🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Katja Koeppen

Boehringer Ingelheim (Brazil)

ORCID: 0000-0003-1094-0621

Also affiliated with Boehringer Ingelheim (France), Boehringer Ingelheim (Spain)

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.830Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

mSystems(2021)10.1128/msystems.01305-20
Top 42%
0.446DataRank
Top 42%18 citations

Katja Koeppen, Victoria Holden, Samuel L. Neff, Liviu Cengher, Elora G. Demers +4 more

Papers

Driven by 17 papers — median percentile 55. Top paper: “Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of P. aeruginosa”.

Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of P. aeruginosa

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2105370118
N/A
0.621DataRank · unranked
62 citations

Amanda Nymon, BRUCE A. STANTON, Laura Bashor, Zhongyou Li, Thomas H. Hampton +8 more

Systemic Sclerosis Dermal Fibroblast Exosomes Trigger Type 1 Interferon Responses in Keratinocytes via a TBK / JAK / STAT Signaling Axis

Arthritis & Rheumatology(2025)10.1002/art.43029
N/A
0.564DataRank · unranked
17 citations

Christopher W. Wasson, Katja Koeppen, Francesca Chandler, Leon F. Willis, Stefano Di Donato +5 more

Conditional antagonism in co-cultures of Pseudomonas aeruginosa and Candida albicans: An intersection of ethanol and phosphate signaling distilled from dual-seq transcriptomics

PLoS Genetics(2020)10.1371/journal.pgen.1008783
N/A
0.550DataRank · unranked
38 citations

Katja Koeppen, Patricia Occipinti, Colleen E. Harty, Deborah A. Hogan, Georgia Doing

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

mSystems(2021)10.1128/msystems.01305-20
Top 42%
0.446DataRank
Top 42%18 citations

Katja Koeppen, Victoria Holden, Samuel L. Neff, Liviu Cengher, Elora G. Demers +4 more

P. aeruginosa tRNA-fMet halves secreted in outer membrane vesicles suppress lung inflammation in cystic fibrosis

American Journal of Physiology-Lung Cellular and Molecular Physiology(2024)10.1152/ajplung.00018.2024
N/A
0.437DataRank · unranked
13 citations

BRUCE A. STANTON, Amanda Nymon, Carolyn Roche, Katja Koeppen, Alix Ashare +5 more

CF monocyte-derived macrophages have an attenuated response to extracellular vesicles secreted by airway epithelial cells

American Journal of Physiology-Lung Cellular and Molecular Physiology(2021)10.1152/ajplung.00621.2020
N/A
0.434DataRank · unranked
17 citations

Amanda Nymon, BRUCE A. STANTON, Zhongyou Li, Thomas H. Hampton, Alix Ashare +1 more

CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies

Scientific Data(2022)10.1038/s41597-022-01431-1
Top 47%
0.385DataRank
Top 47%12 citations

Thomas H. Hampton, Charles Puerner, Liviu Cengher, Georgia Doing, Alexandra J. Lee +6 more

Rocket-miR, a translational launchpad for miRNA-based antimicrobial drug development

mSystems(2023)10.1128/msystems.00653-23
N/A
0.345DataRank · unranked
9 citations

Thomas H. Hampton, Katja Koeppen, Sharanya Sarkar, Casey J. Latario, Benjamin D. Ross +2 more

Conditional antagonism in co-cultures of Pseudomonas aeruginosa and Candida albicans : an intersection of ethanol and phosphate signaling distilled from dual-seq transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.20.050765
N/A
0.292DataRank · unranked
6 citations

Katja Koeppen, Patricia Occipinti, Deborah A. Hogan, Georgia Doing

An rRNA fragment in extracellular vesicles secreted by human airway epithelial cells increases the fluoroquinolone sensitivity of P. aeruginosa

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.19.488721
N/A
0.104DataRank · unranked
1 citations

Thomas H. Hampton, Scott A. Gerber, Young Ah Goo, Byoung-Kyu Cho, Danielle M. Vermilyea +3 more

Rocket-miR, a Translational Launchpad for miRNA-based Antimicrobial Drug Development

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.22.546111
N/A
0.104DataRank · unranked
1 citations

Thomas H. Hampton, Katja Koeppen, Sharanya Sarkar, Casey J. Latario, Benjamin D. Ross +2 more

Tobramycin-induced secretion of P. aeruginosa 5′ tRNA-fMet halves suppresses lung inflammation via AGO2 gene silencing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.23.461540
N/A
0.104DataRank · unranked
1 citations

Katja Koeppen, Alix Ashare, Deborah A. Hogan, Scott A. Gerber, BRUCE A. STANTON +1 more

77 Rocket-miR, a translational launchpad for miRNA-based antimicrobial drug development

Journal of Cystic Fibrosis(2023)10.1016/s1569-1993(23)01012-3
N/A
0DataRank · unranked
0 citations

Thomas H. Hampton, Katja Koeppen, Sudipta Sarkar, Casey J. Latario, Brian D. Ross +2 more

The Candida albicans Cdk8-dependent phosphoproteome reveals repression of hyphal growth through a Flo8-dependent pathway

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.10.447844
N/A
0DataRank · unranked
0 citations

Zhongle Liu, Scott Rusin, Nicole P. Jenkins, Allia K. Smith, Katja Koeppen +4 more

GLI3 Is Required for M2 Macrophage Polarization and M2-Mediated Waldenström Macroglobulinemia Growth and Survival

International Journal of Molecular Sciences(2024)10.3390/ijms252313120
N/A
0DataRank · unranked
2 citations

Mohammad Raad, Kailey E. Paar, Stephan J. Matissek, Cameron E Banks, Allison L. Carl +6 more

P. aeruginosa tRNA-fMet halves secreted in outer membrane vesicles suppress lung inflammation in Cystic Fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.03.578737
N/A
0DataRank · unranked
0 citations

BRUCE A. STANTON, Amanda Nymon, Carolyn Roche, Katja Koeppen, Alix Ashare +5 more

79 Tobramycin-induced secretion of Pseudomonas aeruginosa 5′ tRNA-fMet halves in outer membrane vesicles suppresses lung inflammation via AGO2-mediated gene silencing

Journal of Cystic Fibrosis(2023)10.1016/s1569-1993(23)01014-7
N/A
0DataRank · unranked
0 citations

Katja Koeppen, BRUCE A. STANTON, Alix Ashare, Deborah A. Hogan, Scott A. Gerber +1 more