🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Sinem Beyhan

J. Craig Venter Institute

ORCID: 0000-0003-0906-7538

Also affiliated with UC San Diego Health System, University of California San Diego, VA San Diego Healthcare System

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 11 papers. Top paper: “Evaluation of Different Gene Prediction Tools in Coccidioides immitis”.

Evaluation of Different Gene Prediction Tools in Coccidioides immitis

Journal of Fungi(2023)10.3390/jof9111094
N/A
0.281DataRank · unranked
5 citations

Sinem Beyhan, Jason Stajich, Theo N. Kirkland

Upregulation of virulence genes promotes Vibrio cholerae biofilm hyperinfectivity

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1916571117
N/A
0DataRank · unranked
87 citations

William H. DePas, Jungmi Park, Jennifer K. Teschler, Raimo Hartmann, Hannah Jeckel +5 more

Chromosome-level genome assembly of a human fungal pathogen reveals synteny among geographically distinct species

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.13.452254
N/A
0DataRank · unranked
3 citations

Shirli Cohen, Terrance Shea, Semar Petrus, José F. Muñoz, Shane G. Poplawski +6 more

Transcriptional Regulatory Features associated with Coccidioides immitis phase transition

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.22.453417
N/A
0DataRank · unranked
1 citations

Sinem Beyhan, Rajendra Singh, Sonya E. Neal, Suganya Viriyakosol, Joshua Fierer +5 more

The WOPR family protein Ryp1 is a key regulator of gene expression, development, and virulence in the thermally dimorphic fungal pathogen Coccidioides posadasii

PLoS Pathogens(2022)10.1371/journal.ppat.1009832
N/A
0DataRank · unranked
27 citations

Sinem Beyhan, Mark Voorhies, Lisa F. Shubitz, John N. Galgiani, Marc J. Orbach +2 more

Decoding Transcription Regulatory Mechanisms Associated with Coccidioides immitis Phase Transition Using Total RNA

mSystems(2022)10.1128/msystems.01404-21
N/A
0DataRank · unranked
19 citations

Sinem Beyhan, Rajendra Singh, Sonya E. Neal, Suganya Viriyakosol, Joshua Fierer +5 more

A novel biosensor for ultrasensitive detection of fungal genes

Biosensors and Bioelectronics(2022)10.1016/j.bios.2022.114986
N/A
0DataRank · unranked
9 citations

Tugba Yilmaz, Shirli Cohen, Sinem Beyhan, Avni A. Argun, Muhit Rana

Genetic Diversity of Human Fungal Pathogens

Current Clinical Microbiology Reports(2023)10.1007/s40588-023-00188-4
N/A
0DataRank · unranked
14 citations

Sinem Beyhan, Jillian Freese

The Host Response to Coccidioidomycosis

Journal of Fungi(2024)10.3390/jof10030173
N/A
0DataRank · unranked
5 citations

Chiung-Yu Hung, Lisa F. Shubitz, Sinem Beyhan, Joshua Fierer, Theo N. Kirkland

Emerging Priorities for Microbiome Research

Frontiers in Microbiology(2020)10.3389/fmicb.2020.00136
N/A
0DataRank · unranked
195 citations

Kawalpreet K. Aneja, Sinem Beyhan, Clara E. Cho, Stephen Woloszynek, Matteo Convertino +14 more

Development of a Mouse Model of Coccidioidomycosis Using an Inhalation Exposure System

Journal of Fungi(2025)10.3390/jof11080599
N/A
0DataRank · unranked
1 citations

Priscila Rodriguez, Ka Pui Sharon Yau, Matthew Tate, Aaron F. Carlin, Joshua Fierer +5 more