Vinícius M. de Oliveira

Biochemistry, Genetics and Molecular BiologyMaterials ScienceMedicineChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 7 papers. Top paper: “GPU-Accelerated All-Atom Particle-Mesh Ewald Continuous Constant pH Molecular Dynamics in Amber”.

GPU-Accelerated All-Atom Particle-Mesh Ewald Continuous Constant pH Molecular Dynamics in Amber

Journal of Chemical Theory and Computation(2022)10.1021/acs.jctc.2c00586

N/A

0.695DataRank · unranked

102 citations

Ruibin Liu, Vinícius M. de Oliveira, Erik Antonio Vázquez-Montelongo, Jack A. Henderson, Zhong‐Yin Zhang +1 more

Constant pH molecular dynamics simulations: Current status and recent applications

Current Opinion in Structural Biology(2022)10.1016/j.sbi.2022.102498

N/A

0DataRank · unranked

96 citations

Ruibin Liu, Zhong‐Yin Zhang, Vinícius M. de Oliveira

GPU-Accelerated All-atom Particle-Mesh Ewald Continuous Constant pH Molecular Dynamics in Amber

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.04.494833

N/A

0DataRank · unranked

4 citations

Ruibin Liu, Vinícius M. de Oliveira, Erik Vaquez Montelongo, Jack A. Henderson, Zhong‐Yin Zhang +1 more

An Integrative Approach to Dissect the Drug Resistance Mechanism of the H172Y Mutation of SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.31.502215

N/A

0DataRank · unranked

2 citations

Vinícius M. de Oliveira, Mohamed Fouad Ibraham, Xinyuanyuan Sun, Paween Mahinthichaichan, Mingzhe Shen +3 more

Integrative Approach to Dissect the Drug Resistance Mechanism of the H172Y Mutation of SARS-CoV-2 Main Protease

Journal of Chemical Information and Modeling(2023)10.1021/acs.jcim.3c00344

N/A

0DataRank · unranked

22 citations

Vinícius M. de Oliveira, Mohamed Fouad Ibrahim, Xinyuanyuan Sun, Paween Mahinthichaichan, Mingzhe Shen +3 more

Why is the Omicron main protease of SARS-CoV-2 less stable than its wild-type counterpart? A crystallographic, biophysical, and theoretical study

hLife(2024)10.1016/j.hlife.2024.06.003

N/A

0DataRank · unranked

9 citations

Xinyuanyuan Sun, Vinícius M. de Oliveira, Ruibin Liu, Joseph Clayton, Haifa El Kilani +3 more

Why is the Omicron main protease of SARS-CoV-2 less stable than its wild-type counterpart? A crystallographic, biophysical, and theoretical study of the free enzyme and its complex with inhibitor 13b-K

Inorg. Mater. (Engl. Transl.); (United States)(2024)10.1101/2024.03.04.583178

N/A

0DataRank · unranked

4 citations

Xinyuanyuan Sun, Vinícius M. de Oliveira, Ruibin Liu, Joseph Clayton, Haifa El Kilani +3 more