Wenpin Hou

Also affiliated with Columbia University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.459Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

CD137 agonism enhances anti-PD1 induced activation of expanded CD8+ T cell clones in a neoadjuvant pancreatic cancer clinical trial

iScience(2024)10.1016/j.isci.2024.111569

Top 41%

0.459DataRank

Top 41%15 citations

Jacob T. Mitchell, Joseph A. Tandurella, Eric S. Christenson, Ludmila Danilova, Atul Deshpande +29 more

Papers

Driven by 28 papers — median percentile 59. Top paper: “Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers”.

Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers

Nature(2021)10.1038/s41586-021-03752-4

N/A

0.948DataRank · unranked

555 citations

Jiajia Zhang, Zhicheng Ji, Ajay Vaghasia, Boyang Zhang, Emily Han-Chung Hsiue +50 more

DNA methylation mediates the effect of maternal smoking on offspring birthweight: a birth cohort study of multi-ethnic US mother–newborn pairs

Clinical Epigenetics(2021)10.1186/s13148-021-01032-6

N/A

0.655DataRank · unranked

78 citations

Xiumei Hong, Boyang Zhang, Wan‐Yu Huang, Wenpin Hou, Guoying Wang +5 more

CD137 agonism enhances anti-PD1 induced activation of expanded CD8+ T cell clones in a neoadjuvant pancreatic cancer clinical trial

iScience(2024)10.1016/j.isci.2024.111569

Top 41%

0.459DataRank

Top 41%15 citations

Jacob T. Mitchell, Joseph A. Tandurella, Eric S. Christenson, Ludmila Danilova, Atul Deshpande +29 more

Contrasting Association of Maternal Plasma Biomarkers of Smoking and 1-Carbon Micronutrients with Offspring DNA Methylation: Evidence of Aryl Hydrocarbon Receptor Repressor Gene–Smoking–Folate Interaction

Journal of Nutrition(2023)10.1016/j.tjnut.2023.05.002

N/A

0.312DataRank · unranked

7 citations

Xiumei Hong, Christine Ladd‐Acosta, Jessie P. Buckley, Giehae Choi, Guoying Wang +5 more

Unbiased visualization of single-cell genomic data with SCUBI

Cell Reports Methods(2022)10.1016/j.crmeth.2021.100135

N/A

0DataRank · unranked

12 citations

Zhicheng Ji, Wenpin Hou

Palo: spatially aware color palette optimization for single-cell and spatial data

Bioinformatics(2022)10.1093/bioinformatics/btac368

N/A

0DataRank · unranked

10 citations

Zhicheng Ji, Wenpin Hou

Decomposing spatial heterogeneity of cell trajectories with Paella

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.05.506682

N/A

0DataRank · unranked

1 citations

Zhicheng Ji, Wenpin Hou

Palo: Spatially-aware color palette optimization for single-cell and spatial data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.13.484080

N/A

0DataRank · unranked

0 citations

Zhicheng Ji, Wenpin Hou

Lung tumor-infiltrating T reg have divergent transcriptional profiles and function linked to checkpoint blockade response

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.13.520329

N/A

0DataRank · unranked

0 citations

Jiajia Zhang, Boyang Zhang, Laurene S. Cheung, Zhen Zeng, Christopher Cherry +32 more

A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples

Nature Communications(2023)10.1038/s41467-023-42841-y

N/A

0DataRank · unranked

97 citations

Zhicheng Ji, Zeyu Chen, E. John Wherry, Stephanie C. Hicks, Hongkai Ji +1 more

Lung tumor–infiltrating Treghave divergent transcriptional profiles and function linked to checkpoint blockade response

Science Immunology(2023)10.1126/sciimmunol.adg1487

N/A

0DataRank · unranked

75 citations

Jiajia Zhang, Laurene S. Cheung, Sydney Connor, Boyang Zhang, Zhen Zeng +34 more

Benchmarking large language models for genomic knowledge with GeneTuring

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.11.532238

N/A

0DataRank · unranked

42 citations

Xu Liao, Zhicheng Ji, Wenpin Hou, Xinyi Shang

Assessing GPT-4 for cell type annotation in single-cell RNA-seq analysis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.16.537094

N/A

0DataRank · unranked

38 citations

Zhicheng Ji, Wenpin Hou

Reference-free and cost-effective automated cell type annotation with GPT-4 in single-cell RNA-seq analysis

Research Square(2023)10.21203/rs.3.rs-2824971/v1

N/A

0DataRank · unranked

4 citations

Wenpin Hou, Zhicheng Ji

Assessing GPT-4 for cell type annotation in single-cell RNA-seq analysis

Nature Methods(2024)10.1038/s41592-024-02235-4

N/A

0DataRank · unranked

231 citations

Zhicheng Ji, Wenpin Hou

Comparing Large Language Models and Human Programmers for Generating Programming Code

Advanced Science(2024)10.1002/advs.202412279

N/A

0DataRank · unranked

39 citations

Zhicheng Ji, Wenpin Hou

Assessing large multimodal models for one-shot learning and interpretability in biomedical image classification

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2023.12.31.573796

N/A

0DataRank · unranked

12 citations

Yilong Qu, Huifang Ma, Zhicheng Ji, Wenpin Hou

GPT-4V exhibits human-like performance in biomedical image classification

Research Square(2024)10.21203/rs.3.rs-3826740/v1

N/A

0DataRank · unranked

1 citations

Wenpin Hou, Zhicheng Ji

Benchmarking large language models for genomic knowledge with GeneTuring

Briefings in Bioinformatics(2025)10.1093/bib/bbaf492

N/A

0DataRank · unranked

9 citations

Xu Liao, Zhicheng Ji, Wenpin Hou, Xinyi Shang

Assessing Large Multimodal Models for One‐Shot Learning and Interpretability in Biomedical Image Classification

Advanced Intelligent Systems(2025)10.1002/aisy.202400947

N/A

0DataRank · unranked

4 citations

Qi Liu, Huifang Ma, Yilong Qu, Zhicheng Ji, Wenpin Hou

Identifying cell-type-specific spatially variable genes with ctSVG

Genome biology(2025)10.1186/s13059-025-03870-6

N/A

0DataRank · unranked

1 citations

Xinyi Shang, Wenpin Hou, Zhicheng Ji, Haotian Zhuang

Comparative analysis of gene regulation in single cells using Compass

Cell Reports Methods(2025)10.1016/j.crmeth.2025.101035

N/A

0DataRank · unranked

1 citations

Yilong Qu, Zhiyou Ye, Tianbei Zhang, Hui-Fang Ma, Ming Chen +3 more

EpiFoundation: A Foundation Model for Single-Cell ATAC-seq via Peak-to-Gene Alignment

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.05.636688

N/A

0DataRank · unranked

5 citations

Changxin Wan, Zhicheng Ji, Yuyin Zhou, Wenpin Hou, Jun-Cheng Wu

A systematic evaluation of single-cell RNA-sequencing imputation methods

Genome biology(2020)10.1186/s13059-020-02132-x

N/A

0DataRank · unranked

328 citations

Zhicheng Ji, Hongkai Ji, Stephanie C. Hicks, Wenpin Hou

A New Paradigm for Genome-wide DNA Methylation Prediction Without Methylation Input

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.05.636730

N/A

0DataRank · unranked

2 citations

Qi Liu, Yifei Zhao, Xianfeng Tang, Yuyin Zhou, Wenpin Hou +1 more

Single-cell ATAC-seq signal extraction and enhancement with SCATE

Genome biology(2020)10.1186/s13059-020-02075-3

N/A

0DataRank · unranked

51 citations

Weiqiang Zhou, Wenpin Hou, Hongkai Ji, Zhicheng Ji

A Systematic Evaluation of Single-cell RNA-sequencing Imputation Methods

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.29.925974

N/A

0DataRank · unranked

31 citations

Zhicheng Ji, Hongkai Ji, Stephanie C. Hicks, Wenpin Hou

A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.10.451910

N/A

0DataRank · unranked

16 citations

Zhicheng Ji, Zeyu Chen, E. John Wherry, Stephanie C. Hicks, Hongkai Ji +1 more

Wenpin Hou

Indexed papers

Top data-sharing exemplar

Papers