Timothée Lionnet

Also affiliated with New York University, Brooklyn College

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 25 papers. Top paper: “A universal deep-learning model for zinc finger design enables transcription factor reprogramming”.

A universal deep-learning model for zinc finger design enables transcription factor reprogramming

Nature Biotechnology(2023)10.1038/s41587-022-01624-4

N/A

17.9DataRank · unranked

570 citations

Osama Abdin, Nader Alerasool, Manjunatha Kogenaru, April L. Mueller, Han Wen +16 more

Live-cell single particle imaging reveals the role of RNA polymerase II in histone H2A.Z eviction

eLife(2020)10.7554/elife.55667

N/A

2.2DataRank · unranked

84 citations

Vu Q. Nguyen, Sheng Liu, Jan Wiśniewski, Jee Min Kim, Xiaona Tang +11 more

Single‐cell transcriptomics identifies Gadd45b as a regulator of herpesvirus‐reactivating neurons

EMBO Reports(2021)10.15252/embr.202153543

N/A

0.854DataRank · unranked

26 citations

Kalanghad Puthankalam Srinivas, Shuoshuo Wang, Moses V. Chao, Timothée Lionnet, Ian Mohr +4 more

Three-dimensional chromatin landscapes in T cell acute lymphoblastic leukemia

Nature Genetics(2020)10.1038/s41588-020-0602-9

N/A

0.819DataRank · unranked

234 citations

Palaniraja Thandapani, Panagiotis Ntziachristos, Yohana Ghebrechristos, Sofia Nomikou, Charalampos Lazaris +16 more

Synthetic regulatory reconstitution reveals principles of mammalian Hox cluster regulation

Science(2022)10.1126/science.abk2820

N/A

0.604DataRank · unranked

55 citations

Milica Bulajić, Dylan P. Rahe, Emily Huang, Ran Brosh, Nicholas E. Mamrak +12 more

Live-cell single particle imaging reveals the role of RNA polymerase II in histone H2A.Z eviction

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.13.947119

N/A

0.381DataRank · unranked

8 citations

Vu Q. Nguyen, Sheng Liu, Jan Wiśniewski, Jee Min Kim, Xiaona Tang +11 more

RS-FISH: Precise, interactive, fast, and scalable FISH spot detection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.09.434205

N/A

0DataRank · unranked

21 citations

Laura Breimann, Marwan Zouinkhi, Leo F. Epstein, Klim Kolyvanov, Xi Long +4 more

Drug-induced adaptation along a resistance continuum in cancer cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.21.496830

N/A

0DataRank · unranked

23 citations

Maayan Baron, Maayan Pour, Benjamin R. King, Anjali Rao, Selim Mısırlıoğlu +10 more

The kinetic landscape of human transcription factors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.01.494187

N/A

0DataRank · unranked

7 citations

Nader Alerasool, Daniel Griffith, Alex S. Holehouse, Mikko Taipale, Timothée Lionnet +1 more

Spatiotemporal coordination of transcription preinitiation complex assembly in live cells

Molecular Cell(2021)10.1016/j.molcel.2021.07.022

N/A

0DataRank · unranked

125 citations

Anand Ranjan, Sheng Liu, Xiaona Tang, Yick Hin Ling, Jan Wiśniewski +8 more

Transcription machinery clustering by Integrator synchronizes histone gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.07.561364

N/A

0DataRank · unranked

7 citations

B. Park, Rina Fujiwara, Jeremy E. Wilusz, David S. Gilmour, Ruth Lehmann +2 more

Connecting Chromatin Structures to Gene Regulation Using Dynamic Polymer Simulations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.07.566032

N/A

0DataRank · unranked

6 citations

Tianxiao Zhao, Finnegan Clark, Sofia Nomikou, Aristotelis Tsirigos, Timothée Lionnet +1 more

Cellular adaptation to cancer therapy along a resistance continuum

Nature(2024)10.1038/s41586-024-07690-9

N/A

0DataRank · unranked

160 citations

Maayan Baron, Benjamin R. King, Jozef P. Bossowski, Alicia Bjornberg, Maayan Pour +16 more

Clonal evolution of the 3D chromatin landscape in patients with relapsed pediatric B-cell acute lymphoblastic leukemia

Nature Communications(2024)10.1038/s41467-024-51492-6

N/A

0DataRank · unranked

15 citations

Yohana Ghebrechristos, Nikki A. Evensen, Nina Murrell, Sylwia Jasinski, Talia H. Ostrow +8 more

The method in the madness: Transcriptional control from stochastic action at the single-molecule scale

Current Opinion in Structural Biology(2024)10.1016/j.sbi.2024.102873

N/A

0DataRank · unranked

13 citations

Timothée Lionnet, Peter H. Whitney

Single-molecule imaging of chromatin remodelers reveals role of ATPase in promoting fast kinetics of target search and dissociation from chromatin

eLife(2021)10.7554/elife.69387

N/A

0DataRank · unranked

74 citations

Pat Visanpattanasin, Vivian Jou, Sheng Liu, Xiaona Tang, Qinsi Zheng +6 more

Identifying in vivo genetic dependencies of melanocyte and melanoma development

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.22.586101

N/A

0DataRank · unranked

0 citations

Yilun Ma, Miranda V. Hunter, Jacob B Swanson, Nelly M. Cruz, Zhitao Ming +5 more

Reviewer #2 (Public Review): Connecting Chromatin Structures to Gene Regulation Using Dynamic Polymer Simulations

(2024)10.7554/elife.94738.1.sa0

N/A

0DataRank · unranked

0 citations

Finnegan Clark, Sofia Nomikou, Aristotelis Tsirigos, Timothée Lionnet, Yi Fu

Reviewer #2 (Public review): Identifying in vivo genetic dependencies of melanocyte and melanoma development

(2024)10.7554/elife.100257.1.sa1

N/A

0DataRank · unranked

0 citations

Yilun Ma, Miranda V Hunter, Jacob B Swanson, Zhitao Ming, Julia Xia +4 more

Identifying in vivo genetic dependencies of melanocyte and melanoma development

eLife(2024)10.7554/elife.100257

N/A

0DataRank · unranked

0 citations

Yilun Ma, Miranda V. Hunter, Jacob B Swanson, Nelly M. Cruz, Zhitao Ming +5 more

De novo assembly of RNA m6A modification factors into viral genome-associated nuclear bodies drives HCMV RNA accumulation

Cell Reports(2025)10.1016/j.celrep.2025.115826

N/A

0DataRank · unranked

1 citations

Chia-Ching Lin, Michael Cammer, Ebube D Emesom, Maaz Asher Khurram, Chris Boutell +5 more

Author response: Identifying in vivo genetic dependencies of melanocyte and melanoma development

(2025)10.7554/elife.100257.2.sa0

N/A

0DataRank · unranked

0 citations

Yilun Ma, Miranda V. Hunter, Jacob B Swanson, Nelly M. Cruz, Zhitao Ming +5 more

Identifying in vivo genetic dependencies of melanocyte and melanoma development

eLife(2025)10.7554/elife.100257.2

N/A

0DataRank · unranked

0 citations

Yilun Ma, Miranda V. Hunter, Jacob B Swanson, Nelly M. Cruz, Zhitao Ming +5 more

Identifying in vivo genetic dependencies of melanocyte and melanoma development

eLife(2025)10.7554/elife.100257.3

N/A

0DataRank · unranked

0 citations

Yilun Ma, Miranda V. Hunter, Jacob B Swanson, Nelly M. Cruz, Zhitao Ming +5 more

Connecting Chromatin Structures to Gene Regulation Using Dynamic Polymer Simulations

eLife(2024)10.7554/elife.94738

N/A

0DataRank · unranked

1 citations

Tianxiao Zhao, Finnegan Clark, Sofia Nomikou, Aristotelis Tsirigos, Timothée Lionnet +1 more