Paul J. Utz

Also affiliated with Institute of Infection and Immunity, Stanford University

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.5Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Expression-based Pathway Signature Analysis (EPSA): Mining publicly available microarray data for insight into human disease

BMC Medical Genomics(2008)10.1186/1755-8794-1-51

Top 10%

2.1DataRank

Top 10%17 citations

Michael G. Walker, Paul J. Utz, Atul Janardhan Butte, Jessica D. Tenenbaum

Papers

Driven by 63 papers — median percentile 73. Top paper: “New-onset IgG autoantibodies in hospitalized patients with COVID-19”.

New-onset IgG autoantibodies in hospitalized patients with COVID-19

Nature Communications(2021)10.1038/s41467-021-25509-3

N/A

9.7DataRank · unranked

474 citations

Allan Feng, Wenzhao Meng, Sokratis A. Apostolidis, Elisabeth Mack, Maja Artandi +44 more

Notch signalling drives synovial fibroblast identity and arthritis pathology

Nature(2020)10.1038/s41586-020-2222-z

N/A

9.3DataRank · unranked

544 citations

Ilya Korsunsky, Jennifer L. Marshall, Anqi Gao, Gerald F. Watts, Triin Major +70 more

KIR + CD8 + T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19

Science(2022)10.1126/science.abi9591

N/A

7.1DataRank · unranked

250 citations

Maxim Zaslavsky, Yapeng Su, Jing Guo, Michael J. Sikora, Vincent van Unen +31 more

MULTIPLEXED PROTEIN ARRAY PLATFORMS FOR ANALYSIS OF AUTOIMMUNE DISEASES

Annual Review of Immunology(2006)10.1146/annurev.immunol.24.021605.090709

N/A

5.1DataRank · unranked

108 citations

Steven M. Chan, Michael Kattah, Jessica D. Tenenbaum, Atul Janardhan Butte, Paul J. Utz +2 more

The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination

Cell(2021)10.1016/j.cell.2021.05.039

N/A

4.1DataRank · unranked

285 citations

Michele Donato, Alex Kuo, Tal Ashuach, Shakti Gupta, Chunfeng Li +18 more

Expression-based Pathway Signature Analysis (EPSA): Mining publicly available microarray data for insight into human disease

BMC Medical Genomics(2008)10.1186/1755-8794-1-51

Top 10%

2.1DataRank

Top 10%17 citations

Michael G. Walker, Paul J. Utz, Atul Janardhan Butte, Jessica D. Tenenbaum

Multi-omics analysis of mucosal and systemic immunity to SARS-CoV-2 after birth

Cell(2023)10.1016/j.cell.2023.08.044

N/A

1.9DataRank · unranked

69 citations

Allison R Burrell, Yupeng Feng, Hong Zheng, Prabhu S. Arunachalam, Mengyun Hu +30 more

Granzyme K activates the entire complement cascade

Nature(2025)10.1038/s41586-025-08713-9

N/A

1.5DataRank · unranked

118 citations

Erin Theisen, Fan Zhang, Aparna Nathan, Madison L. Fairfield, Karishma Vijay Rupani +89 more

Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium

Nature Communications(2024)10.1038/s41467-024-49186-0

N/A

1.1DataRank · unranked

56 citations

Aaron B. Wagner, Nida Meednu, Ruoqiao Huiyi Wang, Fan Zhang, Jabea Cyril Ekabe +84 more

Adipocyte associated glucocorticoid signaling regulates normal fibroblast function which is lost in inflammatory arthritis

Nature Communications(2024)10.1038/s41467-024-52586-x

N/A

1.1DataRank · unranked

18 citations

Tan‐Yun Cheng, Ilya Korsunsky, Gerald F. Watts, Shani T. Gal-Oz, William V. Trim +94 more

Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles

Nature Genetics(2024)10.1038/s41588-024-01682-1

N/A

0.972DataRank · unranked

52 citations

Kathryn Weinand, Shakson Isaac, Kushal K. Dey, Karthik A. Jagadeesh, Masahiro Kanai +86 more

Systems vaccinology of the BNT162b2 mRNA vaccine in humans

Nature(2021)10.1038/s41586-021-03791-x

N/A

0.956DataRank · unranked

586 citations

Madeleine Scott, Thomas Hagan, Chunfeng Li, Yupeng Feng, Florian Wimmers +33 more

High incidence of proliferative and membranous nephritis in SLE patients with low proteinuria in the Accelerating Medicines Partnership

Lara D. Veeken(2022)10.1093/rheumatology/keac067

N/A

0.921DataRank · unranked

32 citations

Jessica Li, Andrea Fava, Kristina Deonaraine, David Wofsy, Judith A. James +95 more

Characterising the autoantibody repertoire in systemic sclerosis following myeloablative haematopoietic stem cell transplantation

Annals of the Rheumatic Diseases(2023)10.1136/ard-2021-221926

N/A

0.795DataRank · unranked

22 citations

Michele Donato, Daniel E. Furst, Leslie J. Crofford, Ellen Goldmuntz, Lynette Keyes-Elstein +13 more

Unveiling the autoreactome: Proteome-wide immunological fingerprints reveal the promise of plasma cell depleting therapy

medRxiv(2023)10.1101/2023.12.19.23300188

N/A

0.637DataRank · unranked

7 citations

David Yu, Alysa Rallistan, Müge Kalaycıoğlu, Jim Boonyaratanakornkit, Damian J. Green +28 more

Synovial fibroblast gene expression is associated with sensory nerve growth and pain in rheumatoid arthritis

Science Translational Medicine(2024)10.1126/scitranslmed.adk3506

N/A

0.635DataRank · unranked

68 citations

Nicholas Bartelo, Maryam Aslam, Elisabeth A. Murphy, Caryn Hale, Nathalie E. Blachère +69 more

Impact of air pollution exposure on cytokines and histone modification profiles at single-cell levels during pregnancy

Science Advances(2024)10.1126/sciadv.adp5227

N/A

0.628DataRank · unranked

22 citations

Juan Aguilera, Abhinav Kaushik, J Ha, Stuart Cansdale, Emily Yu-Ann Yang +17 more

T cell help shapes B cell tolerance

Science Immunology(2024)10.1126/sciimmunol.adj7029

N/A

0.612DataRank · unranked

18 citations

Xihui Yin, Tyler R. Prestwood, Minghe Ma, Paul J. Utz, Michael C. Carroll +1 more

Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution

Nature Genetics(2023)10.1038/s41588-023-01586-6

N/A

0.571DataRank · unranked

44 citations

Amber Shen, Saisriram Gurajala, Aparna Nathan, Laurie Rumker, Vitor R. C. Aguiar +95 more

The chromatin landscape of pathogenic transcriptional cell states in rheumatoid arthritis

Nature Communications(2024)10.1038/s41467-024-48620-7

N/A

0.553DataRank · unranked

39 citations

Saori Sakaue, Aparna Nathan, A. Helena Jonsson, Fan Zhang, Gerald F. Watts +82 more

Impaired innate and adaptive immune responses to BNT162b2 SARS-CoV-2 vaccination in systemic lupus erythematosus

JCI Insight(2024)10.1172/jci.insight.176556

N/A

0.532DataRank · unranked

14 citations

Hong Zheng, Yashaar Chaichian, Prabhu S. Arunachalam, Gayathri Swaminathan, Alec Eschholz +17 more

Increases in ambient air pollutants during pregnancy are linked to increases in methylation of IL4, IL10, and IFNγ

Clinical Epigenetics(2022)10.1186/s13148-022-01254-2

N/A

0.529DataRank · unranked

33 citations

Xiaorui Han, Shu Cao, John R. Balmes, Fred Lurmann, Tim Tyner +12 more

Cellular deconstruction of inflamed synovium defines diverse inflammatory phenotypes in rheumatoid arthritis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.25.481990

N/A

0.515DataRank · unranked

30 citations

A. Helena Jonsson, Aparna Nathan, Kevin Wei, Nghia Millard, Qian Xiao +80 more

Autoantibodies are highly prevalent in non–SARS-CoV-2 respiratory infections and critical illness

JCI Insight(2023)10.1172/jci.insight.163150

N/A

0.505DataRank · unranked

28 citations

Emily Yu-Ann Yang, A. R. Moore, Shaurya Dhingra, Sarah E. Chang, Xihui Yin +38 more

Complement C4A Regulates Autoreactive B Cells in Murine Lupus

Cell Reports(2020)10.1016/j.celrep.2020.108330

N/A

0.500DataRank · unranked

27 citations

Jessy Présumey, Cees E. van der Poel, Carlos Castrillón, Sarah E. Chang, Paul J. Utz +2 more

Disease diagnostics using machine learning of immune receptors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.26.489314

N/A

0.449DataRank · unranked

19 citations

Erin Craig, Jackson Michuda, Nidhi Sehgal, Nikhil Ram-Mohan, Ji-Yeun Lee +31 more

Long COVID trajectories in the prospectively followed RECOVER-Adult US cohort

Nature Communications(2025)10.1038/s41467-025-65239-4

Top 43%

0.436DataRank

Top 43%16 citations

Sarah E. Donohue, Jeffrey N. Martin, Mady Hornig, Jarrod Mosier, Daniel J. Shinnick +49 more

Clinical immunity to malaria involves epigenetic reprogramming of innate immune cells

PNAS Nexus(2024)10.1093/pnasnexus/pgae325

N/A

0.373DataRank · unranked

11 citations

Maureen Ty, Michele Donato, John Rek, Richard Kajubi, Xuhuai Ji +14 more

Factors associated with immune responses to SARS-CoV-2 vaccination in individuals with autoimmune diseases

JCI Insight(2024)10.1172/jci.insight.180750

N/A

0.373DataRank · unranked

11 citations

Michael D. Powell, Emily Yu-Ann Yang, Ananya Kar, Tung Ming Leung, Cristina Sison +29 more

Autoantibodies targeting cytokines and connective tissue disease autoantigens are common in acute non-SARS-CoV-2 infections.

Research Square(2022)10.21203/rs.3.rs-1233038/v1

N/A

0.345DataRank · unranked

9 citations

Emily Yu-Ann Yang, A. R. Moore, Shaurya Dhingra, Sarah E. Chang, Xihui Yin +38 more

Innovations in MD-only physician-scientist training: experiences from the Burroughs Wellcome Fund physician-scientist institutional award initiative

Journal of Clinical Investigation(2021)10.1172/jci149948

N/A

0.330DataRank · unranked

8 citations

Jacqueline A. Hawkins-Salsbury, Vineet M. Arora, Mark T. Gladwin, James R. Goldenring, David P. Huston +12 more

Soluble urine activated leukocyte cell adhesion molecule is a strong predictor of lupus nephritis

Lara D. Veeken(2024)10.1093/rheumatology/keae559

N/A

0.330DataRank · unranked

8 citations

Noa Schwartz, Jeanette Ampudia, Joel M. Guthridge, Judith A. James, Jill P. Buyon +50 more

Human KIR + CD8 + T cells target pathogenic T cells in Celiac disease and are active in autoimmune diseases and COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.23.473930

N/A

0.165DataRank · unranked

2 citations

Maxim Zaslavsky, Yapeng Su, Michael J. Sikora, Vincent van Unen, Asbjørn Christophersen +27 more

Single-cell analysis of the epigenomic and transcriptional landscape of innate immunity to seasonal and adjuvanted pandemic influenza vaccination in humans

medRxiv(2021)10.1101/2021.05.24.21253087

N/A

0.165DataRank · unranked

2 citations

Michele Donato, Alex Kuo, Tal Ashuach, Shakti Gupta, Chunfeng Li +18 more

Distinct Type 1 Immune Networks Underlie the Severity of Restrictive Lung Disease after COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.03.587929

N/A

0.165DataRank · unranked

2 citations

Lyndsey M. Muehling, Alexandra Kadl, Shay Ladd, Catherine A. Bonham, Claire E. Cross +15 more

Systems biological assessment of the temporal dynamics of immunity to a viral infection in the first weeks and months of life

medRxiv(2023)10.1101/2023.01.28.23285133

N/A

0.165DataRank · unranked

2 citations

Allison R Burrell, Yupeng Feng, Hong Zheng, Prabhu S. Arunachalam, Mengyun Hu +29 more

Systems Immunology of Long Covid: Insights from the STOP-PASC Clinical Trial

medRxiv(2025)10.64898/2025.12.04.25341650

N/A

0DataRank · unranked

0 citations

Woo Joo Kwon, Hong Zheng, Tyler R. Prestwood, Haley Hedlin, Jane W. Liang +24 more

Ancestry-based differences in the immune system are associated with lupus severity

Research Square(2021)10.21203/rs.3.rs-1149629/v1

N/A

0DataRank · unranked

2 citations

Kevin Thomas, Miles Smith, Susan Macwana, Aleksandra Bylinska, Joseph Kheir +22 more

High Interferon Signature Leads to Increased STAT1/3/5 Phosphorylation in PBMCs From SLE Patients by Single Cell Mass Cytometry

Frontiers in Immunology(2022)10.3389/fimmu.2022.833636

N/A

0DataRank · unranked

17 citations

Tue Kruse Rasmussen, Brandon L. Tsai, Vivian K. Diep, D. James Haddon, Jennifer Tsoi +6 more

Anti‐phospholipid antibodies are elevated and functionally active in chronic rhinosinusitis with nasal polyps

Clinical & Experimental Allergy(2022)10.1111/cea.14120

N/A

0DataRank · unranked

10 citations

Jeffanie Wu, Whitney W. Stevens, Junqin Bai, Songwang Hou, Julia Huang +14 more

Inferring direction of associations between histone modifications using a neural processes-based framework

iScience(2022)10.1016/j.isci.2022.105756

N/A

0DataRank · unranked

3 citations

Denis Đermadi, Laurynas Kalesinskas, Michele Donato, Rosalie Sowers, Paul J. Utz +2 more

Malaria-driven expansion of adaptive-like functional CD56-negative NK cells correlates with clinical immunity to malaria

Research Square(2022)10.21203/rs.3.rs-1820334/v1

N/A

0DataRank · unranked

2 citations

Maureen Ty, Shenghuan Sun, Perri C. Callaway, John Rek, Kathleen D. Press +25 more

Antigen presentation by B cells enables epitope spreading across an MHC barrier

Nature Communications(2023)10.1038/s41467-023-42541-7

N/A

0DataRank · unranked

42 citations

Thomas R. Wittenborn, Ewa Terczyńska‐Dyla, Kristian Savstrup Kastberg, Emily Yu-Ann Yang, Alysa Nicole Rallistan +18 more

Climate change and public health

EMBO Reports(2023)10.15252/embr.202356821

N/A

0DataRank · unranked

29 citations

Juan Aguilera, Jo Ann Efobi, Youn Soo Jung, Hana Seastedt, Mihir Shah +6 more

Ancestry-based differences in the immune phenotype are associated with lupus activity

JCI Insight(2023)10.1172/jci.insight.169584

N/A

0DataRank · unranked

14 citations

Kevin L. Thomas, Miles Smith, Catriona A. Wagner, Susan Macwana, Aleksandra Bylinska +21 more

Epigenetic Profiling of PTPN11 Mutant JMML Hematopoietic Stem and Progenitor Cells Reveals an Aberrant Histone Landscape

Cancers(2023)10.3390/cancers15215204

N/A

0DataRank · unranked

2 citations

Mai Dvorak, Ananthakrishnan Ganesan, Larry Kalesinskas, Charlotte M. Niemeyer, Christian Flotho +11 more

Epigenetic Profiling of PTPN11 Mutant JMML Hematopoietic Stem and Progenitor Cells Reveals an Aberrant Histone Landscape

Preprints.org(2023)10.20944/preprints202310.0385.v1

N/A

0DataRank · unranked

1 citations

Mai Dvorak, Ananthakrishnan Ganesan, Larry Kalesinskas, Charlotte M. Niemeyer, Christian Flotho +11 more

Clonal replacement sustains long-lived germinal centers primed by respiratory viruses

UNC Libraries(2023)10.17615/j3nj-rf95

N/A

0DataRank · unranked

0 citations

Alexandru Barbulescu, Paul J. Utz, Gabriel D. Victora, Allan Feng, Sarah R. Leist +13 more

Xist ribonucleoproteins promote female sex-biased autoimmunity

Cell(2024)10.1016/j.cell.2023.12.037

N/A

0DataRank · unranked

216 citations

Yanding Zhao, Julia A. Belk, Yang Zhao, Kerriann M. Casey, Derek C. Chen +19 more

Integrated, multicohort analysis reveals unified signature of systemic lupus erythematosus

JCI Insight(2020)10.1172/jci.insight.122312

N/A

0DataRank · unranked

54 citations

D. James Haddon, Vivian K. Diep, Avani Khatri, Erika Bongen, Gloria Yiu +6 more

Unveiling the proteome-wide autoreactome enables enhanced evaluation of emerging CAR T cell therapies in autoimmunity

Journal of Clinical Investigation(2024)10.1172/jci180012

N/A

0DataRank · unranked

44 citations

David Yu, Alysa Rallistan, Müge Kalaycıoğlu, Jim Boonyaratanakornkit, Damian J. Green +29 more

Association of Autoantibody Concentrations and Trajectories With Lupus Nephritis Histologic Features and Treatment Response

Arthritis & Rheumatology(2024)10.1002/art.42941

N/A

0DataRank · unranked

36 citations

Catriona A. Wagner, Carla Guthridge, Joseph Kheir, Susan Macwana, Wade DeJager +14 more

A multimodal atlas of COVID-19 severity identifies hallmarks of dysregulated immunity

medRxiv(2025)10.1101/2025.09.19.25334095

N/A

0DataRank · unranked

0 citations

Pritha Sen, Christopher V. Cosgriff, Jessica Tantivit, Thomas Eisenhaure, Thomas J. LaSalle +61 more

Epstein-Barr virus reprograms autoreactive B cells as antigen-presenting cells in systemic lupus erythematosus

Science Translational Medicine(2025)10.1126/scitranslmed.ady0210

N/A

0DataRank · unranked

60 citations

Salvinaz Islam Moutusy, Sajede Rasouli, Shaghayegh Jahanbani, Mahesh Pandit, Xiaohao Wu +19 more

Antibody reactivity against EBNA1 and GlialCAM differentiates multiple sclerosis patients from healthy controls

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2424986122

N/A

0DataRank · unranked

46 citations

Ingrid Kockum, Olivia Thomas, Yicong Liu, Peggy P. Ho, Alison K. Barrett +9 more

Inhibition of CXCL10 and IFN-γ ameliorates myocarditis in preclinical models of SARS-CoV-2 mRNA vaccination

Science Translational Medicine(2025)10.1126/scitranslmed.adq0143

N/A

0DataRank · unranked

10 citations

Amit Manhas, Y.M. Chen, Arianne Caudal, Gema Mondéjar‐Parreño, Wenjuan Zhu +11 more

Distinct type 1 immune networks underlie the severity of restrictive lung disease after COVID-19

Nature Immunology(2025)10.1038/s41590-025-02110-0

N/A

0DataRank · unranked

10 citations

Lyndsey M. Muehling, Alexandra Kadl, Shay Ladd, Catherine A. Bonham, Claire E. Cross +19 more

Longitudinal Patient-Reported Outcome Trajectories in Long COVID: Findings From the STOP-PASC Clinical Trial

Open Forum Infectious Diseases(2025)10.1093/ofid/ofaf634

N/A

0DataRank · unranked

1 citations

Haley Hedlin, Jane W. Liang, Blake Shaw, Evan Maestri, Michelle I. Lin +5 more

Persistent Immune Dysregulation during Post-Acute Sequelae of COVID-19 is Manifested in Antibodies Targeting Envelope and Nucleocapsid Proteins

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.18.670908

N/A

0DataRank · unranked

5 citations

Manikannan Mathayan, Satyajeet S. Salunkhe, Velavan Bakthavachalam, Zijing Ye, Mark A. Sanborn +14 more

Deep Phenotyping Long-COVID Postural Tachycardia Syndrome

medRxiv(2025)10.1101/2025.04.28.25326587

N/A

0DataRank · unranked

0 citations

Jannika Machnik, Jordan Seliger, Ruba Shaik, Maarten G. Lansberg, Srikanth Muppidi +5 more

Batch Correction and Comparison of Intracellular Signaling Among Multiple Rheumatic and Inflammatory Diseases

Journal of Probability and Statistics(2025)10.1155/jpas/5014500

N/A

0DataRank · unranked

0 citations

Michael Couse, Yael Rosenberg‐Hasson, Rosemary Fernandez, Ajay Fernandez, Kavita Mathi +10 more

High levels of nonblocking anti-interferon and anticytokine autoantibodies in individuals with mRNA vaccine–induced systemic allergic reactions

Journal of Allergy and Clinical Immunology Global(2025)10.1016/j.jacig.2025.100622

N/A

0DataRank · unranked

0 citations

Allan Feng, Shaurya Dhingra, Muhammad Bilal Khalid, Kari C. Nadeau, Paul J. Utz +2 more

The intersection of COVID-19 and autoimmunity

Journal of Clinical Investigation(2021)10.1172/jci154886

N/A

0DataRank · unranked

218 citations

Roberto Caricchio, Jean-Laurent Casanova, Alexis J. Combes, Betty Diamond, Sharon E. Fox +14 more

Paul J. Utz

Indexed papers

Top data-sharing exemplar

Papers