David M. Umulis

ORCID: 0000-0003-1913-2284

Also affiliated with Purdue University West Lafayette, Indiana University – Purdue University Indianapolis

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 18 papers. Top paper: “Diversity and robustness of bone morphogenetic protein pattern formation”.

Diversity and robustness of bone morphogenetic protein pattern formation

Development(2021)10.1242/dev.192344

N/A

0.553DataRank · unranked

39 citations

Mary C. Mullins, David M. Umulis, Aasakiran Madamanchi

Early radial positional information in the cochlea is optimized by a precise linear BMP gradient and enhanced by SOX2

Scientific Reports(2023)10.1038/s41598-023-34725-4

N/A

0.390DataRank · unranked

8 citations

Caryl A. Young, Vidhya Munnamalai, David M. Umulis, Matthew J Thompson

Computational modeling of TGF-β2:TβRI:TβRII receptor complex assembly as mediated by the TGF-β coreceptor betaglycan

Biophysical Journal(2023)10.1016/j.bpj.2023.02.030

N/A

0.385DataRank · unranked

12 citations

Michelle Ingle, Andrew P. Hinck, David M. Umulis, Aasakiran Madamanchi

Atypical peripheral actin band formation via overactivation of RhoA and nonmuscle myosin II in mitofusin 2-deficient cells

eLife(2023)10.7554/elife.88828

N/A

0.208DataRank · unranked

3 citations

Lee D. Troughton, Fan Xu, Aritra Chatterjee, Chang Ding, Han Zhao +15 more

Heterodimer-heterotetramer formation mediates enhanced sensor activity in a biophysical model for BMP signaling

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009422

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0DataRank · unranked

14 citations

Aasakiran Madamanchi, James A. Dutko, Mary C. Mullins, David M. Umulis, Md. Shahriar Karim

Automatic wavelet-based 3D nuclei segmentation and analysis for multicellular embryo quantification

Scientific Reports(2021)10.1038/s41598-021-88966-2

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0DataRank · unranked

11 citations

Xu Wang, Linlin Li, Ye Bu, David M. Umulis, Tzu‐Ching Wu

Quantitative imaging in whole-mount zebrafish embryos traces morphogen gradient maintenance and noise propagation in BMP signaling

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.05.467413

N/A

0DataRank · unranked

2 citations

Linlin Li, Ye Bu, Yixuan Liu, Tzu‐Ching Wu, David M. Umulis +1 more

Quantitative Imaging in Whole-mount Zebrafish Embryos Traces Morphogen Gradient Maintenance and Noise Propagation in BMP Signaling

Research Square(2021)10.21203/rs.3.rs-1122294/v1

N/A

0DataRank · unranked

0 citations

Linlin Li, Ye Bu, Yixuan Liu, Tzu‐Ching Wu, David M. Umulis +1 more

Determining the role of advection in patterning by bone morphogenetic proteins through neural network model-based acceleration of a 3D finite element model of the zebrafish embryo

Frontiers in Systems Biology(2022)10.3389/fsysb.2022.983372

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0DataRank · unranked

10 citations

Xu Wang, Junyi Chai, Xiaoqian Wang, Adrián Buganza Tepole, David M. Umulis +1 more

Early precision of radial patterning of the mouse cochlea is achieved by a linear BMP signaling gradient and is further refined by SOX2

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.30.505910

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0DataRank · unranked

1 citations

Vidhya Munnamalai, David M. Umulis, Matthew J Thompson

3D nuclei segmentation for multi-cellular quantification of zebrafish embryos using NISNet3D

Electronic Imaging(2023)10.2352/ei.2023.35.17.3dia-109

N/A

0DataRank · unranked

0 citations

Liming Wu, Alain Chen, Edward J. Delp, David M. Umulis, Linlin Li

Optimal performance objectives in the highly conserved bone morphogenetic protein signaling pathway

npj Systems Biology and Applications(2024)10.1038/s41540-024-00430-9

N/A

0DataRank · unranked

6 citations

Nissa J. Larson, Jayden Kam, Donny Hanjaya‐Putra, Jeremiah J. Zartman, David M. Umulis +3 more

Optimal Performance Objectives in the Highly Conserved Bone Morphogenetic Protein Signaling Pathway

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.01.578451

N/A

0DataRank · unranked

3 citations

Nissa J. Larson, Donny Hanjaya‐Putra, Jeremiah J. Zartman, David M. Umulis, Linlin Li +2 more

Acceleration of PDE-Based Biological Simulation Through the Development of Neural Network Metamodels

Current Pathobiology Reports(2020)10.1007/s40139-020-00216-8

N/A

0DataRank · unranked

10 citations

Linlin Li, Xu Wang, Adrián Buganza Tepole, David M. Umulis, Lukasz Burzawa

Modeling Epithelial Morphogenesis and Cell Rearrangement during Zebrafish Epiboly: Tissue Deformation, Cell-Cell Coupling, and the Mechanical Response to Stress

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.12.637977

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0DataRank · unranked

1 citations

T. J. Sego, David M. Umulis, Mary C. Mullins, James A. Glazier, Sharon B. Minsuk

Proteolytic Restriction of Chordin Range Underlies BMP Gradient Formation

Cell Reports(2020)10.1016/j.celrep.2020.108039

N/A

0DataRank · unranked

33 citations

Xu Wang, Jonathan Lee Andrade, David M. Umulis, Mary C. Mullins, Francesca B. Tuazon

Mitofusin 2 regulates neutrophil adhesive migration and the actin cytoskeleton

Journal of Cell Science(2020)10.1242/jcs.248880

N/A

0DataRank · unranked

32 citations

Alan Y. Hsu, Yueyang Wang, Ramizah Syahirah, Tianqi Wang, Jacob Jeffries +6 more

WaveletSEG: Automatic wavelet-based 3D nuclei segmentation and analysis for multicellular embryo quantification

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.24.220285

N/A

0DataRank · unranked

1 citations

Xu Wang, Linlin Li, Ye Bu, David M. Umulis, Tzu‐Ching Wu