James R. Broach

Penn State Milton S. Hershey Medical Center

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.1Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An integrative ENCODE resource for cancer genomics

Nature Communications(2020)10.1038/s41467-020-14743-w

Top 5%

4.1DataRank

Top 5%190 citations

Donghoon Lee, Vineet K. Dhiman, Peng Jiang, Jie Xu, Patrick D. McGillivray +53 more

Papers

Driven by 32 papers — median percentile 68. Top paper: “An integrative ENCODE resource for cancer genomics”.

An integrative ENCODE resource for cancer genomics

Nature Communications(2020)10.1038/s41467-020-14743-w

Top 5%

4.1DataRank

Top 5%190 citations

Donghoon Lee, Vineet K. Dhiman, Peng Jiang, Jie Xu, Patrick D. McGillivray +53 more

A framework for sharing of clinical and genetic data for precision medicine applications

Nature Medicine(2024)10.1038/s41591-024-03239-5

N/A

0.857DataRank · unranked

32 citations

Ulugbek K. Baymuradov, Hemali Phatnani, Justin Kwan, Dhruv Sareen, James R. Broach +63 more

Subtype-specific 3D genome alteration in acute myeloid leukaemia

Nature(2022)10.1038/s41586-022-05365-x

N/A

0.808DataRank · unranked

218 citations

Fan Song, Huijue Lyu, Mikoto Kobayashi, Baozhen Zhang, Ziyu Zhao +24 more

Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156

Microbiology Resource Announcements(2020)10.1128/mra.00181-20

Top 32%

0.612DataRank

Top 32%11 citations

Lijun Zhang, Joseph N. Paulson, Mathieu Almeida, Benjamin von Bredow, Dona Saumya S. Wijetunge +5 more

TDP-43 loss induces cryptic polyadenylation in ALS/FTD

Nature Neuroscience(2025)10.1038/s41593-025-02050-w

N/A

0.593DataRank · unranked

23 citations

Anna‐Leigh Brown, Max Z. Y. J. Chien, Dario Dattilo, Puja R. Mehta, Francesca Mattedi +94 more

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

iScience(2021)10.1016/j.isci.2021.103221

N/A

0.593DataRank · unranked

51 citations

Justin Kwan, Dhruv Sareen, James R. Broach, Zachary Simmons, Ximena Arcila-Londono +92 more

Complete genome sequence and analysis of a Saccharomyces cerevisiae strain used for sugarcane spirit production

Brazilian Journal of Microbiology(2021)10.1007/s42770-021-00444-z

Top 47%

0.391DataRank

Top 47%8 citations

Jacob Hornick, Tathiana Ferreira Sá Antunes, Alexandre Martins Costa Santos, Antônio Alberto Ribeiro Fernandes, James R. Broach +2 more

Integrating Optical Genome Mapping and Whole Genome Sequencing in Somatic Structural Variant Detection

Journal of Personalized Medicine(2024)10.3390/jpm14030291

N/A

0.360DataRank · unranked

10 citations

Diwakar Bastihalli Tukaramrao, Lijun Zhang, Sinisa Dovat, James R. Broach, Laura Budurlean

Infection diagnosis in hydrocephalus CT images: a domain enriched attention learning approach

Journal of Neural Engineering(2023)10.1088/1741-2552/acd9ee

N/A

0.312DataRank · unranked

7 citations

Mallory Peterson, Venkateswararao Cherukuri, Christine Hehnly, Edith Mbabazi-Kabachelor, Ronnie Mulondo +5 more

Human Paenibacillus Infections: A Systematic Review with Comparison of Adult and Infant Cases

medRxiv(2023)10.1101/2023.09.19.23295794

N/A

0.186DataRank · unranked

2 citations

Kristen Bastug, Kathy Burgoine, James R. Broach, Christine Hehnly, Sarah U. Morton +4 more

Type IV pili is a critical virulence factor in clinical isolates of Paenibacillus thiaminolyticus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.24.477451

N/A

0DataRank · unranked

0 citations

Aiqin Shi, Paddy Ssentongo, Lijun Zhang, Albert M. Isaacs, Sarah U. Morton +11 more

Brain Attention Regularized Networks: Infection Diagnosis in Hydrocephalus CT Images

(2022)10.36227/techrxiv.19146362.v1

N/A

0DataRank · unranked

0 citations

Mallory Peterson, Venkateswararao Cherukuri, Christine Hehnly, Edith Mbabazi-Kabachelor, Ronnie Mulondo +5 more

Brain Attention Regularized Networks: Infection Diagnosis in Hydrocephalus CT Images

(2022)10.36227/techrxiv.19146362

N/A

0DataRank · unranked

0 citations

Mallory Peterson, Venkateswararao Cherukuri, Christine Hehnly, Edith Mbabazi-Kabachelor, Ronnie Mulondo +5 more

Brain Attention Regularized Networks: Infection Diagnosis in Hydrocephalus CT Images

INDIGO (University of Illinois at Chicago)(2022)10.36227/techrxiv.19146362.v2

N/A

0DataRank · unranked

0 citations

Mallory Peterson, Venkateswararao Cherukuri, Christine Hehnly, Edith Mbabazi-Kabachelor, Ronnie Mulondo +5 more

Neonatal Paenibacilliosis: Paenibacillus thiaminolyticus as a Novel Cause of Neonatal Sepsis with High Risk of Sequelae in Uganda

medRxiv(2022)10.1101/2022.11.07.22281940

N/A

0DataRank · unranked

0 citations

Kathy Burgoine, Elias Kumbakumba, Moses Ochora, Christine Hehnly, Francis Bajunirwe +27 more

Transcriptional Response of Multi-Stress-Tolerant Saccharomyces cerevisiae to Sequential Stresses

Fermentation(2023)10.3390/fermentation9020195

N/A

0DataRank · unranked

17 citations

Mariano Russo, Antônio Alberto Ribeiro Fernandes, James R. Broach, Patrícia Machado Bueno Fernandes, Ane Catarine Tosi Costa

Paenibacillus spp infection among infants with postinfectious hydrocephalus in Uganda: an observational case-control study

The Lancet Microbe(2023)10.1016/s2666-5247(23)00106-4

N/A

0DataRank · unranked

15 citations

Christine Hehnly, Kathy Burgoine, Paddy Ssentongo, Jessica E. Ericson, M. S. Binoj Kumar +34 more

Neonatal Paenibacilliosis: Paenibacillus Infection as a Novel Cause of Sepsis in Term Neonates With High Risk of Sequelae in Uganda

Clinical Infectious Diseases(2023)10.1093/cid/ciad337

N/A

0DataRank · unranked

14 citations

Kathy Burgoine, Elias Kumbakumba, Moses Ochora, Christine Hehnly, Francis Bajunirwe +27 more

A Systematic Review of Human Paenibacillus Infections and Comparison of Adult and Pediatric Cases

The Pediatric Infectious Disease Journal(2024)10.1097/inf.0000000000004668

N/A

0DataRank · unranked

8 citations

Kristen Bastug, Kathy Burgoine, James R. Broach, E. Adrianne Hammershaimb, Christine Hehnly +5 more

Mitochondrial genome variants associated with amyotrophic lateral sclerosis and their haplogroup distribution

Muscle & Nerve(2024)10.1002/mus.28230

N/A

0DataRank · unranked

1 citations

João H. C. Campos, Renata C. Ferreira, Lisa Schneper, Ilda M. Santos, Fernando Antoneli +2 more

Mitochondrial genome variants associated with Amyotrophic Lateral Sclerosis and their haplogroup distribution

medRxiv(2024)10.1101/2024.04.23.24306232

N/A

0DataRank · unranked

0 citations

João H. C. Campos, Renata C. Ferreira, Lisa Schneper, Ilda M. Santos, Fernando Antoneli +2 more

Current challenges and potential opportunities for interception and prevention of head and neck cancer

Carcinogenesis(2025)10.1093/carcin/bgaf025

N/A

0DataRank · unranked

3 citations

Neil D. Christensen, James R. Broach, Craig Meyers, Douglas B. Stairs, Mitchell Machtay +9 more

Poor Surgical Outcomes Following Paenibacillus Infant Infectious Hydrocephalus

medRxiv(2025)10.1101/2025.05.08.25327256

N/A

0DataRank · unranked

0 citations

Davis Natukwatsa, Peter Ssenyonga, Justin Onen, John Mugamba, Ronald Mulondo +11 more

Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants

Science Translational Medicine(2020)10.1126/scitranslmed.aba0565

N/A

0DataRank · unranked

55 citations

Brent L. Williams, Christine Hehnly, Nischay Mishra, Shamim A. Sinnar, Lijun Zhang +47 more

Vaginal Microbiome Topic Modelling of Laboring Ugandan Women With and Without Fever

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.401703

N/A

0DataRank · unranked

0 citations

Lisa M. Bebell, Kathy Burgoine, Christine Hehnly, Lijun Zhang, Kim Moran +19 more

An engineered protein-phosphorylation toggle network with implications for endogenous network discovery

Science(2021)10.1126/science.aav0780

N/A

0DataRank · unranked

37 citations

Tristan Bepler, Brian Teague, Bonnie Berger, James R. Broach, Ron Weiss +1 more

Immune activation during Paenibacillus brain infection in African infants with frequent cytomegalovirus co-infection

iScience(2021)10.1016/j.isci.2021.102351

N/A

0DataRank · unranked

13 citations

Sarah U. Morton, Mercedeh Movassagh, Qiang Zhang, Christine Hehnly, Lijun Zhang +15 more

Differential richness inference for 16S rRNA marker gene surveys

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.07.467583

N/A

0DataRank · unranked

1 citations

Eric Slud, Christine Hehnly, Lijun Zhang, James R. Broach, Rafael A. Irizarry +3 more

TDP-43 loss and ALS-risk SNPs drive mis-splicing and depletion of UNC13A

Nature(2022)10.1038/s41586-022-04436-3

N/A

0DataRank · unranked

525 citations

Oscar G. Wilkins, Matthew J. Keuss, Sarah E. Hill, Matteo Zanovello, Weaverly Colleen Lee +90 more

mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis

BMC Genomics(2022)10.1186/s12864-022-08558-w

N/A

0DataRank · unranked

14 citations

Sarah U. Morton, Christine Hehnly, Jasmine Smith, Trang T. Doan, Rafael A. Irizarry +5 more

Differential richness inference for 16S rRNA marker gene surveys

Genome biology(2022)10.1186/s13059-022-02722-x

N/A

0DataRank · unranked

10 citations

Eric Slud, Christine Hehnly, Lijun Zhang, James R. Broach, Rafael A. Irizarry +3 more

Cytomegalovirus infections in infants in Uganda: Newborn-mother pairs, neonates with sepsis, and infants with hydrocephalus

International Journal of Infectious Diseases(2022)10.1016/j.ijid.2022.02.005

N/A

0DataRank · unranked

5 citations

Paddy Ssentongo, Lisa M. Bebell, Kathy Burgoine, Joel Bazira, Claudio Fronterrè +21 more

James R. Broach

Indexed papers

Top data-sharing exemplar

Papers