Patrick Pirrotte

Translational Genomics Research Institute

Also affiliated with City Of Hope National Medical Center, City of Hope

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.588Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Retracted: PTEN loss drives resistance to the neddylation inhibitor MLN4924 in glioblastoma and can be overcome with TOP2A inhibitors

Neuro-Oncology(2022)10.1093/neuonc/noac067

Top 33%

0.588DataRank

Top 33%8 citations

Brett Taylor, Matthew Lee, Nanyun Tang, Sen Peng, Rita Bybee +11 more

Papers

Driven by 53 papers — median percentile 67. Top paper: “Pathogenesis of Alzheimer's disease: Involvement of the choroid plexus”.

Pathogenesis of Alzheimer's disease: Involvement of the choroid plexus

Alzheimer s & Dementia(2023)10.1002/alz.12970

N/A

2.6DataRank · unranked

91 citations

Isaac G. Onyango, Stanislav Katina, Dušan Holub, Jan Novotný, Markéta Nezvedová +36 more

Non-synaptic function of the autism spectrum disorder-associated gene SYNGAP1 in cortical neurogenesis

Nature Neuroscience(2023)10.1038/s41593-023-01477-3

N/A

0.672DataRank · unranked

87 citations

Ashley Del Dosso, Tiantian Xu, Tuan Nguyen, Brent Wilkinson, Negar Hosseini +15 more

Urinary glyphosate concentration in pregnant women in relation to length of gestation

Environmental Research(2021)10.1016/j.envres.2021.111811

N/A

0.641DataRank · unranked

71 citations

Khyatiben V. Pathak, Patrick Pirrotte, Melissa Martinez, Kelly K. Ferguson, Emily S. Barrett +6 more

Re-expression of SMARCA4/BRG1 in small cell carcinoma of ovary, hypercalcemic type (SCCOHT) promotes an epithelial-like gene signature through an AP-1-dependent mechanism

eLife(2020)10.7554/elife.59073

N/A

0.596DataRank · unranked

52 citations

Amber K Douglas, Aierken Abudu, Yemin Wang, Basile Tessier‐Cloutier, Weiping Su +18 more

Retracted: PTEN loss drives resistance to the neddylation inhibitor MLN4924 in glioblastoma and can be overcome with TOP2A inhibitors

Neuro-Oncology(2022)10.1093/neuonc/noac067

Top 33%

0.588DataRank

Top 33%8 citations

Brett Taylor, Matthew Lee, Nanyun Tang, Sen Peng, Rita Bybee +11 more

Shotgun proteomics coupled to nanoparticle-based biomarker enrichment reveals a novel panel of extracellular matrix proteins as candidate serum protein biomarkers for early-stage breast cancer detection

Breast Cancer Research(2020)10.1186/s13058-020-01373-9

N/A

0.546DataRank · unranked

37 citations

Khyatiben V. Pathak, Luisa Paris, Kristina Chapple, Kristine A. Tsantilas, Matthew Rosenow +14 more

Targeting PRMT9-mediated arginine methylation suppresses cancer stem cell maintenance and elicits cGAS-mediated anticancer immunity

Nature Cancer(2024)10.1038/s43018-024-00736-x

N/A

0.524DataRank · unranked

32 citations

Xin He, Lei Zhang, Wei Chen, Yi‐Chun Lin, Songbai Liu +27 more

Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome

eLife(2023)10.7554/elife.85595

N/A

0.442DataRank · unranked

18 citations

Amy Leung, Kevin R Costello, Parijat Senapati, Hiroyuki Kato, Roger E. Moore +7 more

Comprehensive tumor-immune profiling reveals mediators of paradoxical immune sensitivity in sarcomatoid renal cell carcinoma

Cancer Cell(2025)10.1016/j.ccell.2025.07.010

N/A

0.416DataRank · unranked

15 citations

Adil Khan, Wilhelm M. Aubrecht, Gavin C Twoey, Jacky Chow, Kristopher Attwood +26 more

Metabolic convergence on lipogenesis in RAS, BCR-ABL, and MYC-driven lymphoid malignancies

Cancer & Metabolism(2021)10.1186/s40170-021-00263-8

N/A

0.360DataRank · unranked

10 citations

Meital Ryan, Zhichao Wang, Khyatiben V. Pathak, Seema B. Plaisier, Vidhi M. Shah +11 more

ALKBH1 Drives Tumorigenesis and Drug Resistance via tRNA-decoding Reprogramming and Codon-biased Translation

Cancer Discovery(2025)10.1158/2159-8290.cd-24-1043

N/A

0.330DataRank · unranked

8 citations

Yuan Che, Keren Zhou, Kitty Wang, Wei Li, D. S. Xue +28 more

Proteomic analysis identifies plasma correlates of remote ischemic conditioning in the context of experimental traumatic brain injury

Scientific Reports(2020)10.1038/s41598-020-69865-4

N/A

0.310DataRank · unranked

3 citations

Khyatiben V. Pathak, Marissa McGilvrey, Krystine Garcia‐Mansfield, Jordan L. Harrison, Rachel K. Rowe +3 more

Dynamic Transcriptomic Network Responses to Divergent Acute Exercise Challenges in Young Adults

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.14.507939

N/A

0.139DataRank · unranked

1 citations

Zachary Graham, Jeremy S. McAdam, Samia M. O’Bryan, Devin Drummer, Margaret B. Bell +22 more

Hepatic steatosis in postmenopausal women is characterized by distinct serum extracellular vesicle proteomic signatures

BMC Medicine(2025)10.1186/s12916-025-04571-4

N/A

0.104DataRank · unranked

1 citations

Brooke Lovell, Sioḃán D. Harlow, Carrie Karvonen‐Gutierrez, Michelle M. Hood, Ignazio S. Piras +7 more

Key regulatory roles of PRDM1 in human NK-cell differentiation and activation

Leukemia(2025)10.1038/s41375-025-02815-z

N/A

0.104DataRank · unranked

1 citations

Yunfei Shi, Jibin Zhang, Kunal Shetty, Krystie Chew, Can Küçük +17 more

A novel class of inhibitors that disrupts the stability of integrin heterodimers identified by CRISPR-tiling-instructed genetic screens

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01211-y

N/A

0DataRank · unranked

21 citations

Anthony Chan, Kazuya Miyashita, Elizaveta Mukhaleva, Wenhan Chang, Lu Yang +22 more

Glyphosate exposure exacerbates neuroinflammation and Alzheimer’s disease-like pathology despite a 6-month recovery period in mice

Journal of Neuroinflammation(2024)10.1186/s12974-024-03290-6

N/A

0DataRank · unranked

21 citations

Wendy Winslow, Ritin Sharma, Khyatiben V. Pathak, Savannah Tallino, Jessica M. Judd +5 more

AOH1996 targets mitochondrial dynamics and metabolism in leukemic stem cells via mitochondrial PCNA inhibition

Experimental Hematology and Oncology(2024)10.1186/s40164-024-00586-4

N/A

0DataRank · unranked

14 citations

Melissa Valerio, Jia Feng, Long Gu, Dinh Hoa Hoang, Amanda Blackmon +13 more

Changes in proteomic cargo of circulating extracellular vesicles in response to lifestyle intervention in adolescents with hepatic steatosis

Clinical Nutrition ESPEN(2024)10.1016/j.clnesp.2024.02.024

N/A

0DataRank · unranked

12 citations

Ignazio S. Piras, Xiumei Wu, Ritin Sharma, Krystine Garcia‐Mansfield, Maya Willey +5 more

Immunometabolic Adaptation of CD19-Targeted CAR T Cells in the Central Nervous System Microenvironment of Patients Promotes Memory Development

Cancer Research(2024)10.1158/0008-5472.can-23-2299

N/A

0DataRank · unranked

11 citations

Eric R. Haas, Ryan Urak, Vibhuti Vyas, Khyatiben V. Pathak, Krystine Garcia‐Mansfield +7 more

EGFRvIII Confers Sensitivity to Saracatinib in a STAT5-Dependent Manner in Glioblastoma

International Journal of Molecular Sciences(2024)10.3390/ijms25116279

N/A

0DataRank · unranked

7 citations

Ryan Eghlimi, Angad Beniwal, Dustin Grief, David Nascari, Landon J. Inge +11 more

Phosphoproteomic Profiling Reveals mTOR Signaling in Sustaining Macrophage Phagocytosis of Cancer Cells

Cancers(2024)10.3390/cancers16244238

N/A

0DataRank · unranked

3 citations

Xu Cao, Krystine Garcia‐Mansfield, Jingkai Zhou, Antigoni Manousopoulou, Patrick Pirrotte +4 more

OST-01, a natural product from Baccharis coridifolia, targets c-Myc-dependent ribogenesis in acute myeloid leukemia

Leukemia(2024)10.1038/s41375-024-02146-5

N/A

0DataRank · unranked

4 citations

Dinh Hoa Hoang, Melissa Valerio, Khyatiben V. Pathak, Lianjun Zhang, Ralf Buettner +12 more

Glioblastoma vulnerability to neddylation inhibition is dependent on PTEN status, and dysregulation of the cell cycle and DNA replication

Neuro-Oncology Advances(2024)10.1093/noajnl/vdae104

N/A

0DataRank · unranked

1 citations

Nanyun Tang, Yue Hao, Matthew Lee, Sen Peng, Rita Bybee +10 more

Cardiomyocyte-derived circulating extracellular vesicles allow a non-invasive liquid biopsy of myocardium in health and disease

medRxiv(2024)10.1101/2024.09.19.24314009

N/A

0DataRank · unranked

6 citations

Priyanka Gokulnath, Guoping Li, Elizabeth Hutchins, Bessie Meechoovet, Quanhu Sheng +36 more

Re-expression of SMARCA4/BRG1 in Small Cell Carcinoma of Ovary, Hypercalcemic Type (SCCOHT) promotes an epithelial-like gene signature through an AP-1-dependent mechanism

UNC Libraries(2024)10.17615/1zdq-fp60

N/A

0DataRank · unranked

0 citations

Jessica D. Lang, Jesse R. Raab, Shane Colborne, Joel S. Parker, Vinh Nguyen +18 more

A hypoxia-responsive tRNA-derived small RNA confers renal protection through RNA autophagy

Science(2025)10.1126/science.adp5384

N/A

0DataRank · unranked

21 citations

Lingfei Sun, Cuiyan Xin, Hao Tian, Prakash Kharel, Aidan C. Manning +31 more

miR-142 deficit in T cells during blast crisis promotes chronic myeloid leukemia immune escape

Nature Communications(2025)10.1038/s41467-025-56383-y

N/A

0DataRank · unranked

4 citations

Dandan Zhao, Yongfang Xu, Yi Zhang, Min-Hsuan Chen, Khyatiben V. Pathak +24 more

STX4 Is Indispensable for Mitochondrial Homeostasis in Skeletal Muscle

Journal of Cachexia Sarcopenia and Muscle(2025)10.1002/jcsm.70113

N/A

0DataRank · unranked

3 citations

Rekha Balakrishnan, Erika M. McCown, Karla E. Merz, Chun‐Xue Zhou, Elizabeth Bloom‐Saldana +10 more

Pharmacological activity of OST-01, a natural product from baccharis coridifolia, on breast cancer cells

Journal of Hematology & Oncology(2025)10.1186/s13045-025-01668-4

N/A

0DataRank · unranked

5 citations

Dinh Hoa Hoang, Melissa Valerio, Khyatiben V. Pathak, William Graff, Alexis LeVee +10 more

Single‐Cell Analysis of L‐Myc Expressing Neural Stem Cells and Their Extracellular Vesicles Revealed Distinct Progenitor Populations With Neurogenic Potential

Journal of Extracellular Biology(2025)10.1002/jex2.70095

N/A

0DataRank · unranked

1 citations

Yate‐Ching Yuan, Nathaniel P. Hansen, Isabella Vasquez, Nan Jiang, Alejandra Velazquez Ojeda +15 more

Super-enhancers and efficacy of triptolide in small cell carcinoma of the ovary hypercalcemic type

iScience(2025)10.1016/j.isci.2025.111770

N/A

0DataRank · unranked

2 citations

William Selleck, Shawn Striker, Nicolle A. Hipschman, Rochelle Kofman, Anthony N. Karnezis +14 more

Targeting RNA modification and mitochondrial metabolism cross talk in leukemic stem cells with CDK7 inhibitor TGN-1062

Blood Advances(2025)10.1182/bloodadvances.2024014225

N/A

0DataRank · unranked

0 citations

Leying Zhang, Mohan R. Kaadige, Melissa Valerio, Dinh Hoa Hoang, Trason Thode +17 more

Correction: AOH1996 targets mitochondrial dynamics and metabolism in leukemic stem cells via mitochondrial PCNA inhibition

Experimental Hematology and Oncology(2025)10.1186/s40164-025-00650-7

N/A

0DataRank · unranked

0 citations

Melissa Valerio, Jia Feng, Long Gu, Dinh Hoa Hoang, Amanda Blackmon +13 more

Hepatic steatosis in postmenopausal women is characterized by distinct serum extracellular vesicle proteomic signatures

Research Square(2025)10.21203/rs.3.rs-7293767/v1

N/A

0DataRank · unranked

0 citations

Brooke Lovell, Siobán D. Harlow, Carrie Karvonen‐Gutierrez, Michelle M. Hood, Ignazio S. Piras +7 more

Immunometabolic determinants of long-term response in leukemia patients receiving CD19 CAR T cell therapy

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.23.684261

N/A

0DataRank · unranked

0 citations

Eric R. Haas, Jiaqi Wu, Bryan Garcia, Ryan Urak, Vibhuti Vyas +23 more

EXERCISE-MODULATED EXTRACELLULAR VESICLES (EVS) PROTEINS SUGGEST INFLAMMATORY RESOLUTION IN LONG COVID

CHEST Journal(2025)10.1016/j.chest.2025.07.3648

N/A

0DataRank · unranked

0 citations

Nathaniel Hansen, Ritin Sharma, Melissa Martinez, Chiara Gattoni, Patrick Pirrotte +2 more

Associations of glyphosate and aminomethylphosphonic acid (AMPA) concentrations with birth outcomes in pregnant women from the Midwestern U.S.

International Journal of Hygiene and Environmental Health(2025)10.1016/j.ijheh.2025.114733

N/A

0DataRank · unranked

0 citations

Maria E Cinzori, Brad A. Ryva, Nicole M. Talge, Khyatiben V. Pathak, Brooke Lovell +4 more

Molecular profiling of glioblastoma-derived extracellular vesicles identifies small nucleolar RNAs as candidate liquid biomarkers for radiation- induced senescence

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.12.693499

N/A

0DataRank · unranked

0 citations

Nathaniel Hansen, Priya Digumarti, Nanyun Tang, Karen Fink, George J. Snipes +3 more

A Multifunctional LNA Oligonucleotide-Based Strategy Blocks AR Expression and Transactivation Activity in PCa Cells

Molecular Therapy — Nucleic Acids(2020)10.1016/j.omtn.2020.10.032

N/A

0DataRank · unranked

8 citations

Xiaowei Zhang, Jacqueline Rüger, Jessica Alluin, Ritin Sharma, Patrick Pirrotte +10 more

Bisbee: A proteomics validated analysis package for detecting differential splicing, identifying splice outliers, and predicting splice event protein effects

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.13.250167

N/A

0DataRank · unranked

0 citations

Apurva M. Hegde, Jessica D. Lang, Elizabeth A. Raupach, Christophe Legendre, Winnie S. Liang +8 more

Improved methods for RNAseq-based alternative splicing analysis

Scientific Reports(2021)10.1038/s41598-021-89938-2

N/A

0DataRank · unranked

44 citations

Apurva M. Hegde, Jessica D. Lang, Elizabeth A. Raupach, Vinodh Narayanan, Matt Huentelman +13 more

Defining the Caprin-1 interactome in unstressed and stressed conditions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.06.425453

N/A

0DataRank · unranked

5 citations

Asmita Ghosh, Chelsea Tran, Walters Aji Tebung, Hadjara Sidibé, Krystine Garcia‐Mansfield +6 more

Pathogenesis of Alzheimer’s disease: Involvement of the Choroid Plexus

medRxiv(2021)10.1101/2021.07.29.21260696

N/A

0DataRank · unranked

5 citations

Isaac G. Onyango, Stanislav Katina, Dušan Holub, Markéta Nezvedová, Durga Jha +35 more

Glyphosate infiltrates the brain and increases pro-inflammatory cytokine TNFα: implications for neurodegenerative disorders

Journal of Neuroinflammation(2022)10.1186/s12974-022-02544-5

N/A

0DataRank · unranked

81 citations

Khyatiben V. Pathak, Wendy Winslow, Ignazio S. Piras, Jennifer White, Ritin Sharma +4 more

Disruption of dNTP homeostasis by ribonucleotide reductase hyperactivation overcomes AML differentiation blockade

Blood(2022)10.1182/blood.2021015108

N/A

0DataRank · unranked

30 citations

Xin He, Lei Zhang, Haojie Dong, Feiteng Huang, Jie Xian +24 more

The autism-associated gene SYNGAP1 regulates human cortical neurogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.10.491244

N/A

0DataRank · unranked

7 citations

Ashley Del Dosso, Tiantian Xu, Tuan Nguyen, Brent Wilkinson, Negar Hosseini +15 more

The autism-associated gene SYNGAP1 regulates human cortical neurogenesis

Research Square(2022)10.21203/rs.3.rs-1610145/v1

N/A

0DataRank · unranked

2 citations

Marcella Birtele, Ashley Del Dosso, Tiantian Xu, Tuan Nguyen, Brent Wilkinson +9 more

CDK9 inhibition induces epigenetic reprogramming revealing strategies to circumvent resistance in lymphoma

Molecular Cancer(2023)10.1186/s12943-023-01762-6

N/A

0DataRank · unranked

36 citations

Nur Bruss, Duanchen Sun, Edward C. Dominguez, Daniel J. Coleman, Tingting Liu +9 more

Proteomics and mathematical modeling of longitudinal CSF differentiates fast versus slow ALS progression

Annals of Clinical and Translational Neurology(2023)10.1002/acn3.51890

N/A

0DataRank · unranked

23 citations

Krystine Garcia‐Mansfield, Antonio Pompeiano, Jiyan An, Victoria David‐Dirgo, Ritin Sharma +9 more

Palmitic Acid–Induced Long Noncoding RNA PARAIL Regulates Inflammation via Interaction With RNA-Binding Protein ELAVL1 in Monocytes and Macrophages

Arteriosclerosis Thrombosis and Vascular Biology(2023)10.1161/atvbaha.122.318536

N/A

0DataRank · unranked

21 citations

Marpadga A. Reddy, Sadhan Das, Vishnu Amaram Samara, Maryam Abdollahi, Suchismita Dey +7 more

Urinary glyphosate and AMPA levels in a cross-sectional study of postmenopausal women: Associations with organic eating behavior and dietary intake

International Journal of Hygiene and Environmental Health(2023)10.1016/j.ijheh.2023.114211

N/A

0DataRank · unranked

13 citations

Xiyue Liao, Weilin Huang, Danielle Forman, Alexis Kim, Argyrios Ziogas +10 more

Landscape of super-enhancers in small cell carcinoma of the ovary, hypercalcemic type and efficacy of targeting with natural product triptolide

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.08.556863

N/A

0DataRank · unranked

2 citations

William Selleck, Shawn Striker, Nicolle A. Hipschman, Rochelle Kofman, Anthony N. Karnezis +14 more

Patrick Pirrotte

Indexed papers

Top data-sharing exemplar

Papers