🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Po‐Ting Lai

National Institutes of Health

ORCID: 0000-0003-2025-318X

Also affiliated with United States National Library of Medicine

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
10.6Author DataRank

Indexed papers

7in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

BioRED: a rich biomedical relation extraction dataset

Briefings in Bioinformatics(2022)10.1093/bib/bbac282
Top 5%
4.3DataRank
Top 5%154 citations

Po‐Ting Lai, Chih-Hsuan Wei, Cecilia N. Arighi, ZHIYONG LU, Ling Luo

Papers

Driven by 19 papers — median percentile 68. Top paper: “BioRED: a rich biomedical relation extraction dataset”.

BioRED: a rich biomedical relation extraction dataset

Briefings in Bioinformatics(2022)10.1093/bib/bbac282
Top 5%
4.3DataRank
Top 5%154 citations

Po‐Ting Lai, Chih-Hsuan Wei, Cecilia N. Arighi, ZHIYONG LU, Ling Luo

PubTator 3.0: an AI-powered literature resource for unlocking biomedical knowledge

Nucleic Acids Research(2024)10.1093/nar/gkae235
Top 6%
3.8DataRank
Top 6%167 citations

Alexis Allot, Po‐Ting Lai, Robert Leaman, Shubo Tian, Ling Luo +5 more

EnzChemRED, a rich enzyme chemistry relation extraction dataset

Scientific Data(2024)10.1038/s41597-024-03835-7
Top 21%
0.945DataRank
Top 21%11 citations

Elisabeth Coudert, Lucila Aimo, Kristian B. Axelsen, Lionel Breuza, Edouard de Castro +14 more

Archive of PubTator 3.0 source code and trained models

PubMed(2024)10.48550/arxiv.2401.11048
Top 32%
0.613DataRank
Top 32%3 citations

Alexis Allot, Po‐Ting Lai, Robert Leaman, Shubo Tian, Ling Luo +5 more

GeneAgent: self-verification language agent for gene-set analysis using domain databases

Nature Methods(2025)10.1038/s41592-025-02748-6
N/A
0.581DataRank · unranked
47 citations

Qiao Jin, Chih-Hsuan Wei, Shubo Tian, Po‐Ting Lai, Qingqing Zhu +5 more

PhenoRerank: A re-ranking model for phenotypic concept recognition pre-trained on human phenotype ontology

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104059
Top 41%
0.469DataRank
Top 41%6 citations

Ling Luo, Po‐Ting Lai, Daniel Veltri, Andrew J. Oler, Sandhya Xirasagar +5 more

Enhancing biomedical relation extraction with directionality

Bioinformatics(2025)10.1093/bioinformatics/btaf226
N/A
0.309DataRank · unranked
5 citations

Chih-Hsuan Wei, Shubo Tian, Robert Leaman, ZHIYONG LU, Po‐Ting Lai

Assessing Artificial Intelligence (AI) Implementation for Assisting Gene Linking (at the National Library of Medicine)

JAMIA Open(2024)10.1093/jamiaopen/ooae129
Top 56%
0.293DataRank
Top 56%3 citations

Chih-Hsuan Wei, Po‐Ting Lai, Melanie Huston, Cathleen Coss, Preeti Gokal Kochar +9 more

The biomedical relationship corpus of the BioRED track at the BioCreative VIII challenge and workshop

Database(2024)10.1093/database/baae071
Top 62%
0.227DataRank
Top 62%3 citations

Chih-Hsuan Wei, Po‐Ting Lai, Ling Luo, Cathleen Coss, Preeti Gokal Kochar +7 more

PhenoTagger: a hybrid method for phenotype concept recognition using human phenotype ontology

Bioinformatics(2021)10.1093/bioinformatics/btab019
N/A
0DataRank · unranked
78 citations

Shankai Yan, Po‐Ting Lai, Daniel Veltri, Andrew J. Oler, Sandhya Xirasagar +5 more

Enhancing Biomedical Relation Extraction with Directionality

arXiv (Cornell University)(2025)10.48550/arxiv.2501.14079
N/A
0DataRank · unranked
0 citations

Chih-Hsuan Wei, Shubo Tian, Robert Leaman, ZHIYONG LU, Po‐Ting Lai

A sequence labeling framework for extracting drug–protein relations from biomedical literature

Database(2022)10.1093/database/baac058
N/A
0DataRank · unranked
4 citations

Po‐Ting Lai, Chih-Hsuan Wei, ZHIYONG LU, Ling Luo

A Sequence Labeling Framework for Extracting Drug-Protein Relations from Biomedical Literature

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.31.486574
N/A
0DataRank · unranked
0 citations

Po‐Ting Lai, Chih-Hsuan Wei, ZHIYONG LU, Ling Luo

Opportunities and challenges for ChatGPT and large language models in biomedicine and health

Briefings in Bioinformatics(2023)10.1093/bib/bbad493
N/A
0DataRank · unranked
354 citations

Qiao Jin, Lana Yeganova, Po‐Ting Lai, Qingqing Zhu, Xiuying Chen +9 more

AIONER: all-in-one scheme-based biomedical named entity recognition using deep learning

Bioinformatics(2023)10.1093/bioinformatics/btad310
N/A
0DataRank · unranked
70 citations

Chih-Hsuan Wei, Po‐Ting Lai, Robert Leaman, Qingyu Chen, ZHIYONG LU +1 more

BioREx: Improving biomedical relation extraction by leveraging heterogeneous datasets

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104487
N/A
0DataRank · unranked
51 citations

Chih-Hsuan Wei, Ling Luo, Qingyu Chen, ZHIYONG LU, Po‐Ting Lai

GNorm2: an improved gene name recognition and normalization system

Bioinformatics(2023)10.1093/bioinformatics/btad599
N/A
0DataRank · unranked
42 citations

Ling Luo, Rezarta Islamaj, Po‐Ting Lai, ZHIYONG LU, Chih-Hsuan Wei

GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases

PubMed(2024)10.48550/arxiv.2405.16205
N/A
0DataRank · unranked
2 citations

Qiao Jin, Chih-Hsuan Wei, Shubo Tian, Po‐Ting Lai, Qingqing Zhu +4 more

Entry-level guide to the use of large language models for medical research

PubMed(2024)10.48550/arxiv.2410.18856
N/A
0DataRank · unranked
2 citations

Nicholas Wan, Robert Leaman, Shubo Tian, Zhizheng Wang, Yifan Yang +18 more