🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Yanay Rosen

Stanford University

ORCID: 0000-0003-1129-9645
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
12.4Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Next-generation characterization of the Cancer Cell Line Encyclopedia

Nature(2019)10.1038/s41586-019-1186-3
Top 3%
6.8DataRank
Top 3%3735 citations

Franklin W. Huang, Gregory V. Kryukov, E. Robert McDonald, Jordi Barretina, Ellen T. Gelfand +68 more

Papers

Driven by 9 papers — median percentile 97. Top paper: “Next-generation characterization of the Cancer Cell Line Encyclopedia”.

Next-generation characterization of the Cancer Cell Line Encyclopedia

Nature(2019)10.1038/s41586-019-1186-3
Top 3%
6.8DataRank
Top 3%3735 citations

Franklin W. Huang, Gregory V. Kryukov, E. Robert McDonald, Jordi Barretina, Ellen T. Gelfand +68 more

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1
Top 4%
5.6DataRank
Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/761429
N/A
2.5DataRank · unranked
68 citations

Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro, Indresh Singh +44 more

How to build the virtual cell with artificial intelligence: Priorities and opportunities

Cell(2024)10.1016/j.cell.2024.11.015
N/A
0.861DataRank · unranked
310 citations

Yusuf Roohani, Yanay Rosen, Ankit Gupta, Xikun Zhang, Marcel Roed +37 more

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq

Nature Methods(2020)10.1038/s41592-020-0905-x
N/A
0.837DataRank · unranked
264 citations

Joshua Gould, Yiming Yang, Siranush Sarkizova, Marcin Tabaka, Orr Ashenberg +9 more

Universal Cell Embeddings: A Foundation Model for Cell Biology

10.1101/2023.11.28.568918
N/A
0.765DataRank · unranked
163 citations

Yusuf Roohani, Ayush Agrawal, Leon Samotorcan, Stephen R. Quake, Jure Leskovec +1 more

Toward universal cell embeddings: integrating single-cell RNA-seq datasets across species with SATURN

Nature Methods(2024)10.1038/s41592-024-02191-z
N/A
0.708DataRank · unranked
111 citations

Maria Brbić, Yusuf Roohani, Kyle Swanson, Ziang Li, Jure Leskovec +1 more

Towards Universal Cell Embeddings: Integrating Single-cell RNA-seq Datasets across Species with SATURN

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.03.526939
N/A
0.470DataRank · unranked
22 citations

Maria Brbić, Yusuf Roohani, Kyle Swanson, Ziang Li, Jure Leskovec +1 more

PhyloVision : Interactive Software for Integrated Analysis of Single-Cell Transcriptomic and Phylogenetic Data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.13.460142
N/A
0DataRank · unranked
1 citations

Yanay Rosen, Nir Yosef, Matthew G. Jones