🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Robert L. Jernigan

Iowa State University

ORCID: 0000-0003-0996-8360
Biochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 18 papers. Top paper: “Mixed levels of coarse-graining of large proteins using elastic network model succeeds in extracting the slowest motions”.

Mixed levels of coarse-graining of large proteins using elastic network model succeeds in extracting the slowest motions

Polymer(2004)10.1016/j.polymer.2003.10.071
N/A
0.614DataRank · unranked
59 citations

Robert L. Jernigan, Pemra Doruker, Ozge Kurkcuoglu

hdANM: a new comprehensive dynamics model for protein hinges

Biophysical Journal(2021)10.1016/j.bpj.2021.10.017
N/A
0.360DataRank · unranked
10 citations

Domenico Scaramozzino, Ambuj Kumar, Giuseppe Lacidogna, Alberto Carpinteri, Robert L. Jernigan +1 more

Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier

Bioinformatics(2022)10.1093/bioinformatics/btac159
N/A
0.269DataRank · unranked
5 citations

Pranav M. Khade, Karin S. Dorman, Robert L. Jernigan, Ambuj Kumar

Protein Fluctuations in Response to Random External Forces

Applied Sciences(2022)10.3390/app12052344
N/A
0DataRank · unranked
8 citations

Pranav M. Khade, Robert L. Jernigan, Domenico Scaramozzino

Protein Language Model Performs Efficient Homology Detection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.10.483778
N/A
0DataRank · unranked
8 citations

Kejue Jia, Robert L. Jernigan, Mesih Kilinc

New Functions Identified for HIV gp120 with the New ProtSub Sequence Matching

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.01.478707
N/A
0DataRank · unranked
0 citations

Sayane Shome, Kejue Jia, Robert L. Jernigan, Benjamin Litterer

Predicting allosteric pockets in protein biological assemblages

Bioinformatics(2023)10.1093/bioinformatics/btad275
N/A
0DataRank · unranked
28 citations

Burak Kaynak, Karin S. Dorman, Pemra Doruker, Robert L. Jernigan, Ambuj Kumar

Structure and function of LCI1: a plasma membrane CO2 channel in the Chlamydomonas CO2 concentrating mechanism

The Plant Journal(2020)10.1111/tpj.14745
N/A
0DataRank · unranked
27 citations

Tsung‐Han Chou, Abhijith Radhakrishnan, Jani Reddy Bolla, Kannan Sankar, Sayane Shome +6 more

Characterizing interactions in E-cadherin assemblages

Biophysical Journal(2023)10.1016/j.bpj.2023.06.009
N/A
0DataRank · unranked
2 citations

Kejue Jia, Sanjeevi Sivasankar, Robert L. Jernigan, Sayane Shome

JSONWP: a static website generator for protein bioinformatics research

Bioinformatics Advances(2023)10.1093/bioadv/vbad154
N/A
0DataRank · unranked
1 citations

Kejue Jia, Robert L. Jernigan, Mesih Kilinc

Tubulin CFEOM mutations both inhibit or activate kinesin motor activity

Molecular Biology of the Cell(2024)10.1091/mbc.e23-01-0020
N/A
0DataRank · unranked
2 citations

Pallavi Sinha Roy, Ambuj Kumar, I Schneider, Vladimir I. Gelfand, Robert L. Jernigan +2 more

Improving the Annotations of JCVI-Syn3a Proteins

Methods in molecular biology(2024)10.1007/978-1-0716-4196-5_9
N/A
0DataRank · unranked
1 citations

Kejue Jia, Robert L. Jernigan, Mesih Kilinc

Rapid discrimination between deleterious and benign missense mutations in the CAGI 6 experiment

Human Genomics(2024)10.1186/s40246-024-00655-z
N/A
0DataRank · unranked
0 citations

Robert L. Jernigan, Andrzej Kloczkowski, Eshel Faraggi

AlphaFold2, SPINE-X, and Seder on Four Hard CASP Targets

Methods in molecular biology(2024)10.1007/978-1-0716-4196-5_8
N/A
0DataRank · unranked
0 citations

Robert L. Jernigan, Andrzej Kloczkowski, Eshel Faraggi

Major advances in protein function assignment by remote homolog detection with protein language models – A review

Current Opinion in Structural Biology(2025)10.1016/j.sbi.2025.102984
N/A
0DataRank · unranked
12 citations

Kejue Jia, Robert L. Jernigan, Mesih Kilinc

New alignment method for remote protein sequences by the direct use of pairwise sequence correlations and substitutions

Frontiers in Bioinformatics(2023)10.3389/fbinf.2023.1227193
N/A
0DataRank · unranked
3 citations

Mesih Kilinc, Robert L. Jernigan, Kejue Jia

Ligand Binding Introduces Significant Allosteric Shifts in the Locations of Protein Fluctuations

Frontiers in Molecular Biosciences(2021)10.3389/fmolb.2021.733148
N/A
0DataRank · unranked
17 citations

Robert L. Jernigan, Ambuj Kumar

Computational Ways to Enhance Protein Inhibitor Design

Frontiers in Molecular Biosciences(2021)10.3389/fmolb.2020.607323
N/A
0DataRank · unranked
2 citations

Kannan Sankar, Kejue Jia, Eshel Faraggi, Andrzej Kloczkowski, Robert L. Jernigan