🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Farhan Quadir

University of Missouri

ORCID: 0000-0003-0480-5714
Biochemistry, Genetics and Molecular BiologyMaterials ScienceComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
4.8Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment

Proteins Structure Function and Bioinformatics(2021)10.1002/prot.26222
Top 9%
2.3DataRank
Top 9%127 citations

Guillaume Brysbaert, Théo Mauri, Nurul Nadzirin, Sameer Velankar, Raphaël A. G. Chaleil +95 more

Papers

Driven by 17 papers — median percentile 89. Top paper: “Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment”.

Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment

Proteins Structure Function and Bioinformatics(2021)10.1002/prot.26222
Top 9%
2.3DataRank
Top 9%127 citations

Guillaume Brysbaert, Théo Mauri, Nurul Nadzirin, Sameer Velankar, Raphaël A. G. Chaleil +95 more

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26609
Top 11%
1.9DataRank
Top 11%81 citations

Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato +95 more

A deep dilated convolutional residual network for predicting interchain contacts of protein homodimers

Bioinformatics(2022)10.1093/bioinformatics/btac063
N/A
0.596DataRank · unranked
52 citations

Farhan Quadir, Elham Soltanikazemi, Jianlin Cheng, Raj S. Roy

Impact of AlphaFold on Structure Prediction of Protein Complexes: The CASP15-CAPRI Experiment

Utrecht University Repository (Utrecht University)(2023)10.22541/au.168888815.53957253/v1
Top 36%
0.540DataRank
Top 36%17 citations

Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato +95 more

Multi-head attention-based U-Nets for predicting protein domain boundaries using 1D sequence features and 2D distance maps

BMC Bioinformatics(2022)10.1186/s12859-022-04829-1
N/A
0.345DataRank · unranked
9 citations

Zhiye Guo, Farhan Quadir, Jian Liu, Jianlin Cheng, Sajid Mahmud

A deep dilated convolutional residual network for predicting interchain contacts of protein homodimers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.19.460941
N/A
0.292DataRank · unranked
6 citations

Farhan Quadir, Elham Soltanikazemi, Jianlin Cheng, Raj S. Roy

DNCON2_Inter: Predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learning

Research Square(2021)10.21203/rs.3.rs-228041/v1
N/A
0DataRank · unranked
2 citations

Raj S. Roy, Randal Halfmann, Jianlin Cheng, Farhan Quadir

Multi-Head Attention-based U-Nets for Predicting Protein Domain Boundaries Using 1D Sequence Features and 2D Distance Maps

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.08.487689
N/A
0DataRank · unranked
1 citations

Zhiye Guo, Farhan Quadir, Jian Liu, Jianlin Cheng, Sajid Mahmud

Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15

Communications Biology(2023)10.1038/s42003-023-05525-3
N/A
0DataRank · unranked
76 citations

Zhiye Guo, Tianqi Wu, Raj S. Roy, Farhan Quadir, Chen Chen +2 more

Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.16.541055
N/A
0DataRank · unranked
16 citations

Zhiye Guo, Tianqi Wu, Raj S. Roy, Farhan Quadir, Chen Chen +2 more

Predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.09.373878
N/A
0DataRank · unranked
7 citations

Raj S. Roy, Randal Halfmann, Jianlin Cheng, Farhan Quadir

Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15

Research Square(2023)10.21203/rs.3.rs-2963209/v1
N/A
0DataRank · unranked
3 citations

Zhiye Guo, Tianqi Wu, Raj S. Roy, Farhan Quadir, Chen Chen +2 more

DNCON2_Inter: predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learning

Scientific Reports(2021)10.1038/s41598-021-91827-7
N/A
0DataRank · unranked
27 citations

Raj S. Roy, Randal Halfmann, Jianlin Cheng, Farhan Quadir

DeepComplex: A Web Server of Predicting Protein Complex Structures by Deep Learning Inter-chain Contact Prediction and Distance-Based Modelling

Frontiers in Molecular Biosciences(2021)10.3389/fmolb.2021.716973
N/A
0DataRank · unranked
25 citations

Raj S. Roy, Elham Soltanikazemi, Jianlin Cheng, Farhan Quadir

Distance‐based reconstruction of protein quaternary structures from inter‐chain contacts

Proteins Structure Function and Bioinformatics(2021)10.1002/prot.26269
N/A
0DataRank · unranked
13 citations

Farhan Quadir, Raj S. Roy, Zhiye Guo, Jianlin Cheng, Elham Soltanikazemi

High-Performance Deep Learning Toolbox for Genome-Scale Prediction of Protein Structure and Function

PubMed(2021)10.1109/mlhpc54614.2021.00010
N/A
0DataRank · unranked
13 citations

Peik K. Lund-Andersen, Alex Morehead, Sajid Mahmud, Chen Chen, Xiao Chen +12 more

Distance-based Reconstruction of Protein Quaternary Structures from Inter-Chain Contacts

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.24.445503
N/A
0DataRank · unranked
3 citations

Farhan Quadir, Raj S. Roy, Jianlin Cheng, Elham Soltanikazemi