Avrum Spira

Boston University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.6Author DataRank

Indexed papers

12in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 12 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.03.053

Top 4%

5.6DataRank

Top 4%609 citations

Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer E. Rood +92 more

Papers

Driven by 36 papers — median percentile 0. Top paper: “The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution”.

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.03.053

Top 4%

5.6DataRank

Top 4%609 citations

Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer E. Rood +92 more

Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity

Nature Communications(2021)10.1038/s41467-021-24467-0

N/A

2.0DataRank · unranked

43 citations

Nichelle I. Winters, Mei-i Chung, Chitra Joseph, Austin J. Gutierrez, Arun C. Habermann +67 more

SnFFPE-Seq: towards scalable single nucleus RNA-Seq of formalin-fixed paraffin-embedded (FFPE) tissue

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.25.505257

N/A

1.3DataRank · unranked

28 citations

Alexandre Melnikov, Cristin McCabe, Eugene Drokhlyansky, Nicholas Van Wittenberghe, Emma M. Magee +7 more

Distinguishing Smoking-Related Lung Disease Phenotypes Via Imaging and Molecular Features

CHEST Journal(2020)10.1016/j.chest.2020.08.2115

N/A

0.776DataRank · unranked

13 citations

Samuel Y. Ash, Fenghai Duan, Ke Xu, Justin Romanoff, Helga S. Marques +23 more

Resolving the Spatial and Cellular Architecture of Lung Adenocarcinoma by Multiregion Single-Cell Sequencing

Cancer Discovery(2021)10.1158/2159-8290.cd-20-1285

N/A

0.737DataRank · unranked

135 citations

Guangchun Han, Warapen Treekitkarnmongkol, Kieko Hara, Patrick M. Brennan, Minghao Dang +35 more

Single-molecule genome-wide mutation profiles of cell-free DNA for non-invasive detection of cancer

Nature Genetics(2023)10.1038/s41588-023-01446-3

N/A

0.633DataRank · unranked

67 citations

Dimitrios Mathios, Zachariah H. Foda, Akshaya V. Annapragada, Jamie E. Medina, Vilmos Adleff +15 more

Transcriptomic changes in the nasal epithelium associated with diesel engine exhaust exposure

Environment International(2020)10.1016/j.envint.2020.105506

N/A

0.510DataRank · unranked

29 citations

Sean Corbett, Yuxin Zheng, Roel Vermeulen, Yufei Dai, Wei Hu +23 more

Spatial and multiomics analysis of human and mouse lung adenocarcinoma precursors reveals TIM-3 as a putative target for precancer interception

Cancer Cell(2025)10.1016/j.ccell.2025.04.003

N/A

0.505DataRank · unranked

28 citations

Pingjun Chen, Muhammad Aminu, Jiànróng Lǐ, Junya Fujimoto, Yanhua Tian +47 more

Low oxygen saturation during sleep reduces CD1D and RAB20 expressions that are reversed by CPAP therapy

EBioMedicine(2020)10.1016/j.ebiom.2020.102803

N/A

0.472DataRank · unranked

10 citations

Ruitong Li, Roby Joehanes, Honghuang Lin, Adam C. Gower, Heming Wang +16 more

Convergence of YAP/TAZ, TEAD and TP63 activity is associated with bronchial premalignant severity and progression

Journal of Experimental & Clinical Cancer Research(2023)10.1186/s13046-023-02674-5

N/A

0.470DataRank · unranked

22 citations

Andrew Tilston-Lünel, Justice Simonetti, Julia Hicks‐Berthet, Adeline Matschulat, Roxana Pfefferkorn +7 more

Aberrant epithelial polarity cues drive the development of precancerous airway lesions

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2019282118

N/A

0.464DataRank · unranked

21 citations

Sarah A. Mazzilli, Nathan Kingston, Aleksander D. Szymaniak, Julia Hicks‐Berthet, Joseph G. Kern +8 more

Multimodal spatial-omics reveal co-evolution of alveolar progenitors and proinflammatory niches in progression of lung precursor lesions

Cancer Cell(2025)10.1016/j.ccell.2025.10.004

N/A

0.457DataRank · unranked

20 citations

Ansam Sinjab, Yibo Dai, Warapen Treekitkarnmongkol, Sujuan Yang, Lorena I. Gomez Bolanos +44 more

Resolving the spatial and cellular architecture of lung adenocarcinoma by multi-region single-cell sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.04.283739

N/A

0.442DataRank · unranked

18 citations

Guangchun Han, Warapen Treekitkarnmongkol, Kieko Hara, Patrick M. Brennan, Minghao Dang +36 more

Bronchial gene expression signature associated with rate of subsequent FEV1 decline in individuals with and at risk of COPD

Thorax(2021)10.1136/thoraxjnl-2019-214476

N/A

0.434DataRank · unranked

17 citations

Alen Faiz, Maarten van den Berge, Wim Timens, Pieter S. Hiemstra, Kristopher Clark +9 more

Single-Cell Expression Landscape of SARS-CoV-2 Receptor ACE2 and Host Proteases in Normal and Malignant Lung Tissues from Pulmonary Adenocarcinoma Patients

Cancers(2021)10.3390/cancers13061250

N/A

0.385DataRank · unranked

12 citations

Ansam Sinjab, Kieko Hara, Warapen Treekitkarnmongkol, Patrick M. Brennan, Kyle Chang +26 more

Integrative genetic and genomic networks identify microRNA associated with COPD and ILD

Scientific Reports(2023)10.1038/s41598-023-39751-w

N/A

0.312DataRank · unranked

7 citations

Carly B. Garrison, Lingqi Luo, Gang Liu, Daniel G. Taub, Xiao‐Jun Ji +13 more

Single-cell analysis of human lung epithelia reveals concomitant expression of the SARS-CoV-2 receptor ACE2 with multiple virus receptors and scavengers in alveolar type II cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.16.045617

N/A

0.292DataRank · unranked

6 citations

Ansam Sinjab, Warapen Treekitkarnmongkol, Patrick M. Brennan, Kieko Hara, Kyle Chang +27 more

Single-cell characterization of subsolid and solid lesions in the lung adenocarcinoma spectrum

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.25.424416

N/A

0.165DataRank · unranked

2 citations

Linh M. Tran, EPY Fung, William D. Wallace, Ashley E. Prosper, Gregory A. Fishbein +16 more

Archetype Analysis of Lung Adenocarcinoma Premalignancy Links Heterogeneity in Premalignant Lesions to Diverging Features of Invasive Disease

Molecular Cancer Research(2026)10.1158/1541-7786.mcr-25-1093

N/A

0DataRank · unranked

0 citations

Linh M. Tran, Kostyantyn Krysan, Yohana Kefella, Lingge Yu, Gregory A. Fishbein +16 more

Supplementary Table 3 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524413

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524407

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 1 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524422.v1

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 4 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524410

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Biomarkers for Lung Cancer Screening and Detection

Cancer Epidemiology Biomarkers & Prevention(2020)10.1158/1055-9965.epi-20-0865

N/A

0DataRank · unranked

50 citations

David Sidransky, Avrum Spira, Samir M. Hanash, Edwin J. Ostrin

Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524419.v1

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

Figshare10.1158/1940-6207.22524407.v1

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Pathologic and gene expression comparison of CT- screen detected and routinely detected stage I/0 lung adenocarcinoma in NCCN risk-matched cohorts.

Cancer Treatment and Research Communications(2021)10.1016/j.ctarc.2021.100486

N/A

0DataRank · unranked

9 citations

Jiarui Zhang, Travis Sullivan, Xingyi Shi, Jacob Sands, Shawn M. Regis +10 more

Integrative genetic and genomic networks identify microRNA associated with COPD and ILD

medRxiv(2022)10.1101/2022.08.07.22278496

N/A

0DataRank · unranked

0 citations

Carly B. Garrison, Lingqi Luo, Gang Liu, Daniel G. Taub, Xiao‐Jun Ji +13 more

Contributors

Genomic and Personalized Medicine(2009)10.1016/b978-0-12-369420-1.00122-0

N/A

0DataRank · unranked

0 citations

Matthew L. Anderson, Felicita Andreotti, Brian H. Annex, Anthony Antonellis, Dmitri Artemov +272 more

Single-Cell Characterization of Pulmonary Nodules Implicates Suppression of Immunosurveillance across Early Stages of Lung Adenocarcinoma

Cancer Research(2023)10.1158/0008-5472.can-23-0128

N/A

0DataRank · unranked

20 citations

Linh M. Tran, Ramin Salehi‐Rad, Raymond J. Lim, Camelia Dumitras, Eileen Fung +19 more

An atlas of epithelial cell states and plasticity in lung adenocarcinoma

Nature(2024)10.1038/s41586-024-07113-9

N/A

0DataRank · unranked

163 citations

Ansam Sinjab, Zahraa Rahal, Anne M. Lynch, Warapen Treekitkarnmongkol, Yuejiang Liu +33 more

Epithelial miR-149-5p up-regulation is associated with immune evasion in progressive bronchial premalignant lesions

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.636307

N/A

0DataRank · unranked

2 citations

David Chiu, RM Pfefferkorn, Yohana Kefella, Eleanor Kane, Víctor Emanuel Reyes-Ortíz +15 more

Supplementary Table 1 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524422

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 9 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524395

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524419

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Supplementary Table 7 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

10.1158/1940-6207.22524401

Top 100%

0DataRank

Top 100%0 citations

Jessica Vick, Frank Schembri, Christina Anderlind, Adam Gower, Joshua Campbell +10 more

Avrum Spira

Indexed papers

Top data-sharing exemplar

Papers