🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Yang Joon Kim

Chan Zuckerberg Biohub San Francisco

ORCID: 0000-0003-1742-5657

Also affiliated with Chan Zuckerberg Initiative (United States)

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
3.6Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data

Nucleic Acids Research(2025)10.1093/nar/gkae1142
Top 6%
3.6DataRank
Top 6%352 citations

Shibla Abdulla, Brian Aevermann, Pedro Assis, Seve Badajoz, Sidney M Bell +48 more

Papers

Driven by 9 papers — median percentile 83. Top paper: “CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data”.

CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data

Nucleic Acids Research(2025)10.1093/nar/gkae1142
Top 6%
3.6DataRank
Top 6%352 citations

Shibla Abdulla, Brian Aevermann, Pedro Assis, Seve Badajoz, Sidney M Bell +48 more

Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis

Nature Communications(2024)10.1038/s41467-024-45665-6
N/A
1.1DataRank · unranked
56 citations

Yang Joon Kim, Gyehyun Lee, I Rusu, Ravi K. Patel, Leah C. Dorman +26 more

Predictive modeling reveals that higher-order cooperativity drives transcriptional repression in a synthetic developmental enhancer

eLife(2022)10.7554/elife.73395
N/A
0.849DataRank · unranked
24 citations

Kaitlin Rhee, Jonathan Liu, Selene Jeammet, Meghan A. Turner, Stephen Small +2 more

CZ CELL×GENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

10.1101/2023.10.30.563174
Top 27%
0.734DataRank
Top 27%132 citations

Shibla Abdulla, Brian D. Aevermann, Pedro Assis, Seve Badajoz, Sidney M. Bell +48 more

A matter of time: Using dynamics and theory to uncover mechanisms of transcriptional bursting

Current Opinion in Cell Biology(2020)10.1016/j.ceb.2020.08.001
N/A
0.706DataRank · unranked
110 citations

Yang Joon Kim, Jiaxi Zhao, Hernán G. García, Nicholas C Lammers

Real-time single-cell characterization of the eukaryotic transcription cycle reveals correlations between RNA initiation, elongation, and cleavage

PLoS Computational Biology(2021)10.1371/journal.pcbi.1008999
N/A
0.529DataRank · unranked
33 citations

Donald Hansen, Elizabeth Eck, Yang Joon Kim, Meghan A. Turner, Simón Álamos +2 more

Optogenetic dissection of transcriptional repression in a multicellular organism

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.20.517211
N/A
0.330DataRank · unranked
8 citations

Nicholas C Lammers, Simón Álamos, Yang Joon Kim, Gabriella Martini, Hernán G. García +1 more

Optogenetic dissection of transcriptional repression in a multicellular organism

Nature Communications(2024)10.1038/s41467-024-53539-0
N/A
0DataRank · unranked
11 citations

Nicholas C Lammers, Simón Álamos, Yang Joon Kim, Gabriella Martini, Hernán G. García +1 more

Real-time single-cell characterization of the eukaryotic transcription cycle reveals correlations between RNA initiation, elongation, and cleavage

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.29.273474
N/A
0DataRank · unranked
10 citations

Donald Hansen, Elizabeth Eck, Yang Joon Kim, Meghan A. Turner, Simón Álamos +2 more