🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Fostering Data Sharing

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Collin Tokheim

Collin Tokheim

Johns Hopkins University

ORCID: 0000-0003-1395-5378

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

7.0Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

Cell(2018)10.1016/j.cell.2018.03.033

Top 3%

6.4DataRank

Top 3%447 citations

Matthew H. Bailey, Hoifung Poon, Vesteinn Thorsson, Antonio Colaprico, Andreas Bender +883 more

Papers

Driven by 13 papers — median percentile 68. Top paper: “Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics”.

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

Cell(2018)10.1016/j.cell.2018.03.033

Top 3%

6.4DataRank

Top 3%447 citations

Matthew H. Bailey, Hoifung Poon, Vesteinn Thorsson, Antonio Colaprico, Andreas Bender +883 more

Therapeutically Increasing MHC-I Expression Potentiates Immune Checkpoint Blockade

Cancer Discovery(2021)10.1158/2159-8290.cd-20-0812

N/A

0.848DataRank · unranked

284 citations

Wubing Zhang, Xiaoqing Wang, Peng Jiang, Nicole Traugh, Ziyi Li +28 more

Determinants of transcription factor regulatory range

Nature Communications(2020)10.1038/s41467-020-16106-x

N/A

0.681DataRank · unranked

93 citations

Rongbin Zheng, Collin Tokheim, Xin Dong, Jing‐Yu Fan, Changxin Wan +6 more

Cross-Site Concordance Evaluation of Tumor DNA and RNA Sequencing Platforms for the CIMAC-CIDC Network

Clinical Cancer Research(2020)10.1158/1078-0432.ccr-20-3251

Top 32%

0.613DataRank

Top 32%15 citations

Jingxin Fu, Carrie Cibulskis, Aashna Jhaveri, Curtis Gumbs, Biswajit Das +41 more

Machine Learning Modeling of Protein-Intrinsic Features Predicts Tractability of Targeted Protein Degradation

Genomics Proteomics & Bioinformatics(2022)10.1016/j.gpb.2022.11.008

N/A

0.593DataRank · unranked

51 citations

Shourya S. Roy Burman, Jiaye Chen, Katherine A. Donovan, Yang Cao, Chelsea Shu +9 more

Clonal tracing reveals diverse patterns of response to immune checkpoint blockade

Genome biology(2020)10.1186/s13059-020-02166-1

N/A

0.524DataRank · unranked

32 citations

Xiaoqing Wang, Xihao Hu, Peng Jiang, Ziyi Li, Nicole Traugh +21 more

Machine learning modeling of protein-intrinsic features predicts tractability of targeted protein degradation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.27.462040

N/A

0.430DataRank · unranked

5 citations

Shourya S. Roy Burman, Jiaye Chen, Katherine A. Donovan, Yang Cao, Boning Zhang +7 more

700 Increasing MHC-I expression to potentiate immune checkpoint blockade therapy

Regular and Young Investigator Award Abstracts(2021)10.1136/jitc-2021-sitc2021.700

N/A

0.104DataRank · unranked

1 citations

Wubing Zhang, Xiaoqing Wang, Peng Jiang, Nicole Traugh, Ziyi Li +28 more

Data from High-Throughput Prediction of MHC Class I and II Neoantigens with MHCnuggets

(2023)10.1158/2326-6066.c.6550177.v1

N/A

0DataRank · unranked

0 citations

Rohit Bhattacharya, Justin K. Huang, I.K. Ashok Sivakumar, Collin Tokheim, Lily Zheng +10 more

In Vivo CRISPR Screens Identify E3 Ligase Cop1 as a Modulator of Macrophage Infiltration and Cancer Immunotherapy Target

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.09.418012

N/A

0DataRank · unranked

1 citations

Collin Tokheim, Binbin Wang, Shengqing Gu, Qin Tang, Yihao Li +16 more

In vivo CRISPR screens identify the E3 ligase Cop1 as a modulator of macrophage infiltration and cancer immunotherapy target

Cell(2021)10.1016/j.cell.2021.09.006

N/A

0DataRank · unranked

198 citations

Collin Tokheim, Shengqing Gu, Binbin Wang, Qin Tang, Yihao Li +17 more

Systematic characterization of mutations altering protein degradation in human cancers

Molecular Cell(2021)10.1016/j.molcel.2021.01.020

N/A

0DataRank · unranked

86 citations

Xiaoqing Wang, Richard T. Timms, Boning Zhang, Elijah L. Mena, Binbin Wang +8 more

Data from The Genetic Evolution of Treatment-Resistant Cutaneous, Acral, and Uveal Melanomas

(2023)10.1158/1078-0432.c.6530294

Top 100%

0DataRank

Top 100%0 citations

Evan J. Lipson, Jody E. Hooper, Amanda Zucker, Jungeui Hong, Craig M. Bielski +17 more