Thomas W. Burke

Also affiliated with Duke Medical Center

Medicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 34 papers. Top paper: “Dysregulated transcriptional responses to SARS-CoV-2 in the periphery”.

Dysregulated transcriptional responses to SARS-CoV-2 in the periphery

Nature Communications(2021)10.1038/s41467-021-21289-y

N/A

0.727DataRank · unranked

126 citations

Florica J. Constantine, Ricardo Henao, Yiling Liu, Ephraim L. Tsalik, Thomas W. Burke +15 more

Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion

Scientific Reports(2022)10.1038/s41598-022-15668-8

N/A

0.596DataRank · unranked

52 citations

Shengli Ding, Micah T. McClain, Thomas W. Burke, Elizabeth Petzold, Hong A. Chung +19 more

A comparison of host response strategies to distinguish bacterial and viral infection

PLoS ONE(2021)10.1371/journal.pone.0261385

N/A

0.385DataRank · unranked

12 citations

Ricardo Henao, Thomas W. Burke, Emily R. Ko, Micah T. McClain, Geoffrey S. Ginsburg +3 more

Asymptomatic or mild symptomatic SARS-CoV-2 infection elicits durable neutralizing antibody responses in children and adolescents

medRxiv(2021)10.1101/2021.04.17.21255663

N/A

0.360DataRank · unranked

10 citations

Jillian H. Hurst, Cynthia G. Lorang, Jhoanna N. Aquino, Javier Rodriguez, Trevor S. Pfeiffer +14 more

Dysregulated transcriptional responses to SARS-CoV-2 in the periphery support novel diagnostic approaches

medRxiv(2020)10.1101/2020.07.20.20155507

N/A

0.312DataRank · unranked

7 citations

Florica J. Constantine, Ricardo Henao, Yiling Liu, Ephraim L. Tsalik, Thomas W. Burke +11 more

Blood RNA alternative splicing events as diagnostic biomarkers for infectious disease

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100395

N/A

0.312DataRank · unranked

7 citations

Natalie Sauerwald, Antonio Cappuccio, Irene Ramos, Venugopalan D. Nair, German Nudelman +21 more

Genetics and Environment Distinctively Shape the Human Immune Cell Epigenome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.29.546792

N/A

0.269DataRank · unranked

5 citations

Manoj Hariharan, Wubin Ding, Anna Bartlett, Cesar Barragan, Rosa G. Castanon +39 more

Innate immune molecular landscape following controlled human influenza virus infection

Cell Reports(2025)10.1016/j.celrep.2025.116312

N/A

0.269DataRank · unranked

5 citations

Sindhu Vangeti, Wan-Sze Cheng, Pankaj Agarwal, Antonio Cappuccio, Wenliang Wang +18 more

Genetics and environment distinctively shape the human immune cell epigenome

Nature Genetics(2026)10.1038/s41588-025-02479-6

N/A

0.216DataRank · unranked

3 citations

Manoj Hariharan, Wubin Ding, Anna Bartlett, Cesar Barragan, Rosa G. Castanon +40 more

Pediatric T cell and B cell responses to SARS-CoV-2 infection

JCI Insight(2025)10.1172/jci.insight.196032

N/A

0.165DataRank · unranked

2 citations

Numana Bhat, Jillian H. Hurst, Amber Myers, Thomas W. Burke, Micah T. McClain +13 more

Dissecting epigenome dynamics in human immune cells upon viral and chemical exposure by multimodal single-cell profiling

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.09.675101

N/A

0.104DataRank · unranked

1 citations

Bei Wei, Derek C. Chen, Wenliang Wang, Manoj Hariharan, Todd Norell +21 more

Validation of a Host Gene Expression Test for Bacterial/Viral Discrimination in Immunocompromised Hosts

Clinical Infectious Diseases(2021)10.1093/cid/ciab043

N/A

0DataRank · unranked

17 citations

Sunil Suchindran, Ricardo Henao, Julie M. Steinbrink, Thomas W. Burke, Micah T. McClain +4 more

Mucosal-associated invariant T cell responses differ by sex in COVID-19

Med(2021)10.1016/j.medj.2021.04.008

N/A

0DataRank · unranked

42 citations

Sejiro Littleton, Nicholas Giroux, Rose Mathew, Shengli Ding, Joan Kalnitsky +16 more

Asymptomatic or mild symptomatic SARS-CoV-2 infection elicits durable neutralizing antibody responses in children and adolescents

JCI Insight(2021)10.1172/jci.insight.150909

N/A

0DataRank · unranked

54 citations

Jillian H. Hurst, Cynthia G. Lorang, Jhoanna N. Aquino, Javier Rodriguez, Trevor S. Pfeiffer +14 more

Severe Acute Respiratory Syndrome Coronavirus 2 Viremia Is Associated With Coronavirus Disease 2019 Severity and Predicts Clinical Outcomes

Clinical Infectious Diseases(2021)10.1093/cid/ciab686

N/A

0DataRank · unranked

140 citations

William Bain, Asma Naqvi, Brittany Staines, Priscila M. S. Castanha, Haopu Yang +22 more

Single-cell genome-wide association reveals that a nonsynonymous variant in ERAP1 confers increased susceptibility to influenza virus

Cell Genomics(2022)10.1016/j.xgen.2022.100207

N/A

0DataRank · unranked

9 citations

Liuyang Wang, Xinyu Zhu, Alfred T. Harding, Emily R. Ko, Jeffrey S. Bourgeois +14 more

Single-cell genome-wide association reveals a nonsynonymous variant in ERAP1 confers increased susceptibility to influenza virus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.30.478319

N/A

0DataRank · unranked

1 citations

Liuyang Wang, Xinyu Zhu, Alfred T. Harding, Emily R. Ko, Jeffrey S. Bourgeois +14 more

Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion

Research Square(2022)10.21203/rs.3.rs-1479864/v1

N/A

0DataRank · unranked

1 citations

Shengli Ding, Micah T. McClain, Thomas W. Burke, Elizabeth Petzold, Hong A. Chung +19 more

Mast cell activation in lungs during SARS-CoV-2 infection associated with lung pathology and severe COVID-19

Journal of Clinical Investigation(2023)10.1172/jci149834

N/A

0DataRank · unranked

23 citations

Danielle E. Anderson, Abhay P. S. Rathore, Aled O’Neill, Chinmay Kumar Mantri, Wilfried A. A. Saron +14 more

Host-response transcriptional biomarkers accurately discriminate bacterial and viral infections of global relevance

Scientific Reports(2023)10.1038/s41598-023-49734-6

N/A

0DataRank · unranked

12 citations

Megan E. Reller, L. Gayani Tillekeratne, Champica K. Bodinayake, Cameron Miller, Thomas W. Burke +26 more

COVID-19 Diagnosis and SARS-CoV-2 Strain Identification by a Rapid, Multiplexed, Point-of-Care Antibody Microarray

Analytical Chemistry(2023)10.1021/acs.analchem.2c05180

N/A

0DataRank · unranked

8 citations

Rhett J. Britton, David Kinnamon, Jason Liu, Jack Anderson, Daniel Y. Joh +11 more

Host gene expression classifiers diagnose acute respiratory illness etiology

UNC Libraries(2020)10.17615/xx17-pz54

N/A

0DataRank · unranked

0 citations

Ronny Otero, Thomas W. Burke, Joseph E. Lucas, Seth W. Glickman, Lori L. Hudson +19 more

Differential host responses within the upper respiratory tract and peripheral blood of children and adults with SARS-CoV-2 infection

medRxiv(2023)10.1101/2023.07.31.23293337

N/A

0DataRank · unranked

6 citations

Aditya Mohan, Trisha Dalapati, Ian A. George, Jhoanna N. Aquino, Debra J. Lugo +17 more

Mucosal Associated Invariant T (MAIT) Cell Responses Differ by Sex in COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.407148

N/A

0DataRank · unranked

2 citations

Sejiro Littleton, Nicholas Giroux, Rose Mathew, Shengli Ding, Joan Kalnitsky +15 more

Host-response Transcriptional Biomarkers Accurately Discriminate Bacterial and Viral Infections of Global Relevance

Research Square(2023)10.21203/rs.3.rs-2419595/v1

N/A

0DataRank · unranked

0 citations

Megan E. Reller, L. Gayani Tillekeratne, Champica K. Bodinayake, Cameron Miller, Thomas W. Burke +26 more

Data from Loss of Tuberous Sclerosis Complex-2 Function and Activation of Mammalian Target of Rapamycin Signaling in Endometrial Carcinoma

(2023)10.1158/1078-0432.c.6516972

N/A

0DataRank · unranked

0 citations

William Wu, Bhuvanesh Dave, Brian M. Slomovitz, Thomas W. Burke, Mark F. Munsell +3 more

Data from Loss of Tuberous Sclerosis Complex-2 Function and Activation of Mammalian Target of Rapamycin Signaling in Endometrial Carcinoma

(2023)10.1158/1078-0432.c.6516972.v1

N/A

0DataRank · unranked

0 citations

William Wu, Bhuvanesh Dave, Brian M. Slomovitz, Thomas W. Burke, Mark F. Munsell +3 more

Epigenetic and transcriptional responses in circulating leukocytes are associated with future decompensation during SARS-CoV-2 infection

iScience(2023)10.1016/j.isci.2023.108288

N/A

0DataRank · unranked

0 citations

Ilya Y. Zhbannikov, Lisa L. Satterwhite, Ricardo Henao, Nicholas Giroux, Shengli Ding +8 more

Implementation of a Prospective Index-Cluster Sampling Strategy for the Detection of Presymptomatic Viral Respiratory Infection in Undergraduate Students

Open Forum Infectious Diseases(2024)10.1093/ofid/ofae081

N/A

0DataRank · unranked

0 citations

Micah T. McClain, Bradly P. Nicholson, Lawrence P. Park, Ilya Y. Zhbannikov, Sunil Suchindran +12 more

SARS CoV-2 Reinfection Across a Spectrum of Immunological States

(2024)10.22541/au.170666073.38985434/v1

N/A

0DataRank · unranked

0 citations

Thomas W. Burke, Elizabeth Petzold, Ephraim L. Tsalik, Gregory D. Sempowski, Christopher R. Polage +2 more

Innate immune epigenomic landscape following controlled human influenza virus infection

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.20.612974

N/A

0DataRank · unranked

0 citations

Sindhu Vangeti, Wan-Sze Cheng, Pankaj Agarwal, Antonio Cappuccio, Wenliang Wang +18 more

Chromatin remodeling in peripheral blood cells reflects COVID-19 symptom severity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.412155

N/A

0DataRank · unranked

9 citations

Shengli Ding, Micah T. McClain, Thomas W. Burke, Elizabeth Petzold, Hong A. Chung +17 more

An atlas connecting shared genetic architecture of human diseases and molecular phenotypes provides insight into COVID-19 susceptibility

medRxiv(2020)10.1101/2020.12.20.20248572

N/A

0DataRank · unranked

25 citations

Thomas J. Balmat, Alejandro L. Antonia, Florica J. Constantine, Ricardo Henao, Thomas W. Burke +11 more

A blood-based host gene expression assay for early detection of respiratory viral infection: an index-cluster prospective cohort study

The Lancet Infectious Diseases(2020)10.1016/s1473-3099(20)30486-2

N/A

0DataRank · unranked

48 citations

Florica J. Constantine, Bradly P. Nicholson, Marshall Nichols, Thomas W. Burke, Ricardo Henao +11 more