🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jyoti Shetty

National Cancer Institute

ORCID: 0000-0003-1496-4057
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.0Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00993-6
Top 8%
2.7DataRank
Top 8%153 citations

Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan +88 more

Papers

Driven by 17 papers — median percentile 88. Top paper: “Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing”.

Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00994-5
N/A
3.8DataRank · unranked
215 citations

Luyao Ren, Zhong Chen, Li Tai Fang, Yongmei Zhao, Justin Lack +85 more

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00993-6
Top 8%
2.7DataRank
Top 8%153 citations

Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan +88 more

Whole genome and exome sequencing reference datasets from a multi-center and cross-platform benchmark study

Scientific Data(2021)10.1038/s41597-021-01077-5
Top 12%
1.7DataRank
Top 12%60 citations

Li Tai Fang, Tsai-Wei Shen, Sulbha Choudhari, Keyur Talsania, Xiongfong Chen +33 more

Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies

Genome biology(2022)10.1186/s13059-022-02816-6
N/A
1.3DataRank · unranked
47 citations

Tsai-Wei Shen, Xiongfong Chen, Erich Jaeger, Zhipan Li, Zhong Chen +34 more

Whole Genome and Exome Sequencing Reference Datasets from A Multi-center and Cross-platform Benchmark Study

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.27.433136
Top 33%
0.603DataRank
Top 33%10 citations

Li Tai Fang, Tsai-Wei Shen, Sulbha Choudhari, Keyur Talsania, Xiongfong Chen +31 more

Tumor biology and immune infiltration define primary liver cancer subsets linked to overall survival after immunotherapy

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101052
N/A
0.520DataRank · unranked
31 citations

Erica C. Pehrsson, Aiwu Ruth He, Lipika Goyal, Robin Kate Kelley, Hien Dang +26 more

Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing

Nature Biotechnology(2025)10.1038/s41587-025-02618-8
N/A
0.505DataRank · unranked
28 citations

Asher Bryant, Tanveer Ahmad, Byunggil Yoo, Sergey Aganezov, Anton Goretsky +36 more

Severus: accurate detection and characterization of somatic structural variation in tumor genomes using long reads

medRxiv(2024)10.1101/2024.03.22.24304756
N/A
0.470DataRank · unranked
22 citations

Asher Bryant, Tanveer Ahmad, Byunggil Yoo, Sergey Aganezov, Anton Goretsky +33 more

DeepSomatic: Accurate somatic small variant discovery for multiple sequencing technologies

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.16.608331
N/A
0.457DataRank · unranked
20 citations

Daniel E. Cook, Pi-Chuan Chang, Alexey Kolesnikov, Lucas Brambrink, Juan Carlos Mier +26 more

NF-κB Signaling Modulates miR-452-5p and miR-335-5p Expression to Functionally Decrease Epithelial Ovarian Cancer Progression in Tumor-Initiating Cells

International Journal of Molecular Sciences(2023)10.3390/ijms24097826
N/A
0.330DataRank · unranked
8 citations

Brittney S. Harrington, Emma Attar, Soumya Korrapati, Jyoti Shetty, Yongmei Zhao +5 more

Wakhan: reconstruction of chromosome-scale copy number profiles of tumor genomes with long-read sequencing

medRxiv(2025)10.64898/2025.12.11.25342098
N/A
0DataRank · unranked
0 citations

Ayse G. Keskus, Sergey Aganezov, Anton Goretsky, Isabel Rodriguez, Byunggil Yoo +23 more

Drugs Targeting Tumor-Initiating Cells Prolong Survival in a Post-Surgery, Post-Chemotherapy Ovarian Cancer Relapse Model

Cancers(2020)10.3390/cancers12061645
N/A
0DataRank · unranked
41 citations

Michelle Ozaki, Michael W. Caminear, Lídia Hernandez, Elizabeth Jordan, Nicholas J. Kalinowski +10 more

IKKα-deficient lung adenocarcinomas generate an immunosuppressive microenvironment by overproducing Treg-inducing cytokines

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2120956119
N/A
0DataRank · unranked
19 citations

Xin Li, Buyong Ma, Jami Willette‐Brown, Feng Zhu, Chengfei Jiang +11 more

UGDH promotes tumor-initiating cells and a fibroinflammatory tumor microenvironment in ovarian cancer

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.07.509566
N/A
0DataRank · unranked
2 citations

Rahul Kamdar, Franklin Ning, Soumya Korrapati, Michael W. Caminear, Lídia Hernandez +18 more

UGDH promotes tumor-initiating cells and a fibroinflammatory tumor microenvironment in ovarian cancer

Journal of Experimental & Clinical Cancer Research(2023)10.1186/s13046-023-02820-z
N/A
0DataRank · unranked
15 citations

Rahul Kamdar, Franklin Ning, Soumya Korrapati, Michael W. Caminear, Lídia Hernandez +18 more

Characterization of tumor evolution by functional clonality and phylogenetics in hepatocellular carcinoma

Communications Biology(2024)10.1038/s42003-024-06040-9
N/A
0DataRank · unranked
4 citations

Eric Slud, Doron Levy, Julián Candia, Anuradha Budhu, Marshonna Forgues +16 more

Optimization for Sequencing and Analysis of Degraded FFPE-RNA Samples

Journal of Visualized Experiments(2020)10.3791/61060
N/A
0DataRank · unranked
20 citations

Keyur Talsania, Bao Tran, Jyoti Shetty, Yongmei Zhao, Monika Mehta +1 more