Soyeon Kim

Also affiliated with Ulsan College, University of Pittsburgh, Yonsei University, Asan Medical Center, Kyung Hee University, University of Ulsan, Stanford Medicine, Frontier Science & Technology Research Foundation, Inc., Korea Disease Control and Prevention Agency, Stanford University

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “3′-UTR Shortening Contributes to Subtype-Specific Cancer Growth by Breaking Stable ceRNA Crosstalk of Housekeeping Genes”.

3′-UTR Shortening Contributes to Subtype-Specific Cancer Growth by Breaking Stable ceRNA Crosstalk of Housekeeping Genes

Frontiers in Bioengineering and Biotechnology(2020)10.3389/fbioe.2020.00334

N/A

0.738DataRank · unranked

13 citations

Soyeon Kim, Yulong Bai, Brenda Diergaarde, Hyun Jung Park, Zhenjiang Fan

Expression Quantitative Trait Methylation Analysis Reveals Methylomic Associations With Gene Expression in Childhood Asthma

CHEST Journal(2020)10.1016/j.chest.2020.05.601

N/A

0.553DataRank · unranked

39 citations

Erick Forno, Rong Zhang, Hyun Jung Park, Zhongli Xu, Qi Yan +6 more

Transcriptome-wide and differential expression network analyses of childhood asthma in nasal epithelium

Journal of Allergy and Clinical Immunology(2020)10.1016/j.jaci.2020.02.005

N/A

0.529DataRank · unranked

33 citations

Rong Zhang, Yale Jiang, Soyeon Kim, Qi Yan, Zhao Ren +11 more

A genome-wide association study of severe asthma exacerbations in Latino children and adolescents

European Respiratory Journal(2020)10.1183/13993003.02693-2020

N/A

0.477DataRank · unranked

23 citations

Erick Forno, Esther Herrera‐Luis, Maria Pino‐Yanes, Cancan Qi, Raimon Rios +25 more

Deep neural network learning biological condition information refines gene-expression-based cell subtypes

Briefings in Bioinformatics(2023)10.1093/bib/bbad512

N/A

0.326DataRank · unranked

5 citations

Jie Sun, Henry Thorpe, Stephen Lee, Soyeon Kim, Hyun Jung Park +1 more

MOSES: a methylation-based gene association approach for unveiling environmentally regulated genes linked to a trait or disease

Clinical Epigenetics(2024)10.1186/s13148-024-01776-x

N/A

0.165DataRank · unranked

2 citations

Yidi Qin, Hyun Jung Park, Rebecca I. Caldino Bohn, Molin Yue, Zhongli Xu +4 more

Pathway information on methylation analysis using deep neural network (PROMINENT): An interpretable deep learning method with pathway prior for phenotype prediction using gene-level DNA methylation

Artificial Intelligence in Medicine(2025)10.1016/j.artmed.2025.103236

N/A

0.165DataRank · unranked

2 citations

Laizhi Zhang, Yidi Qin, Rebecca I. Caldino Bohn, Hyun Jung Park, Soyeon Kim

A framework for considering the risk‐benefit trade‐off in designing noninferiority trials using composite outcome approaches

Statistics in Medicine(2020)10.1002/sim.8777

N/A

0.104DataRank · unranked

1 citations

Ritesh Ramchandani, Sachiko Miyahara, Soyeon Kim, Grace Montepiedra

Deep neural networks with knockoff features identify nonlinear causal relations and estimate effect sizes in complex biological systems

GigaScience(2022)10.1093/gigascience/giad044

N/A

0DataRank · unranked

8 citations

Kate F. Kernan, Aditya Sriram, Panayiotis V. Benos, Scott Canna, Joseph A. Carcillo +3 more

scMAPA: Identification of cell-type–specific alternative polyadenylation in complex tissues

GigaScience(2022)10.1093/gigascience/giac033

N/A

0DataRank · unranked

6 citations

Yidi Qin, Zhenjiang Fan, Robert M. Morrison, Kyong Nyon Nam, Hassane M. Zarour +5 more

A cystic fibrosis lung disease modifier locus harbors tandem repeats associated with gene expression

medRxiv(2022)10.1101/2022.03.28.22272580

N/A

0DataRank · unranked

0 citations

Scott Mastromatteo, Cheng Wang, Jiafen Gong, Bhooma Thiruvahindrapuram, Wilson W. L. Sung +19 more

Refining empiric subgroups of pediatric sepsis using machine-learning techniques on observational data

Frontiers in Pediatrics(2023)10.3389/fped.2023.1035576

N/A

0DataRank · unranked

13 citations

Rebecca I. Caldino Bohn, Aditya Sriram, Kate F. Kernan, Joseph A. Carcillo, Soyeon Kim +2 more

The microRNA target site profile is a novel biomarker in the immunotherapy response

Frontiers in Oncology(2023)10.3389/fonc.2023.1225221

N/A

0DataRank · unranked

3 citations

Yujia Li, Yidi Qin, Xinshuo Yang, George C. Tseng, Soyeon Kim +2 more

Nasal epithelial gene expression and total IgE in children and adolescents with asthma

Journal of Allergy and Clinical Immunology(2023)10.1016/j.jaci.2023.09.014

N/A

0DataRank · unranked

12 citations

Erick Forno, Yidan Sun, Michelle L. Manni, Yueh Ying Han, Soyeon Kim +9 more

Cis- and trans-eQTM analysis reveals novel epigenetic and transcriptomic immune markers of atopic asthma in airway epithelium

Journal of Allergy and Clinical Immunology(2023)10.1016/j.jaci.2023.05.018

N/A

0DataRank · unranked

11 citations

Zhongli Xu, Erick Forno, Yidi Qin, Hyun Jung Park, Molin Yue +7 more

Methyl-TWAS: A powerful method for in silico transcriptome-wide association studies (TWAS) using long-range DNA methylation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.10.566586

N/A

0DataRank · unranked

0 citations

Yidi Qin, Hyun Jung Park, Molin Yue, Zhongli Xu, Erick Forno +3 more

Comparing single and multiple imputation strategies for harmonizing substance use data across HIV-related cohort studies

BMC Medical Research Methodology(2022)10.1186/s12874-022-01554-4

N/A

0DataRank · unranked

36 citations

Johnny Cheng-Han Lin, Amy Ragsdale, Soyeon Kim, Suzanne Siminski, Pamina M. Gorbach +1 more

Exposure to violence, chronic stress, nasal DNA methylation, and atopic asthma in children

medRxiv(2020)10.1101/2020.11.03.20225250

N/A

0DataRank · unranked

9 citations

Erick Forno, Andrés Cárdenas, Cancan Qi, Yueh‐Ying Han, Edna Acosta‐Pérez +12 more

Expression quantitative trait methylation analysis reveals methylomic associations with gene expression in childhood asthma

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.13.937391

N/A

0DataRank · unranked

4 citations

Erick Forno, Rong Zhang, Qi Yan, Nadia Boutaoui, Edna Acosta‐Pérez +4 more

Multi-omics colocalization with genome-wide association studies reveals a context-specific genetic mechanism at a childhood onset asthma risk locus

Genome Medicine(2021)10.1186/s13073-021-00967-y

N/A

0DataRank · unranked

47 citations

Atsushi Kato, Britney A. Helling, Catherine T. Stanhope, James E. Norton, Katherine A. Naughton +15 more

Exposure to violence, chronic stress, nasal DNA methylation, and atopic asthma in children

Pediatric Pulmonology(2021)10.1002/ppul.25372

N/A

0DataRank · unranked

38 citations

Erick Forno, Andrés Cárdenas, Cancan Qi, Yueh‐Ying Han, Edna Acosta‐Pérez +13 more

Causal inference using deep-learning variable selection identifies and incorporates direct and indirect causalities in complex biological systems

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.17.452800

N/A

0DataRank · unranked

1 citations

Kate F. Kernan, Panayiotis V. Benos, Scott Canna, Joseph A. Carcillo, Soyeon Kim +2 more

Derivation of four computable 24-hour pediatric sepsis phenotypes to facilitate personalized enrollment in early precise anti-inflammatory clinical trials

medRxiv(2021)10.1101/2021.12.02.21267016

N/A

0DataRank · unranked

0 citations

Kate F. Kernan, Zhenjiang Fan, Hyun Jung Park, Soyeon Kim, Scott Canna +20 more

The microRNA target site landscape is a novel molecular feature associating alternative polyadenylation with immune evasion activity in breast cancer

Briefings in Bioinformatics(2020)10.1093/bib/bbaa191

N/A

0DataRank · unranked

17 citations

Yulong Bai, Zhenjiang Fan, Brenda Diergaarde, George C. Tseng, Hyun Jung Park +1 more