Xuping Xie

The University of Texas Medical Branch at Galveston

Medicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 116 papers. Top paper: “Spike mutation D614G alters SARS-CoV-2 fitness”.

Spike mutation D614G alters SARS-CoV-2 fitness

Nature(2020)10.1038/s41586-020-2895-3

N/A

18.5DataRank · unranked

1768 citations

Yang Liu, Jianying Liu, Hongjie Xia, Bryan A. Johnson, Kumari G. Lokugamage +17 more

Resistance of SARS-CoV-2 variants to neutralization by monoclonal and serum-derived polyclonal antibodies

Nature Medicine(2021)10.1038/s41591-021-01294-w

N/A

16.5DataRank · unranked

1016 citations

Xianwen Zhang, James Brett Case, Emma S. Winkler, Yang Liu, Laura A. VanBlargan +27 more

SARS-CoV-2 mRNA vaccines induce persistent human germinal centre responses

Nature(2021)10.1038/s41586-021-03738-2

N/A

15.6DataRank · unranked

885 citations

Jane A. O’Halloran, Elizaveta Kalaidina, Wooseob Kim, Aaron J. Schmitz, Julian Q. Zhou +18 more

An Infectious cDNA Clone of SARS-CoV-2

Cell Host & Microbe(2020)10.1016/j.chom.2020.04.004

N/A

14.3DataRank · unranked

773 citations

Antonio E. Muruato, Kumari G. Lokugamage, Krishna Narayanan, Xianwen Zhang, Jing Zou +11 more

Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail

Nature Microbiology(2021)10.1038/s41564-021-00972-2

N/A

9.6DataRank · unranked

330 citations

Seth J. Zost, Allison J. Greaney, Tyler N. Starr, Adam S. Dingens, Elaine C. Chen +27 more

Furin Cleavage Site Is Key to SARS-CoV-2 Pathogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.26.268854

N/A

7.5DataRank · unranked

207 citations

Xuping Xie, Birte Kalveram, Kumari G. Lokugamage, Antonio E. Muruato, Jing Zou +24 more

The N501Y spike substitution enhances SARS-CoV-2 transmission

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.08.434499

N/A

6.8DataRank · unranked

155 citations

Jianying Liu, Kenneth S. Plante, Jessica A. Plante, Xuping Xie, Xianwen Zhang +8 more

Neutralization of Omicron sublineages and Deltacron SARS-CoV-2 by three doses of BNT162b2 vaccine or BA.1 infection

Emerging Microbes & Infections(2022)10.1080/22221751.2022.2099305

N/A

1.7DataRank · unranked

50 citations

Jing Zou, Hongjie Xia, Mingru Liu, Qi Yang, Mark Cutler +9 more

In vivo monoclonal antibody efficacy against SARS-CoV-2 variant strains

Research Square(2021)10.21203/rs.3.rs-448370/v1

N/A

1.5DataRank · unranked

31 citations

Rita Chen, Emma S. Winkler, James Brett Case, Ishmael D. Aziati, Traci L. Bricker +27 more

Topoisomerase III-β is required for efficient replication of positive-sense RNA viruses

Antiviral Research(2020)10.1016/j.antiviral.2020.104874

N/A

1.1DataRank · unranked

28 citations

Minato Hirano, W. Samuel Fagg, Eileen T. McAnarney, Chao Shan, Xuping Xie +10 more

Evasion of Type I Interferon by SARS-CoV-2

Cell Reports(2020)10.1016/j.celrep.2020.108234

N/A

1.0DataRank · unranked

1037 citations

Zengguo Cao, Xuping Xie, Xianwen Zhang, John Yun-Chung Chen, Hualei Wang +4 more

Loss of furin cleavage site attenuates SARS-CoV-2 pathogenesis

Nature(2021)10.1038/s41586-021-03237-4

N/A

1.0DataRank · unranked

788 citations

Xuping Xie, Adam L. Bailey, Birte Kalveram, Kumari G. Lokugamage, Antonio E. Muruato +28 more

Inhibition of japanese encephalitis virus infection by flavivirus recombinant e protein domain III

Virologica Sinica(2013)10.1007/s12250-013-3331-8

N/A

0.994DataRank · unranked

19 citations

Yi Liu, Xuping Xie, Bo Zhang, Zhiming Yuan, Jingjing Fan

Neutralization of SARS-CoV-2 spike 69/70 deletion, E484K and N501Y variants by BNT162b2 vaccine-elicited sera

Nature Medicine(2021)10.1038/s41591-021-01270-4

N/A

0.977DataRank · unranked

674 citations

Yang Liu, Jianying Liu, Xianwen Zhang, Jing Zou, Camila R. Fontes-Garfias +9 more

The N501Y spike substitution enhances SARS-CoV-2 infection and transmission

Nature(2021)10.1038/s41586-021-04245-0

N/A

0.951DataRank · unranked

564 citations

Jianying Liu, Kenneth S. Plante, Jessica A. Plante, Xuping Xie, Xianwen Zhang +9 more

Low neutralization of SARS-CoV-2 Omicron BA.2.75.2, BQ.1.1 and XBB.1 by parental mRNA vaccine or a BA.5 bivalent booster

Nature Medicine(2022)10.1038/s41591-022-02162-x

N/A

0.916DataRank · unranked

449 citations

Jing Zou, Hongjie Xia, Mingru Liu, Hope C. Chang, Ping Ren +3 more

Delta spike P681R mutation enhances SARS-CoV-2 fitness over Alpha variant

Cell Reports(2022)10.1016/j.celrep.2022.110829

N/A

0.897DataRank · unranked

395 citations

Jianying Liu, Bryan A. Johnson, Hongjie Xia, Zhiqiang Ku, Craig Schindewolf +7 more

Neutralization of Omicron SARS-CoV-2 by 2 or 3 doses of BNT162b2 vaccine

10.1101/2022.01.21.476344

N/A

0.877DataRank · unranked

15 citations

Jing Zou, Chaitanya Kurhade, Hui Cai, Qi Yang, Mark Cutler +7 more

A high-throughput neutralizing antibody assay for COVID-19 diagnosis and vaccine evaluation

Nature Communications(2020)10.1038/s41467-020-17892-0

N/A

0.873DataRank · unranked

336 citations

Camila R. Fontes-Garfias, Ping Ren, Mariano A. García-Blanco, Vineet D. Menachery, Xuping Xie +2 more

In vivo monoclonal antibody efficacy against SARS-CoV-2 variant strains

Nature(2021)10.1038/s41586-021-03720-y

N/A

0.836DataRank · unranked

262 citations

Emma S. Winkler, James Brett Case, Ishmael D. Aziati, Traci L. Bricker, Astha Joshi +29 more

A nanoluciferase SARS-CoV-2 for rapid neutralization testing and screening of anti-infective drugs for COVID-19

Nature Communications(2020)10.1038/s41467-020-19055-7

N/A

0.824DataRank · unranked

242 citations

Antonio E. Muruato, Xianwen Zhang, Kumari G. Lokugamage, Camila R. Fontes-Garfias, Jing Zou +10 more

Engineering SARS-CoV-2 using a reverse genetic system

Nature Protocols(2021)10.1038/s41596-021-00491-8

N/A

0.803DataRank · unranked

211 citations

Kumari G. Lokugamage, Xianwen Zhang, Michelle N. Vu, Antonio E. Muruato, Vineet D. Menachery +2 more

Delta spike P681R mutation enhances SARS-CoV-2 fitness over Alpha variant

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.12.456173

N/A

0.796DataRank · unranked

201 citations

Jianying Liu, Bryan A. Johnson, Hongjie Xia, Zhiqiang Ku, Craig Schindewolf +7 more

Molecular determinants and mechanism for antibody cocktail preventing SARS-CoV-2 escape

Nature Communications(2021)10.1038/s41467-020-20789-7

N/A

0.781DataRank · unranked

181 citations

Xuping Xie, Edgar Davidson, Xiaohua Ye, Hang Su, Vineet D. Menachery +16 more

Envelope protein ubiquitination drives entry and pathogenesis of Zika virus

Nature(2020)10.1038/s41586-020-2457-8

N/A

0.768DataRank · unranked

166 citations

Hongjie Xia, Leopoldo Aguilera-Aguirre, Adam Hage, Sarah van Tol, Chao Shan +17 more

Neutralization of N501Y mutant SARS-CoV-2 by BNT162b2 vaccine-elicited sera

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.07.425740

N/A

0.763DataRank · unranked

161 citations

Jing Zou, Camila R. Fontes-Garfias, Hongjie Xia, Kena A. Swanson, Mark Cutler +6 more

Neutralization against Omicron SARS-CoV-2 from previous non-Omicron infection

Nature Communications(2022)10.1038/s41467-022-28544-w

N/A

0.732DataRank · unranked

131 citations

Hongjie Xia, Xuping Xie, Chaitanya Kurhade, Rafael Rahal Guaragna Machado, Scott C. Weaver +3 more

Neutralization of SARS-CoV-2 spike 69/70 deletion, E484K, and N501Y variants by BNT162b2 vaccine-elicited sera

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.27.427998

N/A

0.718DataRank · unranked

119 citations

Yang Liu, Jianying Liu, Xianwen Zhang, Jing Zou, Camila R. Fontes-Garfias +9 more

BNT162b2-Elicited Neutralization against New SARS-CoV-2 Spike Variants

New England Journal of Medicine(2021)10.1056/nejmc2106083

N/A

0.706DataRank · unranked

110 citations

Jianying Liu, Hongjie Xia, Xianwen Zhang, Jing Zou, Camila R. Fontes-Garfias +14 more

Spike mutation D614G alters SARS-CoV-2 fitness and neutralization susceptibility

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.01.278689

N/A

0.688DataRank · unranked

97 citations

Yang Liu, Jianying Liu, Hongjie Xia, Bryan A. Johnson, Kumari G. Lokugamage +17 more

SARS-CoV-2 variants show resistance to neutralization by many monoclonal and serum-derived polyclonal antibodies

Research Square(2021)10.21203/rs.3.rs-228079/v1

N/A

0.677DataRank · unranked

90 citations

Rita Chen, Xuping Xie, James Brett Case, Xianwen Zhang, Laura A. VanBlargan +26 more

Mouse-adapted SARS-CoV-2 protects animals from lethal SARS-CoV challenge

PLoS Biology(2021)10.1371/journal.pbio.3001284

N/A

0.673DataRank · unranked

88 citations

Michelle N. Vu, Bryan A. Johnson, Meredith E. Davis-Gardner, Abigail Vanderheiden, Kumari G. Lokugamage +14 more

Neutralization of Omicron BA.1, BA.2, and BA.3 SARS-CoV-2 by 3 doses of BNT162b2 vaccine

Nature Communications(2022)10.1038/s41467-022-30681-1

N/A

0.670DataRank · unranked

86 citations

Jing Zou, Hongjie Xia, Hui Cai, Qi Yang, Mark Cutler +7 more

A trans-complementation system for SARS-CoV-2 recapitulates authentic viral replication without virulence

Cell(2021)10.1016/j.cell.2021.02.044

N/A

0.666DataRank · unranked

84 citations

Yang Liu, Jianying Liu, Adam L. Bailey, Kenneth S. Plante, Jessica A. Plante +11 more

Genetic and structural basis for recognition of SARS-CoV-2 spike protein by a two-antibody cocktail

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.27.428529

N/A

0.633DataRank · unranked

67 citations

Seth J. Zost, Allison J. Greaney, Tyler N. Starr, Adam S. Dingens, Elaine C. Chen +27 more

Structure and inhibition of SARS-CoV-2 spike refolding in membranes

Science(2024)10.1126/science.adn5658

N/A

0.596DataRank · unranked

52 citations

Zhuan Qin, Esteban Dodero-Rojas, Shilei Ding, Jérémie Prévost, Yaozong Chen +10 more

Flavivirus NS4B protein: Structure, function, and antiviral discovery

Antiviral Research(2022)10.1016/j.antiviral.2022.105423

N/A

0.593DataRank · unranked

51 citations

Xuping Xie, Pei‐Yong Shi, Yan Wang

Infection and mRNA-1273 vaccine antibodies neutralize SARS-CoV-2 UK variant

medRxiv(2021)10.1101/2021.02.02.21250799

N/A

0.590DataRank · unranked

50 citations

Katharine Floyd, Lilin Lai, Meredith E. Davis-Gardner, William Henry Hudson, Anne Piantadosi +10 more

A high-throughput neutralizing antibody assay for COVID-19 diagnosis and vaccine evaluation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.21.109546

N/A

0.587DataRank · unranked

49 citations

Camila R. Fontes-Garfias, Ping Ren, Mariano A. García-Blanco, Vineet D. Menachery, Xuping Xie +2 more

The effect of SARS-CoV-2 D614G mutation on BNT162b2 vaccine-elicited neutralization

npj Vaccines(2021)10.1038/s41541-021-00313-8

N/A

0.571DataRank · unranked

44 citations

Xuping Xie, Camila R. Fontes-Garfias, Kena A. Swanson, Isis Kanevsky, Kristin R. Tompkins +5 more

Neutralization of N501Y mutant SARS-CoV-2 by BNT162b2 vaccine-elicited sera

Research Square(2021)10.21203/rs.3.rs-143532/v1

N/A

0.571DataRank · unranked

44 citations

Xuping Xie, Jing Zou, Camila R. Fontes-Garfias, Hongjie Xia, Kena A. Swanson +6 more

Determinants and Mechanisms of the Low Fusogenicity and High Dependence on Endosomal Entry of Omicron Subvariants

mBio(2023)10.1128/mbio.03176-22

N/A

0.564DataRank · unranked

42 citations

John P. Evans, Chaitanya Kurhade, Cong Zeng, Yi-Min Zheng, Kai Xu +4 more

Integrated multi-omics analyses identify anti-viral host factors and pathways controlling SARS-CoV-2 infection

Nature Communications(2024)10.1038/s41467-023-44175-1

N/A

0.561DataRank · unranked

41 citations

Yanjun Wei, Jing Zou, Roshni Jaffery, Long Sun, Shaoheng Liang +16 more

A nanoluciferase SARS-CoV-2 for rapid neutralization testing and screening of anti-infective drugs for COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.22.165712

N/A

0.561DataRank · unranked

41 citations

Antonio E. Muruato, Xianwen Zhang, Kumari G. Lokugamage, Camila R. Fontes-Garfias, Jing Zou +10 more

Role of microglia in the dissemination of Zika virus from mother to fetal brain

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008413

N/A

0.553DataRank · unranked

39 citations

Chao Shan, Tiffany Dunn, Xuping Xie, Hongjie Xia, Junling Gao +12 more

The RNA helicase DHX16 recognizes specific viral RNA to trigger RIG-I-dependent innate antiviral immunity

Cell Reports(2022)10.1016/j.celrep.2022.110434

N/A

0.546DataRank · unranked

37 citations

Preeti Bharaj, Sarah van Tol, María I. Giraldo, María González-Orozco, Karl M. Valerdi +13 more

TRIM7 ubiquitinates SARS-CoV-2 membrane protein to limit apoptosis and viral replication

Nature Communications(2024)10.1038/s41467-024-54762-5

N/A

0.541DataRank · unranked

15 citations

Tseng Hsiang-Chi, Adam Hage, Hongjie Xia, P. Behera, Kazi Afreen +23 more

Integrated multi-omics analyses identify key anti-viral host factors and pathways controlling SARS-CoV-2 infection

Research Square(2022)10.21203/rs.3.rs-1910932/v1

N/A

0.538DataRank · unranked

11 citations

Yanjun Wei, Jing Zou, Roshni Jaffery, Shaoheng Liang, Caishang Zheng +6 more

SARS-CoV-2 Infects Human Engineered Heart Tissues and Models COVID-19 Myocarditis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.04.364315

N/A

0.533DataRank · unranked

34 citations

Oleksandr Dmytrenko, Lina Greenberg, Andrea Bredemeyer, Pan Ma, Jianjun Liu +24 more

Identifying optimal capsid duplication length for the stability of reporter flaviviruses

Emerging Microbes & Infections(2020)10.1080/22221751.2020.1829994

N/A

0.529DataRank · unranked

33 citations

Yang Liu, Jing Zou, Antonio E. Muruato, Xuping Xie, Pei‐Yong Shi +1 more

A cocrystal structure of dengue capsid protein in complex of inhibitor

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2003056117

N/A

0.524DataRank · unranked

32 citations

Xuping Xie, Jing Zou, Christian G. Noble, William K. Russell, Luis Marcelo F. Holthauzen +4 more

Using recombination-dependent lethal mutations to stabilize reporter flaviviruses for rapid serodiagnosis and drug discovery

EBioMedicine(2020)10.1016/j.ebiom.2020.102838

N/A

0.515DataRank · unranked

30 citations

Xuping Xie, Jing Zou, Antonio E. Muruato, Katja Fink, Pei‐Yong Shi +1 more

Neutralization of SARS-CoV-2 Omicron sublineages by 4 doses of the original mRNA vaccine

Cell Reports(2022)10.1016/j.celrep.2022.111729

N/A

0.500DataRank · unranked

27 citations

Jing Zou, Chaitanya Kurhade, Mingru Liu, Ping Ren, Pei‐Yong Shi +1 more

Mouse Adapted SARS-CoV-2 protects animals from lethal SARS-CoV challenge

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.03.442357

N/A

0.477DataRank · unranked

23 citations

Michelle N. Vu, Bryan A. Johnson, Meredith E. Davis-Gardner, Abigail Vanderheiden, Kumari Lokugmage +14 more

SARS-COV-2 Omicron variants conformationally escape a rare quaternary antibody binding mode

Communications Biology(2023)10.1038/s42003-023-05649-6

N/A

0.470DataRank · unranked

9 citations

Ching‐Lin Hsieh, Andrew P. Horton, Elizabeth C. Gardner, Ling Zhou, Foteini Bartzoka +25 more

Cross-neutralization and viral fitness of SARS-CoV-2 Omicron sublineages

Emerging Microbes & Infections(2023)10.1080/22221751.2022.2161422

N/A

0.442DataRank · unranked

18 citations

Jason Yeung, Birte Kalveram, Cody J. Bills, John Yun-Chung Chen, Chaitanya Kurhade +10 more

Neutralization against Omicron SARS-CoV-2 from previous non-Omicron infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.20.473584

N/A

0.434DataRank · unranked

17 citations

Hongjie Xia, Xuping Xie, Chaitanya Kurhade, Rafael Rahal Guaragna Machado, Scott C. Weaver +3 more

SARS-CoV-2 mRNA vaccines induce a robust germinal centre reaction in humans

Research Square(2021)10.21203/rs.3.rs-310773/v1

N/A

0.406DataRank · unranked

14 citations

Jackson S. Turner, Jane A. O’Halloran, Elizaveta Kalaidina, Wooseob Kim, Aaron J. Schmitz +17 more

Identification of an immunogenic epitope and protective antibody against the furin cleavage site of SARS-CoV-2

EBioMedicine(2022)10.1016/j.ebiom.2022.104401

N/A

0.405DataRank · unranked

7 citations

Meiling Gao, Jie Li, Xuping Xie, Hui Zhao, Yanan Wang +14 more

Design, synthesis and biological evaluation of spiropyrazolopyridone derivatives as potent dengue virus inhibitors

Bioorganic & Medicinal Chemistry Letters(2020)10.1016/j.bmcl.2020.127162

N/A

0.396DataRank · unranked

13 citations

Xuping Xie, Haiying Chen, Jing Zou, Yu Xue, Na Ye +3 more

Mechanistic insights into dengue virus inhibition by a clinical trial compound NITD-688

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2426922122

N/A

0.396DataRank · unranked

13 citations

Long Sun, Luciana de Souza Fernandes, YH Wang, Jing Zou, Samuel J. Franklin +10 more

A Single-Round Infection Fluorescent SARS-CoV-2 Neutralization Test for COVID-19 Serological Testing at a Biosafety Level-2 Laboratory

Viruses(2022)10.3390/v14061211

N/A

0.396DataRank · unranked

13 citations

Hongjie Xia, Pei‐Yong Shi, Xuping Xie, Ping Ren, Jing Zou

Oral Supplementation with AHCC®, a Standardized Extract of Cultured Lentinula edodes Mycelia, Enhances Host Resistance against SARS-CoV-2 Infection

Pathogens(2023)10.3390/pathogens12040554

N/A

0.385DataRank · unranked

12 citations

Awadalkareem Adam, Leslie Rodriguez, Bi‐Hung Peng, Binbin Wang, Xuping Xie +4 more

A live-attenuated SARS-CoV-2 vaccine candidate with accessory protein deletions

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.14.480460

N/A

0.345DataRank · unranked

9 citations

Xianwen Zhang, Jianying Liu, Hongjie Xia, Jing Zou, Antonio E. Muruato +13 more

Lessons learnt from broad-spectrum coronavirus antiviral drug discovery

Expert Opinion on Drug Discovery(2024)10.1080/17460441.2024.2385598

N/A

0.330DataRank · unranked

8 citations

Jun Li, Xuping Xie, Hongmin Li, Jia Zhou, Andrew A. Bolinger

Infection Kinetics and Transmissibility of a Reanimated Dengue Virus Serotype 4 Identified Originally in Wild Aedes aegypti From Florida

Frontiers in Microbiology(2021)10.3389/fmicb.2021.734903

N/A

0.312DataRank · unranked

7 citations

Xuping Xie, Heather Coatsworth, Caroline J. Stephenson, Christy M. Waits, Pei‐Yong Shi +2 more

Targeting G9a-m6A translational mechanism of SARS-CoV-2 pathogenesis for multifaceted therapeutics of COVID-19 and its sequalae

iScience(2025)10.1016/j.isci.2025.112632

N/A

0.165DataRank · unranked

2 citations

Ling Xie, Xuping Xie, Feng Zhang, John A. Wrobel, Yan Xiong +11 more

A single-dose of intranasal vaccination with a live-attenuated SARS-CoV-2 vaccine candidate promotes protective mucosal and systemic immunity

npj Vaccines(2023)10.1038/s41541-023-00753-4

N/A

0DataRank · unranked

14 citations

Birte Kalveram, John Yun-Chung Chen, Jason Yeung, Leslie Rodriguez, Ankita Singh +4 more

Metformin restrains ZIKV replication and alleviates virus-induced inflammatory responses in microglia

International Immunopharmacology(2023)10.1016/j.intimp.2023.110512

N/A

0DataRank · unranked

9 citations

Hui Wang, Panpan Yi, Coleman Baker, G A Casey, Xuping Xie +9 more

Less neutralization evasion of SARS-CoV-2 BA.2.86 than XBB sublineages and CH.1.1

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.10.557047

N/A

0DataRank · unranked

13 citations

Jing Zou, Chaitanya Kurhade, Xiangxue Deng, Hope C. Chang, Debora K. Kim +4 more

S:D614G and S:H655Y are gateway mutations that act epistatically to promote SARS-CoV-2 variant fitness

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.30.535005

N/A

0DataRank · unranked

7 citations

Shawn B. Egri, Chaitanya Kurhade, Marco A Díaz-Salinas, Javier A. Jaimes, Thomas Nyalile +9 more

HIF-dependent induction of alveolar miR-147 dampens SARS-CoV-2 immune evasion

Research Square(2023)10.21203/rs.3.rs-2319034/v1

N/A

0DataRank · unranked

1 citations

Xiaoyi Yuan, Ji-Eun Kim, Yanyu Wang, Lingegowda S. Mangala, Cristian Rodriguez‐Aguayo +12 more

Corrigendum to “Discovery of lead natural products for developing pan-SARS-CoV-2 therapeutics” “Antiviral Research 209 (2023)/105484”

Antiviral Research(2023)10.1016/j.antiviral.2023.105577

N/A

0DataRank · unranked

0 citations

Tirosh Shapira, Andrea D. Olmstead, Iván Villanueva, Connor A.H. Thompson, Siobhan Ennis +40 more

A single-dose of intranasal vaccination with a live-attenuated SARS-CoV-2 vaccine candidate promotes protective mucosal and systemic immunity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.17.537235

N/A

0DataRank · unranked

0 citations

Birte Kalveram, John Yun-Chung Chen, Jason Yeung, Leslie Rodriguez, Ankita Singh +4 more

Discovery of First-in-Class PROTAC Degraders of SARS-CoV-2 Main Protease

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.3c02416

N/A

0DataRank · unranked

75 citations

Jing Xiao, Kaustav Khatua, Sathish Kumar, Long Sun, Yuying Ma +10 more

Pellino-1, a therapeutic target for control of SARS-CoV-2 infection and disease severity

Antiviral Research(2024)10.1016/j.antiviral.2024.106059

N/A

0DataRank · unranked

2 citations

Hongjie Xia, Bi‐Hung Peng, Eun-Jin Choi, Bing Tian, Xuping Xie +6 more

Targeting G9a translational mechanism of SARS-CoV-2 pathogenesis for multifaceted therapeutics of COVID-19 and its sequalae

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.04.583415

N/A

0DataRank · unranked

0 citations

Ling Xie, Xuping Xie, Feng Zhang, John A. Wrobel, Yan Xiong +11 more

Comparative analysis of replication and immune evasion among SARS-CoV-2 subvariants BA.2.86, JN.1, KP.2, and KP.3

mBio(2025)10.1128/mbio.03503-24

N/A

0DataRank · unranked

9 citations

Jing Zou, Mieu Nguyen, Hope C. Chang, Jason Yeung, Haiping Hao +4 more

Intracranial injection of genetically modified, mosquito non-transmissible Zika virus: Safety in primates and ramifications for brain tumor therapy

Cell Reports Medicine(2025)10.1016/j.xcrm.2025.102509

N/A

0DataRank · unranked

2 citations

Amanda De Andrade Costa, Cody N. German, Christopher J. Parkins, Jessica L. Smith, Emilie V. Russler-Germain +12 more

A dual-reporter HCoV-OC43 for coronavirus biology and countermeasure development

Antiviral Research(2025)10.1016/j.antiviral.2025.106306

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2 citations

Jing Zou, Zhenjie Liang, Ping Ren, Pei‐Yong Shi, Vineet D. Menachery +2 more

VSA-2, a novel plant-derived adjuvant for SARS-CoV-2 subunit vaccine

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.22.677856

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0 citations

Christy Lee, Madison C Jones, Brinley R Harrington, Jing Zou, Bi‐Hung Peng +4 more

HIF-dependent induction of alveolar miR-147b dampens SARS-CoV-2 immune evasion 3751

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.1516

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0 citations

Ji-Eun Kim, Katherine Figarella, Yanyu Wang, Oleg Makarevich, Wei Ruan +19 more

Inhibition of Coronavirus Entry In Vitro and Ex Vivo by a Lipid-Conjugated Peptide Derived from the SARS-CoV-2 Spike Glycoprotein HRC Domain

mBio(2020)10.1128/mbio.01935-20

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84 citations

Francesca T. Bovier, Megan C. Mears, Maria N.B. Cajimat, Yun Zhu, Michelle J. Lin +11 more

Ultrapotent miniproteins targeting the SARS-CoV-2 receptor-binding domain protect against infection and disease

Cell Host & Microbe(2021)10.1016/j.chom.2021.06.008

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73 citations

Rita E. Chen, Longxing Cao, Baoling Ying, Emma S. Winkler, Max Johnson +13 more

A Zika virus envelope mutation preceding the 2015 epidemic enhances virulence and fitness for transmission

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2005722117

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94 citations

Hongjie Xia, Sherry L. Haller, Sasha R. Azar, Yang Liu, Jianying Liu +12 more

Inhibition of innate immune response ameliorates Zika virus-induced neurogenesis deficit in human neural stem cells

PLoS neglected tropical diseases(2021)10.1371/journal.pntd.0009183

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11 citations

Junling Gao, Chao Shan, Tiffany Dunn, Xuping Xie, Hongjie Xia +10 more

Neutralizing Antibodies Against SARS-CoV-2 Variants After Infection and Vaccination

JAMA(2021)10.1001/jama.2021.4388

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168 citations

William Henry Hudson, Xuping Xie, Rafi Ahmed, Mehul S. Suthar, Venkata Viswanadh Edara

Nasal delivery of an IgM offers broad protection from SARS-CoV-2 variants

Nature(2021)10.1038/s41586-021-03673-2

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186 citations

Xuping Xie, Paul R. Hinton, Xinli Liu, Xiaohua Ye, Antonio E. Muruato +20 more

SARS-CoV-2 Infects Human Engineered Heart Tissues and Models COVID-19 Myocarditis

JACC Basic to Translational Science(2021)10.1016/j.jacbts.2021.01.002

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202 citations

Oleksandr Dmytrenko, Lina Greenberg, Andrea Bredemeyer, Pan Ma, Jing Liu +24 more

Topoisomerase III-ß is required for efficient replication of positive-sense RNA viruses

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.24.005900

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5 citations

Minato Hirano, W. Samuel Fagg, Eileen T. McAnarney, Chao Shan, Xuping Xie +10 more

The N501Y spike substitution enhances SARS-CoV-2 transmission

Research Square(2021)10.21203/rs.3.rs-311070/v1

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52 citations

Yang Liu, Jianying Liu, Kenneth S. Plante, Jessica A. Plante, Xuping Xie +8 more

Spike mutation D614G alters SARS-CoV-2 fitness and neutralization susceptibility

PubMed(2020)10.21203/rs.3.rs-70482/v1

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48 citations

Jessica A. Plante, Yang Liu, Jianying Liu, Hongjie Xia, Bryan A. Johnson +17 more

Distinct neutralizing kinetics and magnitudes elicited by different SARS-CoV-2 variant spikes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.02.458740

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8 citations

Jianying Liu, Jing Zou, Ping Ren, Scott C. Weaver, Xuping Xie +2 more

A modified porous silicon microparticle promotes mucosal delivery of SARS-CoV-2 antigen and induction of potent and durable systemic and mucosal T helper 1 skewed protective immunity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.22.469576

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6 citations

Qing Shi, Binbin Wang, Jing Zou, Junhua Mai, Samantha R. Osman +8 more

Ultrapotent miniproteins targeting the receptor-binding domain protect against SARS-CoV-2 infection and disease in mice

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.01.433110

N/A

0DataRank · unranked

3 citations

Rita E. Chen, Longxing Cao, Baoling Ying, Emma S. Winkler, Inna Goreshnik +11 more

Ecology and transmission of a dengue virus serotype 4 identified in wild Aedes aegypti in Florida

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.11.451177

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2 citations

Xuping Xie, Heather Coatsworth, Caroline J. Stephenson, Christy M. Waits, Pei‐Yong Shi +2 more

A trans -complementation system for SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.16.426970

N/A

0DataRank · unranked

0 citations

Yang Liu, Jianying Liu, Adam L. Bailey, Kenneth S. Plante, Jessica A. Plante +11 more

Nucleocapsid mutations in SARS-CoV-2 augment replication and pathogenesis

PLoS Pathogens(2022)10.1371/journal.ppat.1010627

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169 citations

Yiyang Zhou, Kumari G. Lokugamage, Michelle N. Vu, Nathen E. Bopp, Patricia A. Crocquet-Valdes +14 more

SARS-CoV-2 disrupts host epigenetic regulation via histone mimicry

Nature(2022)10.1038/s41586-022-05282-z

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152 citations

Samuel Thudium, David M. Renner, Karl M. Glastad, Katherine C. Palozola, Zhen Zhang +20 more

A live-attenuated SARS-CoV-2 vaccine candidate with accessory protein deletions

Nature Communications(2022)10.1038/s41467-022-31930-z

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96 citations

Xianwen Zhang, Jianying Liu, Hongjie Xia, Jing Zou, Antonio E. Muruato +14 more

Engineering SARS-CoV-2 specific cocktail antibodies into a bispecific format improves neutralizing potency and breadth

Nature Communications(2022)10.1038/s41467-022-33284-y

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49 citations

Xuping Xie, Jianqing Lin, Peng Gao, Bin Wu, Abbas El Sahili +20 more

Reverse genetic systems of SARS-CoV-2 for antiviral research

Antiviral Research(2022)10.1016/j.antiviral.2022.105486

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36 citations

Xuping Xie, Pei‐Yong Shi, Chaitanya Kurhade

Cross-neutralization of Omicron BA.1 against BA.2 and BA.3 SARS-CoV-2

Nature Communications(2022)10.1038/s41467-022-30580-5

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30 citations

Chaitanya Kurhade, Hongjie Xia, Mingru Liu, Xuping Xie, Ping Ren +2 more

A modified porous silicon microparticle potentiates protective systemic and mucosal immunity for SARS-CoV-2 subunit vaccine

Translational research(2022)10.1016/j.trsl.2022.06.004

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18 citations

Qing Shi, Binbin Wang, Jing Zou, Junhua Mai, Samantha R. Osman +8 more

Design, synthesis, and pharmacological evaluations of pyrrolo[1,2-a]quinoxaline-based derivatives as potent and selective sirt6 activators

European Journal of Medicinal Chemistry(2022)10.1016/j.ejmech.2022.114998

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18 citations

Shuizhen Shi, Gang Liu, Xuping Xie, Jun Li, Andrew A. Bolinger +6 more

Cross-neutralization and cross-protection among SARS-CoV-2 viruses bearing different variant spikes

Signal Transduction and Targeted Therapy(2022)10.1038/s41392-022-01137-1

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17 citations

Jianying Liu, Jing Zou, Birte Kalveram, Rafael Rahal Guaragna Machado, Ping Ren +6 more

The arrival of SARS-CoV-2–neutralizing antibodies in a currently available commercial immunoglobulin

Journal of Allergy and Clinical Immunology(2022)10.1016/j.jaci.2022.03.026

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12 citations

Nicholas L. Rider, Richard B. Pyles, Barbara M. Judy, Xuping Xie, Pei‐Yong Shi +2 more

Low neutralization of SARS-CoV-2 Omicron BA.2.75.2, BQ.1.1, and XBB.1 by 4 doses of parental mRNA vaccine or a BA.5-bivalent booster

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.31.514580

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34 citations

Jing Zou, Hongjie Xia, Mingru Liu, Hope C. Chang, Ping Ren +3 more

Neutralization of SARS-CoV-2 Omicron sublineages by 4 doses of mRNA vaccine

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.29.502055

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15 citations

Jing Zou, Chaitanya Kurhade, Mingru Liu, Ping Ren, Pei‐Yong Shi +1 more

Engineering SARS-CoV-2 cocktail antibodies into a bispecific format improves neutralizing potency and breadth

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.01.478504

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9 citations

Xuping Xie, Jianqing Lin, Peng Gao, Abbas El Sahili, Hang Su +18 more

Neutralization of Omicron sublineages and Deltacron SARS-CoV-2 by 3 doses of BNT162b2 vaccine or BA.1 infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.05.494889

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9 citations

Jing Zou, Hongjie Xia, Mingru Liu, Qi Yang, Mark Cutler +9 more

Determinants and Mechanisms of the Low Fusogenicity and Endosomal Entry of Omicron Subvariants

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.15.512322

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8 citations

John P. Evans, Chaitanya Kurhade, Cong Zeng, Yi-Min Zheng, Kai Xu +4 more

Cross-neutralization of Omicron BA.1 against BA.2 and BA.3 SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.30.486409

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3 citations

Chaitanya Kurhade, Hongjie Xia, Mingru Liu, Xuping Xie, Ping Ren +2 more

SARS-CoV-2 Delta breakthrough infections in vaccinated patients

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.12.488092

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3 citations

Xuping Xie, Mingru Liu, Pei‐Yong Shi, Ping Ren, Jing Zou

Cross-neutralization and viral fitness of SARS-CoV-2 Omicron sublineages

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.08.515725

N/A

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1 citations

Jason Yeung, Birte Kalveram, Cody J. Bills, John Yun-Chung Chen, Chaitanya Kurhade +10 more

Less neutralization evasion of SARS-CoV-2 BA.2.86 than XBB sublineages and CH.1.1

Emerging Microbes & Infections(2023)10.1080/22221751.2023.2271089

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51 citations

Jing Zou, Chaitanya Kurhade, Xiangxue Deng, Hope C. Chang, Debora K. Kim +4 more