unranked

15 citations

Ravi Misra, Gérémy Clair, Eric Hernady, Olson, Heather M., Danny Orton +4 more

Chymotrypsin-like Elastase-1 Mediates Progressive Emphysema in Alpha-1 Antitrypsin Deficiency

Chronic Obstructive Pulmonary Diseases Journal of the COPD Foundation(2023)10.15326/jcopdf.2023.0416

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0DataRank · unranked

7 citations

Noah J. Smith, Rashika Joshi, Qiang Fan, Michael T. Borchers, Gérémy Clair +3 more

CELA1 Mediates Progressive Emphysema in Alpha-1 Antitrypsin Deficiency

Research Square(2023)10.21203/rs.3.rs-2617812/v1

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0DataRank · unranked

1 citations

Noah J. Smith, Rashika Joshi, Qiang Fan, Michael T. Borchers, Gérémy Clair +3 more

Analysis of a macrophage carbamylated proteome reveals a function in post-translational modification crosstalk

Research Square(2023)10.21203/rs.3.rs-3044777/v1

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0DataRank · unranked

0 citations

Chia‐Feng Tsai, Rishi Patel, Soumyadeep Sarkar, Gérémy Clair, Mowei Zhou +5 more

The spatially resolved transcriptome signatures of glomeruli in chronic kidney disease

JCI Insight(2024)10.1172/jci.insight.165515

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0DataRank · unranked

16 citations

Hasmik Soloyan, Paolo Cravedi, Andrea Angeletti, Fadi Salem, Laith Al‐Rabadi +6 more

EMC3 regulates trafficking and pulmonary toxicity of the SFTPCI73T mutation associated with interstitial lung disease

Journal of Clinical Investigation(2024)10.1172/jci173861

N/A

0DataRank · unranked

3 citations

Wei Wei, Yuqing Sun, Timothy E. Weaver, Ernesto Nakayasu, Gérémy Clair +12 more

Alterations of the skeletal muscle nuclear proteome after acute exercise reveals a post-transcriptional influence.

American Journal of Physiology-Cell Physiology(2025)10.1152/ajpcell.00575.2024

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0DataRank · unranked

1 citations

Xiping Zhang, Mark Viggars, James Sanford, Zane W. Taylor, Joshua Hansen +6 more

Sexually distinct multi-omic responses to progressive endurance exercise training in the rat lung

American Journal of Respiratory Cell and Molecular Biology(2025)10.1165/rcmb.2025-0249oc

N/A

0DataRank · unranked

1 citations

Tyler J. Sagendorf, Hugh Mitchell, James Sanford, Samuel M. Cohen, Ravi Misra +77 more

A multimodal imaging approach for imaging the metabolic changes resulting from bronchopulmonary dysplasia

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.16.660017

N/A

0DataRank · unranked

2 citations

Zhi Li, Gail Deutsch, Heidi L. Huyck, Niana Beishembieva, Olson, Heather M. +7 more

Metabolites, Lipids, Protein extraction protocol (MPLEx) v1

(2025)10.17504/protocols.io.36wgqd15ovk5/v1

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0DataRank · unranked

0 citations

Gérémy Clair, Ernesto Nakayasu, Weijun Qian, Heather E. Olson

Amylases in the Human Vagina

mSphere(2020)10.1128/msphere.00943-20

N/A

0DataRank · unranked

51 citations

Gérémy Clair, Joshua Adkins, Kristin Engbrecht, Thomas Fillmore, Larry J. Forney +1 more

The congenital APOA1 K107del mutation disrupts the lipid-free conformation of monomeric APOA1 and impairs oligomerization

Journal of Lipid Research(2025)10.1016/j.jlr.2025.100929

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0DataRank · unranked

0 citations

Marina González, Horacio A. Garda, Romina F. Vázquez, Sabina María Maté, M. Alejandra Tricerri +9 more

A porcine ligated loop model reveals new insight into the host immune response againstCampylobacter jejuni

Gut Microbes(2020)10.1080/19490976.2020.1814121

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0DataRank · unranked

15 citations

Yinyin Ye, Laís M Malavasi, Swechha M. Pokharel, Steven Huynh, Susan M. Noh +10 more

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

Nature Communications(2021)10.1038/s41467-021-26514-2

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0DataRank · unranked

197 citations

Sarah Williams, Lye Meng Markillie, Song Feng, Chia‐Feng Tsai, Victor Aguilera-Vazquez +12 more

The Campylobacter jejuni CiaD effector co-opts the host cell protein IQGAP1 to promote cell entry

Nature Communications(2021)10.1038/s41467-021-21579-5

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0DataRank · unranked

23 citations

Christopher R. Gourley, Prabhat K. Talukdar, Gérémy Clair, Courtney M. Klappenbach, Cody J. Lauritsen +3 more

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.17.431689

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0DataRank · unranked

28 citations

Sarah Williams, Victor Aguilera-Vazquez, Ryan Sontag, Ronald Moore, Lye Meng Markillie +8 more

Author Correction: High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

Nature Communications(2021)10.1038/s41467-021-27110-0

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0DataRank · unranked

10 citations

Sarah Williams, Lye Meng Markillie, Song Feng, Chia‐Feng Tsai, Victor Aguilera-Vazquez +12 more

A microphysiological model of human trophoblast invasion during implantation

Nature Communications(2022)10.1038/s41467-022-28663-4

N/A

0DataRank · unranked

110 citations

Sneha Mani, Gérémy Clair, Olson, Heather M., Vanessa Paurus, Charles Ansong +8 more