Felice C. Lightstone

Biochemistry, Genetics and Molecular BiologyComputer ScienceMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 27 papers. Top paper: “Deep generative molecular design reshapes drug discovery”.

Deep generative molecular design reshapes drug discovery

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100794

N/A

0.850DataRank · unranked

288 citations

Fei Wang, Yuan Luo, Seung-Gu Kang, Jian Tang, Felice C. Lightstone +5 more

Interpretable artificial intelligence and exascale molecular dynamics simulations to reveal kinetics: Applications to Alzheimer's disease

Current Opinion in Structural Biology(2021)10.1016/j.sbi.2021.09.001

N/A

0.804DataRank · unranked

20 citations

Gloria Sheynkman, Felice C. Lightstone, Ruth Nussinov, Feixiong Cheng, William R. Martin

Machine learning–driven multiscale modeling reveals lipid-dependent dynamics of RAS signaling proteins

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2113297119

N/A

0.675DataRank · unranked

89 citations

Chris Neale, Timothy S. Carpenter, Rebika Shrestha, César A. López, Timothy H. Tran +37 more

Machine-learning-based dynamic-importance sampling for adaptive multiscale simulations

Nature Machine Intelligence(2021)10.1038/s42256-021-00327-w

N/A

0.553DataRank · unranked

39 citations

Timothy S. Carpenter, Helgi I. Ingólfsson, Gautham Dharuman, Piyush Karande, Shusen Liu +7 more

Generalizable coordination of large multiscale workflows

OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)(2021)10.1145/3458817.3476210

N/A

0.500DataRank · unranked

27 citations

Francesco Di Natale, Joseph Y. Moon, Xiaohua Zhang, Joseph R. Chavez, Fikret Aydin +13 more

The confluence of machine learning and multiscale simulations

Current Opinion in Structural Biology(2023)10.1016/j.sbi.2023.102569

N/A

0.494DataRank · unranked

26 citations

Fikret Aydin, Timothy S. Carpenter, Felice C. Lightstone, Peer‐Timo Bremer, Helgi I. Ingólfsson +3 more

Revealing the mechanism of action of a first-in-class covalent inhibitor of KRASG12C (ON) and other functional properties of oncogenic KRAS by 31P NMR

Journal of Biological Chemistry(2024)10.1016/j.jbc.2024.105650

N/A

0.464DataRank · unranked

21 citations

Jun Pei, Yue Yang, Marcin Dyba, Brian D. Smith, Dana Rabara +11 more

Development of a CNS-permeable reactivator for nerve agent exposure: an iterative, multi-disciplinary approach

Scientific Reports(2021)10.1038/s41598-021-94963-2

N/A

0.457DataRank · unranked

20 citations

Michael Malfatti, Nicholas A. Be, Heather A. Enright, Saphon Hok, C. Linn Cadieux +8 more

Blocking C-terminal processing of KRAS4b via a direct covalent attack on the CaaX-box cysteine

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2410766122

N/A

0.292DataRank · unranked

6 citations

Yue Yang, Alok K. Sharma, David M. Turner, Caroline J. DeHart, Hazem Abdelkarim +29 more

Evaluating point-prediction uncertainties in neural networks for protein-ligand binding prediction

Artificial Intelligence Chemistry(2023)10.1016/j.aichem.2023.100004

N/A

0.241DataRank · unranked

4 citations

Jonathan Allen, Kevin McLoughlin, Da Shi, Brian J. Bennion, Xiaohua Zhang +2 more

An In Vitro BRAF Activation Assay Elucidates Molecular Mechanisms Driving Disassembly of the Autoinhibited BRAF State

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.19.671159

N/A

0.104DataRank · unranked

1 citations

David Durrant, Matthew Drew, Suzanne I. Sandin, Juliana A. Martinez Fiesco, Xiaohua Zhang +21 more

Comprehensive characterization of protein-protein interaction network perturbations by human disease mutations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.18.302588

N/A

0DataRank · unranked

0 citations

Junfei Zhao, Yang Wang, Weiqiang Lü, Zehui Liu, Yadi Zhou +19 more

Exploring CRD mobility during RAS/RAF engagement at the membrane

Biophysical Journal(2022)10.1016/j.bpj.2022.06.035

N/A

0DataRank · unranked

28 citations

César A. López, Chris Neale, Que N. Van, Timothy S. Carpenter, Francesco Di Natale +25 more

Using Machine Learning to Predict Membrane Protein States Based on their Lipid Environment

Biophysical Journal(2020)10.1016/j.bpj.2019.11.2746

N/A

0DataRank · unranked

0 citations

Gautham Dharuman, Timothy S. Carpenter, Helgi I. Ingólfsson, Brian C. Van Essen, James N. Glosli +2 more

Dynamic density functional theory of multicomponent cellular membranes

Physical Review Research(2023)10.1103/physrevresearch.5.013080

N/A

0DataRank · unranked

8 citations

Tomas Oppelstrup, Timothy S. Carpenter, Helgi I. Ingólfsson, Michael P. Surh, Felice C. Lightstone +2 more

Membrane interactions of the globular domain and the hypervariable region of KRAS4b define its unique diffusion behavior

eLife(2020)10.7554/elife.47654

N/A

0DataRank · unranked

29 citations

De Chen, Yue Yang, Prabhakar R. Gudla, John Columbus, Karen M. Worthy +13 more

Data from The Use of One-Bead One-Compound Combinatorial Library Technology to Discover High-Affinity αvβ3 Integrin and Cancer Targeting Arginine-Glycine-Aspartic Acid Ligands with a Built-in Handle

(2023)10.1158/1535-7163.c.6531486.v1

N/A

0DataRank · unranked

0 citations

Yan Wang, Edmond Y. Lau, Juntao Luo, Nianhuan Yao, Changying Shi +9 more

Data from The Use of One-Bead One-Compound Combinatorial Library Technology to Discover High-Affinity αvβ3 Integrin and Cancer Targeting Arginine-Glycine-Aspartic Acid Ligands with a Built-in Handle

(2023)10.1158/1535-7163.c.6531486

N/A

0DataRank · unranked

0 citations

Yan Wang, Edmond Y. Lau, Juntao Luo, Nianhuan Yao, Changying Shi +9 more

Targeting Ras-, Rho-, and Rab-family GTPases via a conserved cryptic pocket

Cell(2024)10.1016/j.cell.2024.08.017

N/A

0DataRank · unranked

56 citations

Victoria Bowcut, Micah C. Fernando, Yue Yang, Lawrence Zhu, Meredith L. Jenkins +12 more

Atomistic Characterization of Gramicidin Channel Formation

Journal of Chemical Theory and Computation(2020)10.1021/acs.jctc.0c00989

N/A

0DataRank · unranked

19 citations

Stewart He, William F. Bennett, Camille Bilodeau, Olaf S. Andersen, Felice C. Lightstone +2 more

Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane

Communications Biology(2024)10.1038/s42003-024-05916-0

N/A

0DataRank · unranked

13 citations

Timothy S. Carpenter, Que N. Van, Constance Agamasu, Marco Tonelli, Fikret Aydin +15 more

Generating Protein Structures for Pathway Discovery Using Deep Learning

Journal of Chemical Theory and Computation(2024)10.1021/acs.jctc.4c00816

N/A

0DataRank · unranked

6 citations

Robert Stephany, Jeremy O. B. Tempkin, Cláudio Santiago, Fikret Aydin, Mark Heimann +10 more

In Silico Insights into Protein–Protein Interaction Disruptive Mutations in the PCSK9-LDLR Complex

International Journal of Molecular Sciences(2020)10.3390/ijms21051550

N/A

0DataRank · unranked

21 citations

Felice C. Lightstone, Feixiong Cheng, William R. Martin

An in vitro BRAF activation assay elucidates molecular mechanisms driving disassembly of the autoinhibited BRAF state

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2508169122

N/A

0DataRank · unranked

6 citations

David Durrant, Matthew Drew, Suzanne I. Sandin, Juliana A. Martinez Fiesco, Xiao‐Hua Zhang +21 more

Dynamics and lipid membrane coupling of the RAS-RAF complex revealed via multiscale simulations

Biophysical Journal(2025)10.1016/j.bpj.2025.08.020

N/A

0DataRank · unranked

2 citations

Fikret Aydin, Chris Neale, Que N. Van, Xiaohua Zhang, Harsh Bhatia +35 more

Enhanced Exploration of Protein Conformational Space through Integration of Ultra-Coarse-Grained Models to Multiscale Workflows

The Journal of Physical Chemistry B(2025)10.1021/acs.jpcb.4c08622

N/A

0DataRank · unranked

2 citations

Konstantia Georgouli, Loïc Pottier, Tomas Oppelstrup, Timothy S. Carpenter, Jeremy O. B. Tempkin +6 more

Capturing Biologically Complex Tissue-Specific Membranes at Different Levels of Compositional Complexity

The Journal of Physical Chemistry B(2020)10.1021/acs.jpcb.0c03368

N/A

0DataRank · unranked

70 citations

Harsh Bhatia, Talia Zeppelin, William F. Bennett, Kristy A. Carpenter, Pin‐Chia Hsu +6 more