M. Patrick Griffith

Also affiliated with Center for Genomic Science

Agricultural and Biological SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Outbreak of Pseudomonas aeruginosa Infections from a Contaminated Gastroscope Detected by Whole Genome Sequencing Surveillance”.

Outbreak of Pseudomonas aeruginosa Infections from a Contaminated Gastroscope Detected by Whole Genome Sequencing Surveillance

Clinical Infectious Diseases(2020)10.1093/cid/ciaa1887

N/A

0.584DataRank · unranked

48 citations

Jieshi Chen, James Miller, Melissa Saul, Kathleen A. Shutt, M. Patrick Griffith +14 more

Prolonged bacterial carriage and hospital transmission detected by whole genome sequencing surveillance

Antimicrobial Stewardship & Healthcare Epidemiology(2024)10.1017/ash.2024.4

N/A

0.229DataRank · unranked

3 citations

M. Patrick Griffith, Vatsala Rangachar Srinivasa, Kady Waggle, Graham M. Snyder, Daria Van Tyne +3 more

Artificial intelligence enhances genomic surveillance in healthcare outbreak investigations

Infection Control and Hospital Epidemiology(2025)10.1017/ice.2025.10355

N/A

0.165DataRank · unranked

2 citations

Jieshi Chen, Melissa Saul, Kathleen A. Shutt, M. Patrick Griffith, Graham M. Snyder +4 more

Carbapenem-Resistant Acinetobacter baumannii in U.S. Hospitals: Diversification of Circulating Lineages and Antimicrobial Resistance

mBio(2022)10.1128/mbio.02759-21

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0DataRank · unranked

98 citations

Mustapha M. Mustapha, M. Patrick Griffith, Lauren Komarow, Courtney Luterbach, Daniel R. Evans +14 more

Convergent Evolution of Antibiotic Tolerance in Patients with Persistent Methicillin-Resistant Staphylococcus aureus Bacteremia

Infection and Immunity(2022)10.1128/iai.00001-22

N/A

0DataRank · unranked

26 citations

Edwin Chen, Marla G. Shaffer, Vatsala Rangachar Srinivasa, M. Patrick Griffith, Mustapha M. Mustapha +4 more

Two Artificial Tears Outbreak-Associated Cases of Extensively Drug-Resistant Pseudomonas aeruginosa Detected Through Whole Genome Sequencing–Based Surveillance

The Journal of Infectious Diseases(2023)10.1093/infdis/jiad318

N/A

0DataRank · unranked

27 citations

Vatsala Rangachar Srinivasa, Emma G. Mills, M. Patrick Griffith, Kady Waggle, Ashley Ayres +5 more

Empirically derived sequence similarity thresholds to study the genomic epidemiology of plasmids shared among healthcare-associated bacterial pathogens

EBioMedicine(2023)10.1016/j.ebiom.2023.104681

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0DataRank · unranked

17 citations

Alexander Sundermann, M. Patrick Griffith, Vatsala Rangachar Srinivasa, Mustapha M. Mustapha, Jieshi Chen +5 more

Impact ofompk36genotype and KPC subtype on thein vitroactivity of ceftazidime/avibactam, imipenem/relebactam and meropenem/vaborbactam against KPC-producingK. pneumoniaeclinical isolates

JAC-Antimicrobial Resistance(2023)10.1093/jacamr/dlad022

N/A

0DataRank · unranked

16 citations

Ellen G Kline, M. Patrick Griffith, Chelsea E Jones, Abigail M Rubio, Kevin M Squires +2 more

Mutations in ompK36 differentially impact in vitro synergy of meropenem/vaborbactam and ceftazidime/avibactam in combination with other antibiotics against KPC-producing Klebsiella pneumoniae

JAC-Antimicrobial Resistance(2023)10.1093/jacamr/dlad113

N/A

0DataRank · unranked

10 citations

Ellen G Kline, M. Patrick Griffith, Chelsea E Jones, Abigail M Rubio, Kevin M Squires +2 more

Environmental contamination of postmortem blood cultures detected by whole-genome sequencing surveillance

Infection Control and Hospital Epidemiology(2023)10.1017/ice.2023.192

N/A

0DataRank · unranked

1 citations

M. Patrick Griffith, Vatsala Rangachar Srinivasa, Deena Ereifej, Kady Waggle, Daria Van Tyne +6 more

In vivo evolution of a Klebsiella pneumoniae capsule defect promotes complement-mediated opsono-phagocytosis and persistence during recurrent infection

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.31.542722

N/A

0DataRank · unranked

5 citations

Brian Ahn, Hernán F. Peñaloza, Christi L. McElheny, Nathanial J. Tolman, Rick van der Geest +24 more

Two artificial tears outbreak-associated cases of XDR Pseudomonas aeruginosa detected through whole genome sequencing-based surveillance

medRxiv(2023)10.1101/2023.04.11.23288417

N/A

0DataRank · unranked

4 citations

Vatsala Rangachar Srinivasa, Emma G. Mills, M. Patrick Griffith, Kady Waggle, Ashley Ayres +5 more

Genomic Epidemiologic Investigation of a Multispecies Hospital Outbreak of NDM-5-Producing Enterobacterales Infections

medRxiv(2023)10.1101/2023.08.31.23294545

N/A

0DataRank · unranked

2 citations

Abby L. Valek, M. Patrick Griffith, Emma G. Mills, Kady Waggle, Vatsala Rangachar Srinivasa +9 more

Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.11.571174

N/A

0DataRank · unranked

0 citations

Emma G. Mills, M. Patrick Griffith, Hayley R. Nordstrom, Christi L. McElheny, Lee H. Harrison +3 more

Frequency of cefiderocol heteroresistance among patients treated with cefiderocol for carbapenem-resistant Acinetobacter baumannii infections

JAC-Antimicrobial Resistance(2024)10.1093/jacamr/dlae146

N/A

0DataRank · unranked

31 citations

Ava J Dorazio, Giusy Tiseo, Kevin M Squires, Alessandro Leonildi, Cesira Giordano +8 more

Real-time genomic epidemiologic investigation of a multispecies plasmid-associated hospital outbreak of NDM-5-producing Enterobacterales infections

International Journal of Infectious Diseases(2024)10.1016/j.ijid.2024.02.014

N/A

0DataRank · unranked

21 citations

Abby L. Valek, M. Patrick Griffith, Emma G. Mills, Kady Waggle, Vatsala Rangachar Srinivasa +9 more

In Vivo Evolution of a Klebsiella pneumoniae Capsule Defect With wcaJ Mutation Promotes Complement-Mediated Opsonophagocytosis During Recurrent Infection

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae003

N/A

0DataRank · unranked

16 citations

Brian Ahn, Hernán F. Peñaloza, Christi L. McElheny, Nathanial J. Tolman, Rick van der Geest +24 more

Impact of discontinuation of contact precautions on surveillance- and whole genome sequencing-defined methicillin-resistant Staphylococcus aureus healthcare-associated infections

Antimicrobial Stewardship & Healthcare Epidemiology(2024)10.1017/ash.2024.89

N/A

0DataRank · unranked

8 citations

Lora Pless, Ashley M. Ayres, Carl Ciccone, Joseph Penzelik, Alexander Sundermann +7 more

Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years

Scientific Reports(2024)10.1038/s41598-024-70540-1

N/A

0DataRank · unranked

7 citations

Emma G. Mills, M. Patrick Griffith, Hayley R. Nordstrom, Christi L. McElheny, Lee H. Harrison +3 more

Bacteriocin production facilitates nosocomial emergence of vancomycin-resistant Enterococcus faecium

medRxiv(2024)10.1101/2024.08.01.24311290

N/A

0DataRank · unranked

3 citations

Alexander B. Smith, M. Patrick Griffith, Katharine Hewlett, Lora Pless, Alexander Sundermann +4 more

Real-Time Genomic Surveillance for Enhanced Healthcare Outbreak Detection and Control: Clinical and Economic Impact

Clinical Infectious Diseases(2025)10.1093/cid/ciaf216

N/A

0DataRank · unranked

28 citations

Praveen Kumar, M. Patrick Griffith, Kady Waggle, Vatsala Rangachar Srinivasa, Nathan J. Raabe +11 more

Genomic sequencing surveillance of patients colonized with vancomycin-resistant enterococci improves detection of healthcare-associated transmission

BMC Global and Public Health(2025)10.1186/s44263-025-00186-2

N/A

0DataRank · unranked

6 citations

Vatsala Rangachar Srinivasa, Emma G. Mills, M. Patrick Griffith, Eric Evans, Jieshi Chen +6 more

Comparative in vitro activity of sulbactam with avibactam or durlobactam against carbapenem-resistant Acinetobacter baumannii

JAC-Antimicrobial Resistance(2025)10.1093/jacamr/dlaf098

N/A

0DataRank · unranked

4 citations

Ellen G Kline, Kevin M Squires, M. Patrick Griffith, Yohei Doi, Ryan K. Shields +1 more

Enhanced discrimination of Clostridioides difficile transmission using whole-genome sequencing and in silico multi-locus variable number tandem repeat analysis

Microbiology Spectrum(2025)10.1128/spectrum.03287-24

N/A

0DataRank · unranked

2 citations

Emma G. Mills, Vatsala Rangachar Srinivasa, M. Patrick Griffith, Deena Ereifej, Kady Waggle +6 more

Genomic Epidemiology of Healthcare-Associated Respiratory Virus Infections

Antimicrobial Stewardship & Healthcare Epidemiology(2025)10.1017/ash.2025.231

N/A

0DataRank · unranked

1 citations

M. Patrick Griffith, Alexander Sundermann, Emma G. Mills, Nathan J. Raabe, Kady Waggle +8 more

Emergence and Epidemiology of Dominant Variants of Human Metapneumovirus in the United States between 2016 and 2021

medRxiv(2025)10.1101/2025.08.31.25334797

N/A

0DataRank · unranked

2 citations

Lambodhar Damodaran, Ray Pomponio, Rose Patrick, M. Patrick Griffith, Sara Walters +11 more

Healthcare-associated cluster of Burkholderia sola in two lung transplant recipients characterized through whole-genome sequencing

Infection Control and Hospital Epidemiology(2025)10.1017/ice.2025.10261

N/A

0DataRank · unranked

0 citations

M. Patrick Griffith, Deena Ereifej, Nathan J. Raabe, Vatsala Rangachar Srinivasa, Kady Waggle +9 more

Clinical and Genomic Epidemiology of Carbapenem-Nonsusceptible Citrobacter spp. at a Tertiary Health Care Center over 2 Decades

Journal of Clinical Microbiology(2020)10.1128/jcm.00275-20

N/A

0DataRank · unranked

34 citations

Daniel R. Evans, M. Patrick Griffith, Christi L. McElheny, Mohamed Hassan, Lloyd Clarke +6 more

Whole-Genome Sequencing Surveillance and Machine Learning of the Electronic Health Record for Enhanced Healthcare Outbreak Detection

Clinical Infectious Diseases(2021)10.1093/cid/ciab946

N/A

0DataRank · unranked

133 citations

Jieshi Chen, Praveen Kumar, Ashley Ayres, Shu‐Ting Cho, Chinelo Ezeonwuka +17 more