Brenda M. Rubenstein

Physics and AstronomyMaterials ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 9 papers. Top paper: “High-throughput prediction of protein conformational distributions with subsampled AlphaFold2”.

High-throughput prediction of protein conformational distributions with subsampled AlphaFold2

Nature Communications(2024)10.1038/s41467-024-46715-9

N/A

0.797DataRank · unranked

202 citations

Jennifer Y. Cui, David C. Dalgarno, George P. Lisi, Brenda M. Rubenstein, Gabriel Monteiro da Silva

Defining the HIV Capsid Binding Site of Nucleoporin 153

mSphere(2022)10.1128/msphere.00310-22

N/A

0.410DataRank · unranked

7 citations

Jagdish Suresh Patel, Jordan Yang, Angela Crabtree, Brenda M. Rubenstein, Peik K. Lund-Andersen +3 more

LYRUS: A Machine Learning Model for Predicting the Pathogenicity of Missense Variants

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.10.443497

N/A

0.165DataRank · unranked

2 citations

Jordan Yang, Ece D. Gamsiz Uzun, Brenda M. Rubenstein, Indra Neil Sarkar, Jiaying Lai

Predicting Relative Populations of Protein Conformations without a Physics Engine Using AlphaFold2

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.25.550545

N/A

0DataRank · unranked

11 citations

Jennifer Y. Cui, David C. Dalgarno, George P. Lisi, Brenda M. Rubenstein, Gabriel Monteiro da Silva

Weighted Ensemble Simulations With the Drude Polarizable Model

Journal of Computational Chemistry(2025)10.1002/jcc.70264

N/A

0DataRank · unranked

1 citations

Gabriel Monteiro da Silva, Brenda M. Rubenstein, Justin A. Lemkul, Marcelo D. Polêto

Predicting the viability of beta-lactamase: How folding and binding free energies correlate with beta-lactamase fitness

PLoS ONE(2020)10.1371/journal.pone.0233509

N/A

0DataRank · unranked

31 citations

Nandita Naik, Jagdish Suresh Patel, C. Scott Wylie, Wenze Gu, Jessie Huang +5 more

Lubricin’s Mucin Domain Has Strong Polyproline Type-II Helical Character

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.15.659778

N/A

0DataRank · unranked

0 citations

Ava Marks, Faith Kim, Mandar T. Naik, Tannin A. Schmidt, Khaled A. Elsaid +3 more

LYRUS: a machine learning model for predicting the pathogenicity of missense variants

Bioinformatics Advances(2021)10.1093/bioadv/vbab045

N/A

0DataRank · unranked

16 citations

Jordan Yang, Ece D. Gamsiz Uzun, Brenda M. Rubenstein, Indra Neil Sarkar, Jiaying Lai

Defining the HIV Capsid Binding Site of Nucleoporin 153

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.06.490988

N/A

0DataRank · unranked

0 citations

Jagdish Suresh Patel, Jordan Yang, Angela Crabtree, Brenda M. Rubenstein, Peik K. Lund-Andersen +3 more