🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Arina D. Omer

Baylor College of Medicine

ORCID: 0000-0003-1336-2505

Also affiliated with Center for Theoretical Biological Physics, Baylor Genetics, Rice University

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
6.0Author DataRank

Indexed papers

14in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 14 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C

GigaScience(2020)10.1093/gigascience/giaa027
Top 11%
1.8DataRank
Top 11%70 citations

Benjamin D. Rosen, Olga Dudchenko, Eva K.F. Chan, André E. Minoche, Richard J. Edwards +15 more

Papers

Driven by 26 papers — median percentile 45. Top paper: “3D genomics across the tree of life reveals condensin II as a determinant of architecture type”.

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

Science(2021)10.1126/science.abe2218
N/A
5.8DataRank · unranked
307 citations

Olga Dudchenko, Ahmed M.O. Elbatsh, Sumitabha Brahmachari, Jonne A. Raaijmakers, Tom van Schaik +59 more

The gene-rich genome of the scallop Pecten maximus

GigaScience(2020)10.1093/gigascience/giaa037
N/A
2.5DataRank · unranked
85 citations

Shane A McCarthy, Olga Dudchenko, Katherine James, Emma Betteridge, Craig Corton +16 more

Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C

GigaScience(2020)10.1093/gigascience/giaa027
Top 11%
1.8DataRank
Top 11%70 citations

Benjamin D. Rosen, Olga Dudchenko, Eva K.F. Chan, André E. Minoche, Richard J. Edwards +15 more

Fine-mapping of nuclear compartments using ultra-deep Hi-C shows that active promoter and enhancer elements localize in the active A compartment even when adjacent sequences do not

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.03.462599
N/A
1.1DataRank · unranked
29 citations

Hannah L. Harris, Moshe Olshansky, Yossi Eliaz, Akshay Krishna, Achyuth Kalluchi +20 more

Homologs of Small Nucleolar RNAs in Archaea

Science(2000)10.1126/science.288.5465.517
N/A
0.877DataRank · unranked
345 citations

Todd M. Lowe, Anthony G. Russell, Holger Ebhardt, Sean R. Eddy, Patrick P. Dennis +1 more

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

Cell(2024)10.1016/j.cell.2024.06.002
N/A
0.858DataRank · unranked
45 citations

Olga Dudchenko, Juan Antonio Rodríguez, Cynthia Pérez Estrada, Marianne Dehasque, Claudia Fontsere +51 more

Chromatin alternates between A and B compartments at kilobase scale for subgenic organization

Nature Communications(2023)10.1038/s41467-023-38429-1
N/A
0.759DataRank · unranked
157 citations

Huiya Gu, Moshe Olshansky, Ailun Wang, Irene Farabella, Yossi Eliaz +25 more

Limited Evidence for Parallel Evolution Among Desert-AdaptedPeromyscusDeer Mice

Journal of Heredity(2021)10.1093/jhered/esab009
Top 28%
0.710DataRank
Top 28%30 citations

Anna Tigano, Olga Dudchenko, Arina D. Omer, Ruqayya Khan, Ivan D. Bochkov +3 more

Convergent and complementary selection shaped gains and losses of eusociality in sweat bees

Nature Ecology & Evolution(2023)10.1038/s41559-023-02001-3
N/A
0.598DataRank · unranked
53 citations

Benjamin E. R. Rubin, Olga Dudchenko, Callum J. Kingwell, Ian M. Traniello, Z. Yan Wang +24 more

The genome sequence of the Eurasian river otter, Lutra lutra Linnaeus 1758

Wellcome Open Research(2020)10.12688/wellcomeopenres.15722.1
Top 35%
0.562DataRank
Top 35%18 citations

Frank Hailer, Elizabeth A. Chadwick, Roberto Portela Miguez, Michelle Smith, Craig Corton +17 more

Chromosomal‐level genome assembly of the scimitar‐horned oryx: Insights into diversity and demography of a species extinct in the wild

Molecular Ecology Resources(2020)10.1111/1755-0998.13181
N/A
0.550DataRank · unranked
38 citations

Pavel Dobrynin, Helen Senn, Justin Chuven, Alan F. Scott, David W. Mohr +12 more

Disruption of nuclear architecture as a cause of COVID-19 induced anosmia

Computer Methods in Applied Mechanics and Engineering(2021)10.1101/2021.02.09.430314
N/A
0.494DataRank · unranked
26 citations

Albana Kodra, Daisy A. Hoagland, John F. Fullard, Hani Shayya, Arina D. Omer +9 more

The Australasian dingo archetype: de novo chromosome-length genome assembly, DNA methylome, and cranial morphology

GigaScience(2023)10.1093/gigascience/giad018
Top 40%
0.479DataRank
Top 40%12 citations

Matthew A. Field, Richard J. Edwards, Laura A. B. Wilson, Loukas Koungoulos, Benjamin D. Rosen +11 more

The Sensory Shark: High-quality Morphological, Genomic and Transcriptomic Data for the Small-spotted Catshark Scyliorhinus Canicula Reveal the Molecular Bases of Sensory Organ Evolution in Jawed Vertebrates

Molecular Biology and Evolution(2024)10.1093/molbev/msae246
Top 41%
0.458DataRank
Top 41%13 citations

Jake Leyhr, John F. Mulley, Nicolas Leurs, Léo Michel, Kanika Sharma +32 more

The genome sequence of the Eurasian red squirrel, Sciurus vulgaris Linnaeus 1758

Wellcome Open Research(2020)10.12688/wellcomeopenres.15679.1
Top 43%
0.441DataRank
Top 43%10 citations

Kathryn Fingland, Rachel Cripps, Roberto Portela Miguez, Michelle Smith, Craig Corton +20 more

Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes)

Journal of Heredity(2023)10.1093/jhered/esad035
N/A
0.360DataRank · unranked
10 citations

Marlys L. Houck, Polina L. Perelman, Azamat Totikov, Andrey Tomarovsky, Olga Dudchenko +16 more

Chromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity

Chromosome Research(2023)10.1007/s10577-023-09722-y
Top 55%
0.301DataRank
Top 55%5 citations

Klaus‐Peter Koepfli, Taylor Hains, Ruqayya Khan, S.J. Charter, Julie A. Fronczek +28 more

The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.26.525801
Top 57%
0.276DataRank
Top 57%3 citations

Matthew A. Field, Richard J. Edwards, Laura A. B. Wilson, Loukas Koungoulos, Benjamin D. Rosen +11 more

The sensory shark: high-quality morphological, genomic and transcriptomic data for the small-spotted catshark Scyliorhinus canicula reveal the molecular bases of sensory organ evolution in jawed vertebrates

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.23.595469
Top 59%
0.261DataRank
Top 59%4 citations

Jake Leyhr, John F. Mulley, Nicolas Leurs, Laurent Michel, Kanika Sharma +32 more

Chromosome-length genome assembly and structural variations of the primal Basenji dog (Canis lupus familiaris) genome

Research Square(2020)10.21203/rs.3.rs-135125/v1
Top 65%
0.208DataRank
Top 65%3 citations

Matthew A. Field, James M. Ferguson, Olga Dudchenko, Jens Keilwagen, Benjamin D. Rosen +14 more

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.30.547175
Top 65%
0.208DataRank
Top 65%3 citations

Olga Dudchenko, Juan Antonio Rodríguez, Cynthia Pérez Estrada, Marianne Dehasque, Claudia Fontsere +27 more

Desert Dingo ( Canis lupus dingo ) genome provides insights into their role in the Australian ecosystem

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.15.384057
Top 70%
0.165DataRank
Top 70%2 citations

Olga Dudchenko, Meera Esvaran, Benjamin D. Rosen, Matthew A. Field, Ksenia Skvortsova +21 more

Convergent selection on hormone signaling shaped social evolution in bees

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.14.439731
N/A
0.165DataRank · unranked
2 citations

Benjamin E. R. Rubin, Olga Dudchenko, Callum J. Kingwell, Ian M. Traniello, Z. Yan Wang +24 more

Chromosome-length genome assembly and structural variations of the primal Basenji dog ( Canis lupus familiaris ) genome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.11.379073
Top 78%
0.104DataRank
Top 78%1 citations

Matthew A. Field, James M. Ferguson, Olga Dudchenko, Jens Keilwagen, Benjamin D. Rosen +14 more

Proximity-dependent recruitment of Polycomb repressive complexes by the lncRNA Airn

Cell Reports(2023)10.1016/j.celrep.2023.112803
N/A
0DataRank · unranked
18 citations

Megan D. Schertzer, Arina D. Omer, Jackson B. Trotman, Eric S. Davis, Jill M. Dowen +4 more

Proximity-dependent recruitment of Polycomb Repressive Complexes by the lncRNA Airn

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.20.521198
N/A
0DataRank · unranked
1 citations

Megan D. Schertzer, Arina D. Omer, Jackson B. Trotman, Eric S. Davis, Jill M. Dowen +4 more