Tommi Vatanen

Also affiliated with University of Helsinki, University of Auckland, Helsinki Institute of Physics, Hochschule für Angewandte Wissenschaften Kiel, Christian-Albrechts-Universität zu Kiel, Institute for Molecular Medicine Finland

Biochemistry, Genetics and Molecular BiologyMedicineNursingAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “Structure-based protein function prediction using graph convolutional networks”.

Structure-based protein function prediction using graph convolutional networks

Nature Communications(2021)10.1038/s41467-021-23303-9

N/A

10.3DataRank · unranked

937 citations

P. Douglas Renfrew, Tomasz Kościółek, Julia Koehler Leman, Daniel Berenberg, Tommi Vatanen +9 more

Temporal development of the gut microbiome in early childhood from the TEDDY study

Nature(2018)10.1038/s41586-018-0617-x

N/A

1.1DataRank · unranked

2041 citations

Nadim J. Ajami, Jacqueline L. O’Brien, Diane S. Hutchinson, Daniel P. Smith, Matthew C. Wong +28 more

Sequence-structure-function relationships in the microbial protein universe

Nature Communications(2023)10.1038/s41467-023-37896-w

N/A

0.700DataRank · unranked

105 citations

Paweł Szczerbiak, P. Douglas Renfrew, Vladimir Gligorijević, Daniel Berenberg, Tommi Vatanen +11 more

Linking Strain Engraftment in Fecal Microbiota Transplantation With Maintenance of Remission in Crohn’s Disease

Gastroenterology(2020)10.1053/j.gastro.2020.08.045

N/A

0.637DataRank · unranked

69 citations

Jason Lloyd‐Price, Tommi Vatanen, Philippe Seksik, Laurent Beaugerie, Tabassome Simon +4 more

Associations between dietary fibers and gut microbiome composition in the EDIA longitudinal infant cohort

American Journal of Clinical Nutrition(2024)10.1016/j.ajcnut.2024.11.011

N/A

0.552DataRank · unranked

8 citations

Tuuli Ei Salo, Leena Hakola, Mikael Knip, Suvi Virtanen, Tommi Vatanen +1 more

Microbiome-derived bile acid signatures in early life and their association with islet autoimmunity

Nature Communications(2025)10.1038/s41467-025-66619-6

N/A

0.417DataRank · unranked

14 citations

Alex M. Dickens, Tanja Buchacher, Tianai Lou, Vincent Charron‐Lamoureux, Roosa Kattelus +24 more

Sequence-structure-function relationships in the microbial protein universe

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.18.484903

N/A

0.360DataRank · unranked

10 citations

Paweł Szczerbiak, P. Douglas Renfrew, Vladimir Gligorijević, Daniel Berenberg, Tommi Vatanen +11 more

Protein language models uncover carbohydrate-active enzyme function in metagenomics

BMC Bioinformatics(2025)10.1186/s12859-025-06286-y

N/A

0.241DataRank · unranked

4 citations

Ahmed M. Mohamed, Chenhao Li, Tommi Vatanen, D. B. Graham, Róisı́n M. Owens +5 more

Industrialization drives convergent microbial and physiological shifts in the human metaorganism

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.20.683358

N/A

0.241DataRank · unranked

4 citations

Malte Rühlemann, Ana Paula Schaan, Yue Ma, Lucas Moitinho‐Silva, Eike Matthias Wacker +61 more

Impact of exposure to per- and polyfluoroalkyl substances on fecal microbiota composition in mother-infant dyads

Environment International(2023)10.1016/j.envint.2023.107965

N/A

0DataRank · unranked

35 citations

Taina Härkönen, Tommi Vatanen, Tuulia Hyötyläinen, Mikael Knip, Matej Orešič +1 more

Impact of exposure to per- and polyfluoroalkyl substances on fecal microbiota composition in mother-infant dyads

medRxiv(2022)10.1101/2022.12.14.22283359

N/A

0DataRank · unranked

0 citations

Taina Härkönen, Tommi Vatanen, Tuulia Hyötyläinen, Mikael Knip, Matej Orešič +1 more