🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Olga Vitek

Northeastern University

ORCID: 0000-0003-1728-1104

Also affiliated with Barnet Hospital, Eastern University, Universidad del Noreste

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “An MSstats workflow for detecting differentially abundant proteins in large-scale data-independent acquisition mass spectrometry experiments with FragPipe processing”.

An MSstats workflow for detecting differentially abundant proteins in large-scale data-independent acquisition mass spectrometry experiments with FragPipe processing

Nature Protocols(2024)10.1038/s41596-024-01000-3

N/A

0.396DataRank · unranked

13 citations

Mateusz Staniak, Fengchao Yu, Alexey I. Nesvizhskii, Olga Vitek, Devon Kohler

Verification of a Blood-Based Targeted Proteomics Signature for Malignant Pleural Mesothelioma

Cancer Epidemiology Biomarkers & Prevention(2020)10.1158/1055-9965.epi-20-0543

N/A

0.330DataRank · unranked

8 citations

Meena Choi, Sara L. Sinicropi-Yao, Katie Lomeo, Joseph M. Amann, Emanuela Felley‐Bosco +7 more

Moving translational mass spectrometry imaging towards transparent and reproducible data analyses: A case study of an urothelial cancer cohort analyzed in the Galaxy framework

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.09.455649

N/A

0.269DataRank · unranked

5 citations

Veronika Volkmann, Kathrin Enderle-Ammour, Konrad Wilhelm, Dan Guo, Olga Vitek +3 more

MSIreg: an R package for unsupervised coregistration of mass spectrometry and H&E images

Bioinformatics(2024)10.1093/bioinformatics/btae624

N/A

0.241DataRank · unranked

4 citations

Andreas Weber, Kylie Ariel Bemis, Verena Stehl, Peter Bronsert, Melanie Christine Föll +2 more

A noise-robust deep clustering of biomolecular ions improves interpretability of mass spectrometric images

Bioinformatics(2023)10.1093/bioinformatics/btad067

N/A

0DataRank · unranked

8 citations

Melanie Christine Föll, Kylie Ariel Bemis, Olga Vitek, Dan Guo

Optimal adjustment sets for causal query estimation in partially observed biomolecular networks

Bioinformatics(2023)10.1093/bioinformatics/btad270

N/A

0DataRank · unranked

6 citations

Vartika Tewari, Rohan Kapre, Ehsan Rahiminasab, Karen Sachs, Charles Tapley Hoyt +3 more

New mixture models for decoy-free false discovery rate estimation in mass spectrometry proteomics

Bioinformatics(2020)10.1093/bioinformatics/btaa807

N/A

0DataRank · unranked

12 citations

Shantanu Jain, Yong Fuga Li, Michal Greguš, Alexander R. Ivanov, Olga Vitek +2 more

MSstatsTMT Improves Accuracy of Thermal Proteome Profiling

Molecular & Cellular Proteomics(2025)10.1016/j.mcpro.2025.100999

N/A

0DataRank · unranked

1 citations

Rohan Kapre, T. Raghavendra Gupta, Yingrong Xu, Clifford G. Phaneuf, Pierre M. Jean Beltran +4 more

Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments

Molecular & Cellular Proteomics(2020)10.1074/mcp.ra119.001792

N/A

0DataRank · unranked

37 citations

Meena Choi, Balázs Bánfai, Yansheng Liu, Brendan MacLean, Tom Dunkley +2 more

A computational framework for the inference of protein complex remodeling from whole-proteome measurements

Nature Methods(2023)10.1038/s41592-023-02011-w

N/A

0DataRank · unranked

18 citations

Amir Banaei‐Esfahani, Peter Blattmann, Fabienne Meier‐Abt, Wenguang Shao, Olga Vitek +3 more

Statistical Detection of Differentially Abundant Proteins in Experiments with Repeated Measures Designs and Isobaric Labeling

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00155

N/A

0DataRank · unranked

14 citations

Mateusz Staniak, Felipe da Veiga Leprevost, Amanda M. Figueroa‐Navedo, Alexander R. Ivanov, Alexey I. Nesvizhskii +3 more