Clarence Yapp

Also affiliated with Center for Systems Biology

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyNursing

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Supplementary Table from The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

(2023)10.1158/2159-8290.22541281

Top 100%

0DataRank

Top 100%0 citations

Zoltan Maliga, Tuulia Vallius, Brian Quattrochi, Alyce A. Chen, Connor A. Jacobson +9 more

Papers

Driven by 25 papers — median percentile 0. Top paper: “Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer”.

Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer

Cell(2023)10.1016/j.cell.2022.12.028

N/A

7.0DataRank · unranked

290 citations

Shu Wang, Shannon Coy, Yu‐An Chen, Clarence Yapp, Madison Tyler +6 more

MITI minimum information guidelines for highly multiplexed tissue images

Nature Methods(2022)10.1038/s41592-022-01415-4

N/A

1.7DataRank · unranked

88 citations

Clarence Yapp, Artem Sokolov, Sheila M. Reynolds, Yu-An Chen, Damir Sudar +95 more

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

Nature Methods(2021)10.1038/s41592-021-01308-y

N/A

0.827DataRank · unranked

247 citations

Artem Sokolov, Clarence Yapp, Yu‐An Chen, Jeremy L. Muhlich, Joshua M. Hess +22 more

Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies

Science(2022)10.1126/science.abo1984

N/A

0.818DataRank · unranked

233 citations

Eric L. Lindberg, Henrike Maatz, Antonio M. A. Miranda, Anissa Viveiros, Nikolay Shvetsov +50 more

The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

Cancer Discovery(2022)10.1158/2159-8290.cd-21-1357

N/A

0.810DataRank · unranked

220 citations

Zoltan Maliga, Tuulia Vallius, Brian Quattrochi, Alyce A. Chen, Connor A. Jacobson +9 more

Stitching and registering highly multiplexed whole-slide images of tissues and tumors using ASHLAR

Bioinformatics(2022)10.1093/bioinformatics/btac544

N/A

0.739DataRank · unranked

137 citations

Yu‐An Chen, Clarence Yapp, Douglas Russell, Sandro Santagata, Peter K. Sorger +1 more

Single cell spatial analysis reveals the topology of immunomodulatory purinergic signaling in glioblastoma

Nature Communications(2022)10.1038/s41467-022-32430-w

N/A

0.675DataRank · unranked

89 citations

Shu Wang, Sylwia A. Stopka, Jia‐Ren Lin, Clarence Yapp, Cecily C. Ritch +18 more

Age-dependent regulation of SARS-CoV-2 cell entry genes and cell death programs correlates with COVID-19 severity

Science Advances(2021)10.1126/sciadv.abf8609

N/A

0.637DataRank · unranked

69 citations

Ben A. Croker, Clarence Yapp, Gaurav N. Joshi, Johan Spetz, Cameron Fraser +26 more

UnMICST: Deep learning with real augmentation for robust segmentation of highly multiplexed images of human tissues

Communications Biology(2022)10.1038/s42003-022-04076-3

N/A

0.596DataRank · unranked

52 citations

Edward Novikov, Won-Dong Jang, Tuulia Vallius, Yuan Chen, Marcelo Cicconet +7 more

MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435473

N/A

0.568DataRank · unranked

43 citations

Artem Sokolov, Clarence Yapp, Jeremy L. Muhlich, Joshua M. Hess, Jia‐Ren Lin +16 more

Multiplexed and reproducible high content screening of live and fixed cells using Dye Drop

Nature Communications(2022)10.1038/s41467-022-34536-7

N/A

0.520DataRank · unranked

31 citations

Kartik Subramanian, Marc Hafner, Mario Niepel, Luca Gerosa, Mirra Chung +7 more

Multiplexed 3D atlas of state transitions and immune interactions in colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.31.437984

N/A

0.510DataRank · unranked

29 citations

Shu Wang, Shannon Coy, Yu‐An Chen, Clarence Yapp, Madison Tyler +6 more

The spatial landscape of progression and immunoediting in primary melanoma at single cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.23.445310

N/A

0.464DataRank · unranked

21 citations

Zoltan Maliga, Tuulia Vallius, Brian Quattrochi, Alyce A. Chen, Connor A. Jacobson +9 more

UnMICST: Deep learning with real augmentation for robust segmentation of highly multiplexed images of human tissues

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.02.438285

N/A

0.345DataRank · unranked

9 citations

Edward Novikov, Won-Dong Jang, Tuulia Vallius, Yu‐An Chen, Marcelo Cicconet +7 more

Cell Spotter (CSPOT): A machine-learning approach to automated cell spotting and quantification of highly multiplexed tissue images

10.1101/2023.11.15.567196

N/A

0.330DataRank · unranked

8 citations

Clarence Yapp, Sandro Santagata, Peter K. Sorger, Ajit J. Nirmal

Single Cell Spatial Analysis Reveals the Topology of Immunomodulatory Purinergic Signaling in Glioblastoma

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.12.475925

N/A

0.292DataRank · unranked

6 citations

Shu Wang, Sylwia A. Stopka, Jia‐Ren Lin, Rumana Rashid, Clarence Yapp +12 more

Multiplexed and reproducible high content screening of live and fixed cells using the Dye Drop method

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.27.457854

N/A

0.269DataRank · unranked

5 citations

Kartik Subramanian, Marc Hafner, Mario Niepel, Luca Gerosa, Mirra Chung +7 more

Addressing persistent challenges in digital image analysis of cancerous tissues

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.21.548450

N/A

0DataRank · unranked

5 citations

Clarence Yapp, Gregory J. Baker, Johanna Beyer, Young Hwan Chang, Allison Creason +13 more

Data from The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

(2023)10.1158/2159-8290.c.6549601

N/A

0DataRank · unranked

0 citations

Zoltan Maliga, Tuulia Vallius, Brian Quattrochi, Alyce A. Chen, Connor A. Jacobson +9 more

Supplementary Table from The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

(2023)10.1158/2159-8290.22541281

Top 100%

0DataRank

Top 100%0 citations

Zoltan Maliga, Tuulia Vallius, Brian Quattrochi, Alyce A. Chen, Connor A. Jacobson +9 more

3D Tissue Cyclic Immunofluorescence (3D CyCIF) v1

(2024)10.17504/protocols.io.261ge59m7g47/v1

N/A

0DataRank · unranked

0 citations

Ajit J. Nirmal, Felix Y. Zhou, Zoltan Maliga, Juliann B. Tefft, Paula Montero Llopis +6 more

Exploring endothelial cell environments across organs in spatially resolved omics data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.23.678129

N/A

0DataRank · unranked

3 citations

Jodie Jepson, Roy Chen, Elizabeth Maier, Bruce W. Herr, Aleix Puig-Barbe +24 more

Addressing persistent challenges in digital image analysis of cancer tissue: resources developed from a hackathon

Molecular Oncology(2025)10.1002/1878-0261.13783

N/A

0DataRank · unranked

0 citations

Clarence Yapp, Gregory J. Baker, Johanna Beyer, Young Hwan Chang, Allison Creason +12 more

Vitessce Link: A Mixed Reality and 2D Display Hybrid Approach for Visual Analysis of 3D Tissue Maps

arXiv (Cornell University)(2025)10.48550/arxiv.2511.04262

N/A

0DataRank · unranked

0 citations

Morgan L. Turner, Cydney Nielsen, Xianhao Carton Liu, Mark S. Keller, Lisa Choy +12 more

UnMICST: Deep learning with real augmentation for robust segmentation of highly multiplexed images of human tissues

Research Square(2021)10.21203/rs.3.rs-501324/v1

N/A

0DataRank · unranked

11 citations

Edward Novikov, Won-Dong Jang, Yu-An Chen, Marcelo Cicconet, Zoltan Maliga +6 more

Clarence Yapp

Indexed papers

Top data-sharing exemplar

Papers