🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Huan He

Fujian Medical University

ORCID: 0000-0003-1312-4195

Also affiliated with Nanchang University, Anhui Medical University, Yale University, Fujian Jiangxia University, Fuzhou University

Biochemistry, Genetics and Molecular BiologyComputer ScienceSocial Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.8Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Collaborative large language models for automated data extraction in living systematic reviews

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocae325
Top 23%
0.892DataRank
Top 23%36 citations

Umair Ayub, Syed Arsalan Ahmed Naqvi, Kaneez Zahra Rubab Khakwani, Zaryab bin Riaz Sipra, Ammad Raina +16 more

Papers

Driven by 19 papers — median percentile 61. Top paper: “Post-translational modification patterns on β-myosin heavy chain are altered in ischemic and nonischemic human hearts”.

Post-translational modification patterns on β-myosin heavy chain are altered in ischemic and nonischemic human hearts

eLife(2022)10.7554/elife.74919
N/A
0.992DataRank · unranked
22 citations

Matthew C. Childers, Amanda L. Wacker, Michelle Rodriquez Garcia, Huan He, Rakesh Singh +10 more

Collaborative large language models for automated data extraction in living systematic reviews

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocae325
Top 23%
0.892DataRank
Top 23%36 citations

Umair Ayub, Syed Arsalan Ahmed Naqvi, Kaneez Zahra Rubab Khakwani, Zaryab bin Riaz Sipra, Ammad Raina +16 more

Clinical concept extraction: A methodology review

Journal of Biomedical Informatics(2020)10.1016/j.jbi.2020.103526
N/A
0.780DataRank · unranked
180 citations

David Chen, Huan He, Sijia Liu, Sungrim Moon, Kevin J. Peterson +8 more

An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C)

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad134
N/A
0.494DataRank · unranked
26 citations

Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert Miller +23 more

Impact of Diverse Data Sources on Computational Phenotyping

Frontiers in Genetics(2020)10.3389/fgene.2020.00556
Top 39%
0.484DataRank
Top 39%10 citations

Janet E. Olson, Suzette J. Bielinski, Jennifer L. St. Sauver, Sunyang Fu, Huan He +5 more

An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses

Journal of Biomedical Informatics(2020)10.1016/j.jbi.2020.103660
N/A
0.457DataRank · unranked
20 citations

Liwei Wang, Huan He, Sijia Liu, Sunyang Fu, Sunghwan Sohn +8 more

Collaborative Large Language Models for Automated Data Extraction in Living Systematic Reviews

medRxiv(2024)10.1101/2024.09.20.24314108
Top 46%
0.397DataRank
Top 46%8 citations

Umair Ayub, Syed Arsalan Ahmed Naqvi, Kaneez Zahra Rubab Khakwani, Zaryab bin Riaz Sipra, Ammad Raina +16 more

An Aberration Detection-Based Approach for Sentinel Syndromic Surveillance of COVID-19 and Other Novel Influenza-Like Illnesses

medRxiv(2020)10.1101/2020.06.08.20124990
N/A
0.312DataRank · unranked
7 citations

Liwei Wang, Huan He, Sijia Liu, Sunyang Fu, Sunghwan Sohn +8 more

The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era

npj Digital Medicine(2023)10.1038/s41746-023-00878-9
N/A
0.208DataRank · unranked
3 citations

Huan He, Sunyang Fu, Sijia Liu, Kurt Miller, Liwei Wang +5 more

Acquisition of a Lexicon for Family History Information: Bidirectional Encoder Representations From Transformers–Assisted Sublanguage Analysis

JMIR Medical Informatics(2023)10.2196/48072
N/A
0.165DataRank · unranked
2 citations

Huan He, Andrew Wen, Sungrim Moon, Sunyang Fu, Kevin J. Peterson +5 more

An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C)

UNC Libraries(2025)10.17615/wb8c-t328
N/A
0DataRank · unranked
0 citations

Timothy Q. Duong, Hua Xu, Daniel R. Harris, Melissa A Haendel, Rafael Fuentes +23 more

MedTator: a serverless annotation tool for corpus development

Bioinformatics(2021)10.1093/bioinformatics/btab880
N/A
0DataRank · unranked
29 citations

Sunyang Fu, Liwei Wang, Sijia Liu, Andrew Wen, Hongfang Liu +1 more

Assessment of Electronic Health Record for Cancer Research and Patient Care Through a Scoping Review of Cancer Natural Language Processing

JCO Clinical Cancer Informatics(2022)10.1200/cci.22.00006
N/A
0DataRank · unranked
51 citations

Sunyang Fu, Andrew Wen, Xiaoyang Ruan, Huan He, Sijia Liu +9 more

Patient Portal Messaging for Asynchronous Virtual Care During the COVID-19 Pandemic: Retrospective Analysis

JMIR Human Factors(2022)10.2196/35187
N/A
0DataRank · unranked
34 citations

Aditya Khurana, George Mastorakos, Andrew Wen, Huan He, Liwei Wang +11 more

Recommended practices and ethical considerations for natural language processing‐assisted observational research: A scoping review

Clinical and Translational Science(2022)10.1111/cts.13463
N/A
0DataRank · unranked
26 citations

Liwei Wang, Sungrim Moon, Nansu Zong, Huan He, Vikas Pejaver +6 more

MedTator: A Serverless Web-based Tool for Corpus Annotation

2022 IEEE 10th International Conference on Healthcare Informatics (ICHI)(2022)10.1109/ichi54592.2022.00099
N/A
0DataRank · unranked
1 citations

Sunyang Fu, Liwei Wang, Andrew Wen, Sijia Liu, Hongfang Liu +1 more

The Dengue virus protease NS2B3 cleaves cyclic GMP-AMP synthase to suppress cGAS activation

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.102986
N/A
0DataRank · unranked
16 citations

Debipreeta Bhowmik, Yuan Tian, Huan He, Fanxiu Zhu, Qian Yin +1 more

TopicForest: embedding-driven hierarchical clustering and labeling for biomedical literature

Journal of Biomedical Informatics(2025)10.1016/j.jbi.2025.104958
N/A
0DataRank · unranked
3 citations

Brian Ondov, Bin Choi, Xueqing Peng, Huan He, Hua Xu +1 more

Systemic treatment options for metastatic castration resistant prostate cancer: A living systematic review

medRxiv(2025)10.1101/2025.04.15.25325837
N/A
0DataRank · unranked
0 citations

Muhammad Umair Anjum, Arifa Bibi, Muhammad Ali Khan, Kaneez Zahra Rubab Khakwani, Huan He +19 more